Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung01018 Brassica carinata HOM05D001031 ORTHO05D000857 5.6e-86 320.9 157 100.0
BraA03t14455Z Brassica rapa HOM05D001031 ORTHO05D000857 5.3e-36 154.8 303 38.6
C07p52260 Brassica napus HOM05D001031 ORTHO05D000857 1.6e-35 153.3 303 38.3
BolC7t45720H Brassica oleracea HOM05D001031 ORTHO05D000857 1.6e-35 153.3 303 38.3
A03p53860 Brassica napus HOM05D001031 ORTHO05D000857 3.5e-35 152.1 303 38.3
CARHR229940 Cardamine hirsuta HOM05D001031 ORTHO05D000857 1.8e-31 139.8 309 35.9
BcaNung01662 Brassica carinata HOM05D001031 ORTHO05D000857 1.7e-29 133.3 305 36.1
BcaNung01663 Brassica carinata HOM05D001031 ORTHO05D000857 1.7e-29 133.3 305 36.1
Carub.0007s1838 Capsella rubella HOM05D001031 ORTHO05D000857 1.4e-28 130.2 304 36.2
AL7G30620 Arabidopsis lyrata HOM05D001031 ORTHO05D000857 1.8e-28 129.8 305 35.4
Thhalv10027461m.g Eutrema salsugineum HOM05D001031 ORTHO05D000857 9.1e-28 127.5 303 35.3
AT4G22900 Arabidopsis thaliana HOM05D001031 ORTHO05D000857 3.2e-25 119.0 306 34.3
Sp7g20970 Schrenkiella parvula HOM05D001031 ORTHO05D000857 1.5e-22 110.2 253 37.5
Aa31LG6G4970 Aethionema arabicum HOM05D001031 ORTHO05D000857 2.3e-15 86.3 284 30.6
Thhalv10029314m.g Eutrema salsugineum HOM05D001031 ORTHO05D000857 4.0e-15 85.5 156 39.1
CARHR254340 Cardamine hirsuta HOM05D001031 ORTHO05D000857 5.2e-15 85.1 156 42.9
A01p14120 Brassica napus HOM05D001031 ORTHO05D027116 8.9e-15 84.3 59 71.2
C01p17380 Brassica napus HOM05D037734 ORTHO05D027116 3.4e-14 82.4 75 62.7
THA.LOC104814149 Tarenaya hassleriana HOM05D001031 ORTHO05D000857 9.8e-14 80.9 136 39.0
AL8G33770 Arabidopsis lyrata HOM05D001031 ORTHO05D000857 1.7e-13 80.1 155 40.0
AT4G11950 Arabidopsis thaliana HOM05D001031 ORTHO05D000857 2.2e-13 79.7 155 38.7
Carub.0006s3105 Capsella rubella HOM05D001031 ORTHO05D000857 4.9e-13 78.6 155 41.9
Sp6g05560 Schrenkiella parvula HOM05D001031 ORTHO05D000857 7.0e-12 74.7 153 37.3
AL6G46720 Arabidopsis lyrata HOM05D001031 ORTHO05D000857 1.6e-11 73.6 156 36.5
THA.LOC104806357 Tarenaya hassleriana HOM05D001031 ORTHO05D000857 2.7e-11 72.8 165 37.6
BcaC04g21179 Brassica carinata HOM05D001031 ORTHO05D000857 4.3e-09 65.5 132 36.4
BraA09t38286Z Brassica rapa HOM05D001031 ORTHO05D000857 6.1e-08 61.6 49 65.3
BcaC04g21181 Brassica carinata HOM05D001031 ORTHO05D000857 1.0e-07 60.8 37 75.7
A09p27180 Brassica napus HOM05D001031 ORTHO05D000857 1.0e-07 60.8 37 75.7
C09p34500 Brassica napus HOM05D001031 ORTHO05D000857 1.0e-07 60.8 37 75.7
BolC9t56294H Brassica oleracea HOM05D001031 ORTHO05D000857 1.0e-07 60.8 37 75.7
Duzib205G1613 Durio zibethinus HOM05D001031 ORTHO05D000857 1.8e-07 60.1 116 36.2
Aa31LG9G10520 Aethionema arabicum HOM05D001031 ORTHO05D000857 2.3e-07 59.7 149 35.6
MSTRG.12033 Avicennia marina HOM05D001031 ORTHO05D000857 2.3e-07 59.7 129 35.7
TWI60G0074 Tripterygium wilfordii HOM05D001031 ORTHO05D000857 2.3e-07 59.7 127 37.0
MSTRG.1909 Avicennia marina HOM05D001031 ORTHO05D000857 4.0e-07 58.9 122 36.9
FvH4_5g01210 Fragaria vesca HOM05D001031 ORTHO05D000857 4.0e-07 58.9 146 33.6
FAN18G3641 Fragaria x ananassa HOM05D001031 ORTHO05D000857 4.0e-07 58.9 146 33.6
Eucgr.D01942 Eucalyptus grandis HOM05D001031 ORTHO05D000857 5.2e-07 58.5 117 38.5
FAN08G2622 Fragaria x ananassa HOM05D001031 ORTHO05D000857 8.9e-07 57.8 146 32.9
FAN04G0527 Fragaria x ananassa HOM05D001031 ORTHO05D000857 1.2e-06 57.4 146 32.9
AL1G18010 Arabidopsis lyrata HOM05D001031 ORTHO05D000857 1.5e-06 57.0 160 33.8
Gohir.D09G187900 Gossypium hirsutum HOM05D001031 ORTHO05D000857 1.5e-06 57.0 130 34.6
Gorai.006G210700 Gossypium raimondii HOM05D001031 ORTHO05D000857 2.0e-06 56.6 130 34.6
Aqoxy7G00503 Aquilegia oxysepala HOM05D001031 ORTHO05D000857 2.6e-06 56.2 118 35.6
Gohir.A09G193700 Gossypium hirsutum HOM05D001031 ORTHO05D000857 2.6e-06 56.2 130 36.2
RcHm_v2.0_Chr7g0199881 Rosa chinensis HOM05D001031 ORTHO05D000857 2.6e-06 56.2 146 32.9
arahy.Tifrunner.gnm1.ann1.K5BFLR Arachis hypogaea HOM05D001031 ORTHO05D000857 4.4e-06 55.5 140 34.3
CANSAT21G0026 Cannabis sativa HOM05D001031 ORTHO05D000857 4.4e-06 55.5 131 30.5
FAN13G2178 Fragaria x ananassa HOM05D001031 ORTHO05D000857 5.8e-06 55.1 146 32.2
MBI11_g11980_MAGBIO Magnolia biondii HOM05D001031 ORTHO05D000857 7.5e-06 54.7 161 32.3
Cc08_g13750 Coffea canephora HOM05D001031 ORTHO05D000857 9.8e-06 54.3 128 32.8
Dinv39037 Davidia involucrata HOM05D001031 ORTHO05D000857 9.8e-06 54.3 122 32.8


User provided reference genes

Program Settings