Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 5.5e-173 610.9 316 100.0
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 1.2e-167 593.2 316 96.8
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 1.2e-167 593.2 316 96.8
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 2.6e-167 592.0 316 96.5
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 2.6e-167 592.0 316 96.5
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 5.9e-167 590.9 316 95.9
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 2.9e-158 562.0 317 91.8
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 7.0e-152 540.8 316 87.7
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 2.2e-150 535.8 316 87.7
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 1.6e-148 529.6 316 85.8
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 1.4e-147 526.6 315 87.0
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 1.4e-139 500.0 316 82.9
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 1.8e-136 489.6 316 80.4
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 2.3e-123 446.0 317 74.1
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 2.5e-101 372.9 314 64.0
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 1.2e-100 370.5 314 63.1
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 2.8e-100 369.4 314 62.1
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.1e-99 365.9 315 61.9
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 2.0e-98 363.2 314 62.4
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 5.8e-98 361.7 316 61.4
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 3.7e-97 359.0 315 61.6
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 4.9e-97 358.6 314 61.1
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 1.1e-96 357.5 314 59.9
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 2.4e-96 356.3 319 59.6
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 3.2e-96 355.9 319 59.6
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 5.4e-96 355.1 314 60.5
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 1.2e-95 354.0 319 59.2
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.2e-95 354.0 319 59.2
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 3.5e-95 352.4 315 59.7
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 7.8e-95 351.3 316 60.4
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 1.3e-94 350.5 267 68.9
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 3.9e-94 349.0 316 59.5
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 3.9e-94 349.0 314 59.2
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 6.6e-94 348.2 324 57.4
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 6.6e-94 348.2 313 61.0
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 1.1e-93 347.4 315 59.4
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 1.9e-93 346.7 315 59.0
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 2.5e-93 346.3 316 59.8
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 4.3e-93 345.5 314 58.3
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 4.3e-93 345.5 314 58.3
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 2.1e-92 343.2 317 58.7
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 6.2e-92 341.7 315 59.0
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 6.2e-92 341.7 314 58.9
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 6.2e-92 341.7 313 57.2
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 1.1e-91 340.9 316 58.5
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 6.8e-91 338.2 316 57.6
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 2.0e-90 336.7 352 54.5
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 2.6e-90 336.3 327 56.9
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 3.4e-90 335.9 316 57.9
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 4.4e-90 335.5 315 58.4
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 4.4e-90 335.5 254 66.9
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 7.6e-90 334.7 322 57.5
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 9.9e-90 334.3 314 58.9
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 1.3e-89 334.0 315 57.5
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 1.7e-89 333.6 313 58.1
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 2.9e-89 332.8 280 61.1
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 3.8e-89 332.4 313 58.1
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 3.8e-89 332.4 313 55.9
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 4.9e-89 332.0 316 57.6
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 1.4e-88 330.5 280 60.4
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 1.9e-88 330.1 313 54.3
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 3.2e-88 329.3 316 57.0
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 5.4e-88 328.6 315 56.8
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 7.1e-88 328.2 314 55.4
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 7.1e-88 328.2 315 57.1
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 4.6e-87 325.5 314 55.7
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 1.3e-86 323.9 316 55.7
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.7e-86 323.6 312 55.4
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 2.3e-86 323.2 313 57.8
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 3.0e-86 322.8 315 56.8
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 2.5e-85 319.7 313 54.3
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 3.3e-85 319.3 315 56.2
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 3.6e-84 315.8 316 56.0
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.2e-82 310.8 271 60.5
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 1.7e-81 307.0 313 53.4
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 2.9e-81 306.2 320 54.7
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.2e-80 302.8 314 53.8
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 4.2e-80 302.4 316 54.1
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 1.6e-79 300.4 313 52.1
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 1.0e-78 297.7 316 51.9
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 3.0e-78 296.2 314 52.9
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 1.4e-75 287.3 313 54.0
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 4.0e-75 285.8 313 51.1
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 6.9e-75 285.0 314 52.2
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 2.6e-74 283.1 267 55.1
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 3.4e-74 282.7 265 55.8
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 4.5e-74 282.3 319 52.7
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 1.3e-73 280.8 304 51.3
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 8.4e-73 278.1 317 51.4
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 3.2e-72 276.2 314 51.0
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 6.0e-71 271.9 258 55.4
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 8.7e-70 268.1 278 54.0
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 1.1e-69 267.7 316 50.0
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.5e-69 267.3 261 53.6
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 7.4e-69 265.0 315 49.5
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 2.1e-68 263.5 318 48.1
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.7e-68 262.7 206 65.5
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 5.5e-64 248.8 204 62.3
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 1.8e-62 243.8 276 50.4
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 7.6e-58 228.4 243 53.9
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 1.3e-57 227.6 316 45.3
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 2.6e-50 203.4 314 42.4
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 2.6e-50 203.4 230 49.6
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 2.9e-49 199.9 271 45.0
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 8.5e-49 198.4 299 43.1
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 7.2e-48 195.3 297 39.7
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 1.3e-44 184.5 315 39.0
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 4.1e-43 179.5 187 52.9
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 4.5e-42 176.0 135 68.9
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 1.7e-41 174.1 144 61.1
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 1.4e-40 171.0 277 41.5
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 3.9e-38 162.9 262 37.4
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 7.0e-35 152.1 316 35.8
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 2.0e-34 150.6 264 37.5
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 5.9e-34 149.1 123 62.6
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 1.6e-31 141.0 120 63.3
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 8.8e-30 135.2 106 63.2
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 7.4e-29 132.1 112 65.2
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 1.0e-25 121.7 124 50.0
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.3e-25 121.3 178 42.1
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 2.9e-25 120.2 120 53.3
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 3.8e-25 119.8 196 37.8
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 6.5e-25 119.0 178 41.6
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.4e-22 111.3 319 30.7
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 4.1e-19 99.8 157 38.2
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.6e-18 97.8 145 40.0
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 2.9e-17 93.6 104 50.0
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 7.2e-16 89.0 110 45.5
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 2.1e-15 87.4 110 42.7
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 2.1e-15 87.4 137 40.1
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 1.0e-09 68.6 120 40.0
COL.COLO4_02792 Corchorus olitorius HOM05D000974 ORTHO05D007456 2.3e-06 57.4 81 43.2


User provided reference genes

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