Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung01064 Brassica carinata HOM05D001739 ORTHO05D006605 1.9e-33 145.2 71 100.0
BcaNung01063 Brassica carinata HOM05D001739 ORTHO05D006605 8.0e-24 113.2 55 100.0
A01p14820 Brassica napus HOM05D001739 ORTHO05D006605 7.5e-22 106.7 55 90.9
BraA01t01423Z Brassica rapa HOM05D001739 ORTHO05D006605 7.5e-22 106.7 55 90.9
Sp7g21460 Schrenkiella parvula HOM05D001739 ORTHO05D006605 6.4e-21 103.6 55 89.1
BcaC09g50980 Brassica carinata HOM05D001739 ORTHO05D006605 8.3e-21 103.2 56 91.1
C01p18510 Brassica napus HOM05D001739 ORTHO05D006605 8.3e-21 103.2 56 91.1
BolC1t01774H Brassica oleracea HOM05D001739 ORTHO05D006605 8.3e-21 103.2 56 91.1
CARHR230910 Cardamine hirsuta HOM05D001739 ORTHO05D006605 3.2e-20 101.3 70 71.4
Thhalv10024271m.g Eutrema salsugineum HOM05D001739 ORTHO05D006605 5.4e-20 100.5 70 72.9
Aa31LG6G6730 Aethionema arabicum HOM05D001739 ORTHO05D006605 2.1e-19 98.6 70 71.4
Carub.0007s1775 Capsella rubella HOM05D001739 ORTHO05D006605 2.1e-19 98.6 70 68.6
AL7G29870 Arabidopsis lyrata HOM05D001739 ORTHO05D006605 4.6e-19 97.4 70 68.6
AT4G23540 Arabidopsis thaliana HOM05D001739 ORTHO05D006605 1.7e-18 95.5 70 67.1
THA.LOC104804954 Tarenaya hassleriana HOM05D001739 ORTHO05D006605 1.4e-15 85.9 54 74.1
THA.LOC104806422 Tarenaya hassleriana HOM05D001739 ORTHO05D006605 1.4e-15 85.9 54 74.1
Gohir.A11G312800 Gossypium hirsutum HOM05D001739 ORTHO05D006605 7.8e-11 70.1 69 56.5
Lalb_Chr21g0316501 Lupinus albus HOM05D001739 ORTHO05D006605 1.0e-10 69.7 54 57.4
COL.COLO4_28301 Corchorus olitorius HOM05D001739 ORTHO05D006605 1.3e-10 69.3 54 61.1
TWI74G0913 Tripterygium wilfordii HOM05D001739 ORTHO05D006605 1.3e-10 69.3 54 57.4
Thecc.05G152600 Theobroma cacao HOM05D001739 ORTHO05D006605 2.3e-10 68.6 69 52.2
Ca_26352_v3 Cicer arietinum L. HOM05D001739 ORTHO05D006605 3.0e-10 68.2 54 57.4
Gorai.007G360700 Gossypium raimondii HOM05D001739 ORTHO05D006605 3.9e-10 67.8 69 55.1
CSS0037723 Camellia sinensis var. sinensis HOM05D001739 ORTHO05D006605 8.6e-10 66.6 54 55.6
CANSAT80G2527 Cannabis sativa HOM05D001739 ORTHO05D006605 1.1e-09 66.2 54 61.1
TPR.G29097 Trifolium pratense HOM05D001739 ORTHO05D006605 1.1e-09 66.2 54 57.4
Cfa016809 Carpinus fangiana HOM05D001739 ORTHO05D006605 4.3e-09 64.3 54 57.4
Haze_19848 Corylus avellana HOM05D001739 ORTHO05D006605 4.3e-09 64.3 54 57.4
GSVIVG01033265001 Vitis vinifera HOM05D001739 ORTHO05D006605 4.3e-09 64.3 54 57.4
Psat6g118760 Pisum sativum HOM05D001739 ORTHO05D006605 5.6e-09 63.9 54 55.6
PGR142G2644 Punica granatum HOM05D001739 ORTHO05D006605 9.5e-09 63.2 57 56.1
Atru.chr1.1111 Acer truncatum HOM05D001739 ORTHO05D006605 1.2e-08 62.8 54 57.4
Phvul.007G252200 Phaseolus vulgaris HOM05D001739 ORTHO05D006605 1.2e-08 62.8 54 51.9
Lj5g0016851 Lotus japonicus HOM05D001739 ORTHO05D006605 1.6e-08 62.4 69 44.9
Glyma.02G184900 Glycine max HOM05D001739 ORTHO05D006605 2.1e-08 62.0 54 50.0
CiPaw.09G038800 Carya illinoinensis HOM05D001739 ORTHO05D006605 2.8e-08 61.6 54 57.4
unitig_578.g15982 Utricularia gibba HOM05D001739 ORTHO05D006605 3.6e-08 61.2 51 52.9
