Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung00672 Brassica carinata HOM05D005368 ORTHO05D006417 1.6e-64 249.2 118 100.0
BcaNung00675 Brassica carinata HOM05D005368 ORTHO05D006417 1.6e-64 249.2 118 100.0
C01p04120 Brassica napus HOM05D005368 ORTHO05D006417 1.6e-64 249.2 118 100.0
BcaB03g11818 Brassica carinata HOM05D005368 ORTHO05D006417 7.7e-64 246.9 118 98.3
A01p03810 Brassica napus HOM05D005368 ORTHO05D006417 7.7e-64 246.9 118 98.3
A08p16660 Brassica napus HOM05D005368 ORTHO05D006417 7.7e-64 246.9 118 98.3
BraA01t00366Z Brassica rapa HOM05D005368 ORTHO05D006417 7.7e-64 246.9 118 98.3
BcaNung07080 Brassica carinata HOM05D005368 ORTHO05D006417 2.9e-63 245.0 118 97.5
A03p63090 Brassica napus HOM05D005368 ORTHO05D006417 2.9e-63 245.0 118 97.5
BolC7t46501H Brassica oleracea HOM05D005368 ORTHO05D006417 2.9e-63 245.0 118 97.5
BraA03t15384Z Brassica rapa HOM05D005368 ORTHO05D006417 2.9e-63 245.0 118 97.5
C07p60710 Brassica napus HOM05D005368 ORTHO05D006417 8.6e-63 243.4 118 96.6
Carub.0007s0559 Capsella rubella HOM05D005368 ORTHO05D006417 1.1e-62 243.0 118 96.6
AL7G16500 Arabidopsis lyrata HOM05D005368 ORTHO05D006417 1.9e-62 242.3 118 96.6
Sp7g32480 Schrenkiella parvula HOM05D005368 ORTHO05D006417 2.5e-62 241.9 118 95.8
AT4G34700 Arabidopsis thaliana HOM05D005368 ORTHO05D006417 5.6e-62 240.7 118 95.8
BcaC01g00883 Brassica carinata HOM05D005368 ORTHO05D006417 9.5e-62 240.0 117 96.6
C03p85580 Brassica napus HOM05D005368 ORTHO05D006417 2.1e-61 238.8 118 94.9
CARHR243000 Cardamine hirsuta HOM05D005368 ORTHO05D006417 2.8e-61 238.4 118 95.8
Aa31LG2G15810 Aethionema arabicum HOM05D005368 ORTHO05D006417 1.2e-59 233.0 118 91.5
BraA08t33631Z Brassica rapa HOM05D005368 ORTHO05D006417 1.7e-58 229.2 153 75.8
BolC1t00400H Brassica oleracea HOM05D005368 ORTHO05D006417 1.2e-56 223.0 110 95.5
THA.LOC104819629 Tarenaya hassleriana HOM05D005368 ORTHO05D006417 1.0e-55 219.9 118 85.6
Duzib132G1204 Durio zibethinus HOM05D005368 ORTHO05D006417 4.0e-52 208.0 116 81.9
Gohir.D12G031300 Gossypium hirsutum HOM05D005368 ORTHO05D006417 6.8e-52 207.2 116 81.0
Gorai.008G032000 Gossypium raimondii HOM05D005368 ORTHO05D006417 6.8e-52 207.2 116 81.0
CiPaw.06G128000 Carya illinoinensis HOM05D005368 ORTHO05D006417 8.9e-52 206.8 116 81.9
Thecc.02G075100 Theobroma cacao HOM05D005368 ORTHO05D006417 8.9e-52 206.8 116 81.0
Duzib052G0771 Durio zibethinus HOM05D005368 ORTHO05D006417 2.0e-51 205.7 116 81.0
Gohir.A03G199300 Gossypium hirsutum HOM05D005368 ORTHO05D006417 2.6e-51 205.3 116 81.0
Gohir.A12G041100 Gossypium hirsutum HOM05D005368 ORTHO05D006417 3.4e-51 204.9 116 80.2
Gohir.D02G220600 Gossypium hirsutum HOM05D005368 ORTHO05D006417 3.4e-51 204.9 116 81.0
GSVIVG01024171001 Vitis vinifera HOM05D005368 ORTHO05D006417 3.4e-51 204.9 112 82.1
