Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung01037 Brassica carinata HOM05D000977 ORTHO05D010766 8.1e-180 633.6 323 100.0
BcaB05g24521 Brassica carinata HOM05D000977 ORTHO05D013023 5.2e-62 242.3 174 74.1
BcaB08g35410 Brassica carinata HOM05D000977 ORTHO05D001094 2.2e-60 236.9 202 66.3
BcaB01g00648 Brassica carinata HOM05D000977 ORTHO05D010766 3.7e-60 236.1 202 66.3
BcaB07g33258 Brassica carinata HOM05D000977 ORTHO05D010766 9.2e-59 231.5 202 65.3
BcaB01g03497 Brassica carinata HOM05D000977 ORTHO05D010766 1.0e-57 228.0 186 68.8
BcaB06g26215 Brassica carinata HOM05D000977 ORTHO05D013023 4.2e-35 152.9 174 53.4
BcaC01g03907 Brassica carinata HOM05D000977 ORTHO05D001094 9.6e-32 141.7 176 49.4
BcaC07g39392 Brassica carinata HOM05D000977 ORTHO05D013023 3.7e-31 139.8 175 51.4
BcaB06g28222 Brassica carinata HOM05D000977 ORTHO05D001094 1.4e-27 127.9 63 93.7
BcaC09g49956 Brassica carinata HOM05D000977 ORTHO05D001094 6.0e-26 122.5 212 40.6
BolC4t24821H Brassica oleracea HOM05D000977 ORTHO05D010766 5.1e-25 119.4 292 33.9
BcaC04g19918 Brassica carinata HOM05D000977 ORTHO05D013023 8.7e-25 118.6 209 40.2
BcaC04g22155 Brassica carinata HOM05D000977 ORTHO05D001094 4.3e-24 116.3 207 39.6
BcaC09g48661 Brassica carinata HOM05D000267 ORTHO05D010766 4.0e-22 109.8 213 37.6
BcaC05g29185 Brassica carinata HOM05D000977 ORTHO05D010766 6.9e-22 109.0 193 40.4
BcaC09g48943 Brassica carinata HOM05D000977 ORTHO05D001094 6.9e-22 109.0 124 50.0
BcaB08g35676 Brassica carinata HOM05D000977 ORTHO05D001094 9.0e-22 108.6 154 44.2
BcaC06g35099 Brassica carinata HOM05D000977 ORTHO05D010766 2.9e-20 103.6 154 47.4
BcaC04g19757 Brassica carinata HOM05D000977 ORTHO05D010766 8.4e-20 102.1 149 44.3
BcaC08g44032 Brassica carinata HOM05D000977 ORTHO05D010766 3.2e-19 100.1 143 46.2
C02p44180 Brassica napus HOM05D000977 ORTHO05D010766 6.0e-18 95.9 122 50.0
BcaC03g14434 Brassica carinata HOM05D000977 ORTHO05D010766 6.7e-17 92.4 99 54.5
C04p32580 Brassica napus HOM05D000977 ORTHO05D010766 1.1e-16 91.7 143 44.8
BcaC03g16595 Brassica carinata HOM05D000977 ORTHO05D010766 1.4e-14 84.7 95 52.6
A02p27980 Brassica napus HOM05D000977 ORTHO05D010766 1.4e-14 84.7 119 47.1
BolC8t48388H Brassica oleracea HOM05D000977 ORTHO05D001094 3.2e-11 73.6 166 32.5
BcaB05g22284 Brassica carinata HOM05D000977 ORTHO05D001094 4.2e-11 73.2 162 32.7
BcaC09g50760 Brassica carinata HOM05D000977 ORTHO05D013023 9.4e-11 72.0 200 32.0
BcaC08g43135 Brassica carinata HOM05D000977 ORTHO05D001094 2.7e-10 70.5 132 37.9
BcaC09g51962 Brassica carinata HOM05D000977 ORTHO05D001094 2.7e-10 70.5 72 54.2
BraA01t02542Z Brassica rapa HOM05D000977 ORTHO05D010766 2.7e-10 70.5 73 56.2
BraA09t36955Z Brassica rapa HOM05D000977 ORTHO05D010766 2.7e-10 70.5 73 56.2
BcaC07g38007 Brassica carinata HOM05D000977 ORTHO05D001094 4.6e-10 69.7 151 34.4
BcaC02g11317 Brassica carinata HOM05D000977 ORTHO05D001094 6.1e-10 69.3 125 38.4
BolC1t02514H Brassica oleracea HOM05D000977 ORTHO05D001094 1.0e-09 68.6 139 30.2
BraA09t37778Z Brassica rapa HOM05D000977 ORTHO05D010766 1.8e-09 67.8 73 54.8
BraA09t39669Z Brassica rapa HOM05D000977 ORTHO05D010766 1.8e-09 67.8 73 54.8
C06p04160 Brassica napus HOM05D000977 ORTHO05D001094 5.1e-09 66.2 81 48.1
BcaB01g01670 Brassica carinata HOM05D000977 ORTHO05D010766 1.1e-08 65.1 99 47.5
BolC4t24464H Brassica oleracea HOM05D000977 ORTHO05D013023 1.1e-08 65.1 159 34.0
C02p60230 Brassica napus HOM05D000977 ORTHO05D001094 1.3e-07 61.6 146 33.6
BcaC08g46178 Brassica carinata HOM05D000977 ORTHO05D001094 2.2e-07 60.8 159 30.8
BcaC09g51272 Brassica carinata HOM05D000977 ORTHO05D001094 4.8e-07 59.7 84 40.5
C01p47170 Brassica napus HOM05D000977 ORTHO05D010766 6.3e-07 59.3 45 64.4
C01p30920 Brassica napus HOM05D000977 ORTHO05D010766 4.1e-06 56.6 45 62.2
BcaB03g12598 Brassica carinata HOM05D039440 ORTHO05D001094 5.3e-06 56.2 110 36.4
C01p30780 Brassica napus HOM05D000977 ORTHO05D010766 5.3e-06 56.2 144 31.9
C07p19820 Brassica napus HOM05D000977 ORTHO05D010766 5.3e-06 56.2 45 64.4
BcaC05g27321 Brassica carinata HOM05D000977 ORTHO05D010766 6.9e-06 55.8 45 64.4
BcaB05g22218 Brassica carinata HOM05D000977 ORTHO05D001094 9.1e-06 55.5 83 39.8
BcaNung06985 Brassica carinata HOM05D000977 ORTHO05D001094 9.1e-06 55.5 83 39.8


User provided reference genes

Program Settings