arahy.Tifrunner.gnm1.ann1.LXN0TE Arachis hypogaea HOM05D001739 ORTHO05D006605 6.2e-08 60.5 56 48.2
arahy.Tifrunner.gnm1.ann1.R22IQ0 Arachis hypogaea HOM05D001739 ORTHO05D006605 6.2e-08 60.5 56 48.2
Ciclev10006456m.g Citrus clementina HOM05D001739 ORTHO05D006605 8.1e-08 60.1 54 51.9
Eucgr.K01742 Eucalyptus grandis HOM05D001739 ORTHO05D006605 8.1e-08 60.1 54 51.9
SGA_v2.0_scaffold105G30404 Striga asiatica HOM05D001739 ORTHO05D006605 8.1e-08 60.1 51 51.0
Eucgr.K01801 Eucalyptus grandis HOM05D001739 ORTHO05D006605 1.1e-07 59.7 54 51.9
Duzib093G0255 Durio zibethinus HOM05D001739 ORTHO05D006605 1.4e-07 59.3 69 49.3
Lsat_1_v5_gn_9_30560 Lactuca sativa HOM05D001739 ORTHO05D006605 1.4e-07 59.3 54 51.9
Medtr1g053255 Medicago truncatula HOM05D001739 ORTHO05D006605 1.4e-07 59.3 54 51.9
Eucgr.K01988 Eucalyptus grandis HOM05D001739 ORTHO05D006605 1.8e-07 58.9 54 50.0
vmacro07843 Vaccinium macrocarpon HOM05D001739 ORTHO05D006605 1.8e-07 58.9 54 48.1
Potri.006G050000 Populus trichocarpa HOM05D001739 ORTHO05D006605 3.1e-07 58.2 53 50.9
SalBow6G2278 Salvia bowleyana HOM05D001739 ORTHO05D006605 3.1e-07 58.2 51 47.1
Dinv12498 Davidia involucrata HOM05D001739 ORTHO05D006605 4.0e-07 57.8 52 51.9
Nitab4.5_0000586g0090 Nicotiana tabacum HOM05D001739 ORTHO05D006605 4.0e-07 57.8 59 49.2
Nitab4.5_0009615g0010 Nicotiana tabacum HOM05D001739 ORTHO05D006605 4.0e-07 57.8 59 49.2
Peaxi162Scf00130g00214 Petunia axillaris HOM05D001739 ORTHO05D006605 4.0e-07 57.8 54 50.0
VMungo0720G0235 Vigna mungo HOM05D001739 ORTHO05D006605 4.0e-07 57.8 54 48.1
MSTRG.19857 Avicennia marina HOM05D001739 ORTHO05D006605 5.2e-07 57.4 51 47.1
Oeu033011.1 Olea europaea HOM05D001739 ORTHO05D006605 1.2e-06 56.2 50 46.0
FvH4_6g24030 Fragaria vesca HOM05D001739 ORTHO05D006605 1.5e-06 55.8 54 44.4
FAN02G3624 Fragaria x ananassa HOM05D001739 ORTHO05D006605 1.5e-06 55.8 54 44.4
FAN14G2551 Fragaria x ananassa HOM05D001739 ORTHO05D006605 1.5e-06 55.8 54 44.4
Manes.09G020800 Manihot esculenta HOM05D001739 ORTHO05D006605 1.5e-06 55.8 51 54.9
Actinidia09324 Actinidia chinensis HOM05D001739 ORTHO05D006605 2.0e-06 55.5 54 48.1
HanXRQChr10g0296671 Helianthus annuus HOM05D001739 ORTHO05D006605 2.0e-06 55.5 54 48.1
Rhsim03G0025300 Rhododendron simsii HOM05D001739 ORTHO05D006605 2.0e-06 55.5 54 48.1
RcHm_v2.0_Chr3g0482611 Rosa chinensis HOM05D001739 ORTHO05D006605 2.0e-06 55.5 54 48.1
FAN05G1753 Fragaria x ananassa HOM05D001739 ORTHO05D006605 3.4e-06 54.7 54 44.4
Cc06_g17610 Coffea canephora HOM05D001739 ORTHO05D006605 4.4e-06 54.3 56 50.0
Prupe.7G058600 Prunus persica HOM05D001739 ORTHO05D006605 4.4e-06 54.3 54 51.9
QL07p000798 Quercus lobata HOM05D001739 ORTHO05D006605 4.4e-06 54.3 57 49.1
Sed0004072 Sechium edule HOM05D001739 ORTHO05D006605 4.4e-06 54.3 54 51.9
Hma1.2p1_1041F.1_g250970 Hydrangea macrophylla HOM05D001739 ORTHO05D006605 5.8e-06 53.9 56 46.4
Solyc04g015940.3 Solanum lycopersicum HOM05D001739 ORTHO05D006605 9.9e-06 53.1 71 40.8
Sopen04g007950 Solanum pennellii HOM05D001739 ORTHO05D006605 9.9e-06 53.1 71 40.8


User provided reference genes

Program Settings