Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung01259 Brassica carinata HOM05D011620 ORTHO05D012398 2.6e-74 282.0 141 100.0
BolC7t44824H Brassica oleracea HOM05D011620 ORTHO05D012398 2.6e-74 282.0 141 100.0
C07p42950 Brassica napus HOM05D011620 ORTHO05D012398 2.2e-73 278.9 141 99.3
A06p35590 Brassica napus HOM05D011620 ORTHO05D012398 5.4e-72 274.2 141 97.9
BraA06t26484Z Brassica rapa HOM05D011620 ORTHO05D012398 5.4e-72 274.2 141 97.9
BcaNung01257 Brassica carinata HOM05D011620 ORTHO05D012398 1.3e-70 269.6 141 94.3
BcaNung01258 Brassica carinata HOM05D011620 ORTHO05D012398 1.3e-70 269.6 141 94.3
Thhalv10004306m.g Eutrema salsugineum HOM05D011620 ORTHO05D012398 4.4e-66 254.6 141 87.9
Sp2g22630 Schrenkiella parvula HOM05D011620 ORTHO05D012398 3.0e-62 241.9 141 85.1
Carub.0006s2267 Capsella rubella HOM05D011620 ORTHO05D012398 1.5e-58 229.6 140 81.4
AL6G36460 Arabidopsis lyrata HOM05D011620 ORTHO05D012398 4.5e-58 228.0 141 78.0
AT5G24820 Arabidopsis thaliana HOM05D011620 ORTHO05D012398 3.8e-57 224.9 142 78.2
CARHR188640 Cardamine hirsuta HOM05D011620 ORTHO05D012398 5.1e-54 214.5 144 74.3
Aa31LG11G4040 Aethionema arabicum HOM05D011620 ORTHO05D012398 1.3e-41 173.3 135 63.7
THA.LOC104814966 Tarenaya hassleriana HOM05D011620 ORTHO05D012398 4.9e-41 171.4 142 59.2
Thhalv10002859m.g Eutrema salsugineum HOM05D000040 ORTHO05D000267 5.0e-09 65.1 128 26.6
TAR633G0039 Trochodendron aralioides HOM05D000040 ORTHO05D012398 8.5e-09 64.3 128 31.2
TAR633G0032 Trochodendron aralioides HOM05D000040 ORTHO05D012398 1.1e-08 63.9 128 31.2
Migut.J00805 Erythranthe guttata HOM05D000040 ORTHO05D004411 2.5e-08 62.8 129 26.4
A07p19050 Brassica napus HOM05D000040 ORTHO05D000267 9.4e-08 60.8 126 27.0
BraA07t29610Z Brassica rapa HOM05D000040 ORTHO05D000267 9.4e-08 60.8 126 27.0
PGR042G1256 Punica granatum HOM05D000040 ORTHO05D000267 2.1e-07 59.7 131 29.0
SpUn0582_0010 Schrenkiella parvula HOM05D000040 ORTHO05D000267 2.1e-07 59.7 126 27.8
BcaB02g10163 Brassica carinata HOM05D000040 ORTHO05D000267 2.7e-07 59.3 126 26.2
THA.LOC104814718 Tarenaya hassleriana HOM05D000040 ORTHO05D004411 3.6e-07 58.9 136 29.4
TAR633G1744 Trochodendron aralioides HOM05D000040 ORTHO05D012398 6.1e-07 58.2 122 27.9
PSO063G4442 Papaver somniferum HOM05D000040 ORTHO05D010772 8.0e-07 57.8 127 27.6
PGR042G1863 Punica granatum HOM05D000040 ORTHO05D000267 8.0e-07 57.8 126 27.8
Migut.B01429 Erythranthe guttata HOM05D000040 ORTHO05D000267 1.8e-06 56.6 126 27.8
Sp7g04610 Schrenkiella parvula HOM05D000040 ORTHO05D006014 2.3e-06 56.2 128 28.1
RhsimUnG0104700 Rhododendron simsii HOM05D000040 ORTHO05D000267 4.0e-06 55.5 132 25.0
Migut.B01427 Erythranthe guttata HOM05D000040 ORTHO05D000267 5.2e-06 55.1 134 27.6
Thhalv10017857m.g Eutrema salsugineum HOM05D000040 ORTHO05D000267 5.2e-06 55.1 135 27.4
TWI77G0672 Tripterygium wilfordii HOM05D000040 ORTHO05D012398 5.2e-06 55.1 125 26.4
CARHR215360 Cardamine hirsuta HOM05D000040 ORTHO05D006014 8.8e-06 54.3 128 28.1
Rhsim03G0267000 Rhododendron simsii HOM05D000040 ORTHO05D004411 8.8e-06 54.3 129 25.6


User provided reference genes

Program Settings