CiPaw.05G073300 Carya illinoinensis HOM05D005368 ORTHO05D006417 7.5e-51 203.8 116 81.0
Gorai.005G248500 Gossypium raimondii HOM05D005368 ORTHO05D006417 7.5e-51 203.8 116 80.2
RcHm_v2.0_Chr6g0267931 Rosa chinensis HOM05D005368 ORTHO05D006417 1.3e-50 203.0 116 79.3
FvH4_2g10430 Fragaria vesca HOM05D005368 ORTHO05D006417 2.2e-50 202.2 116 79.3
FAN24G2358 Fragaria x ananassa HOM05D005368 ORTHO05D006417 2.2e-50 202.2 116 79.3
Haze_02245 Corylus avellana HOM05D005368 ORTHO05D006417 2.9e-50 201.8 116 80.2
CANSAT11G1177 Cannabis sativa HOM05D005368 ORTHO05D006417 3.7e-50 201.4 112 82.1
Cfa005111 Carpinus fangiana HOM05D005368 ORTHO05D006417 3.7e-50 201.4 116 80.2
Sed0023703 Sechium edule HOM05D005368 ORTHO05D006417 3.7e-50 201.4 116 79.3
Atru.chr5.3143 Acer truncatum HOM05D005368 ORTHO05D006417 4.9e-50 201.1 115 80.0
CsaV3_2G015290 Cucumis sativus L. HOM05D005368 ORTHO05D006417 4.9e-50 201.1 116 78.4
FAN20G0372 Fragaria x ananassa HOM05D005368 ORTHO05D006417 6.4e-50 200.7 116 78.4
COL.COLO4_26045 Corchorus olitorius HOM05D005368 ORTHO05D006417 1.4e-49 199.5 114 79.8
Haze_02248 Corylus avellana HOM05D005368 ORTHO05D006417 1.4e-49 199.5 115 80.0
FAN27G2088 Fragaria x ananassa HOM05D005368 ORTHO05D006417 1.4e-49 199.5 116 77.6
Manes.04G083400 Manihot esculenta HOM05D005368 ORTHO05D006417 1.4e-49 199.5 113 78.8
FAN15G3179 Fragaria x ananassa HOM05D005368 ORTHO05D006417 2.4e-49 198.7 116 78.4
Lalb_Chr11g0061301 Lupinus albus HOM05D005368 ORTHO05D006417 2.4e-49 198.7 116 79.3
MD00G1086200 Malus domestica HOM05D005368 ORTHO05D006417 3.2e-49 198.4 116 78.4
Sed0006755 Sechium edule HOM05D005368 ORTHO05D006417 3.2e-49 198.4 114 79.8
Glyma.04G008100 Glycine max HOM05D005368 ORTHO05D006417 1.2e-48 196.4 112 81.2
HanXRQChr15g0478311 Helianthus annuus HOM05D005368 ORTHO05D006417 1.2e-48 196.4 116 78.4
Lalb_Chr08g0246711 Lupinus albus HOM05D005368 ORTHO05D006417 1.6e-48 196.1 112 79.5
Aqoxy5G01478 Aquilegia oxysepala HOM05D005368 ORTHO05D006417 2.7e-48 195.3 111 80.2
Prupe.8G083900 Prunus persica HOM05D005368 ORTHO05D006417 2.7e-48 195.3 116 77.6
PGR042G2956 Punica granatum HOM05D005368 ORTHO05D006417 2.7e-48 195.3 115 74.8
Migut.N01277 Erythranthe guttata HOM05D005368 ORTHO05D006417 3.5e-48 194.9 113 77.9
Glyma.06G007900 Glycine max HOM05D005368 ORTHO05D006417 3.5e-48 194.9 112 80.4
Hma1.2p1_0032F.1_g020120 Hydrangea macrophylla HOM05D005368 ORTHO05D006417 3.5e-48 194.9 112 78.6
Manes.11G081900 Manihot esculenta HOM05D005368 ORTHO05D006417 3.5e-48 194.9 113 77.9
Nn5g29240 Nelumbo nucifera HOM05D005368 ORTHO05D006417 3.5e-48 194.9 111 78.4
CSS0039837 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 4.6e-48 194.5 113 77.0
TAR376G0297 Trochodendron aralioides HOM05D005368 ORTHO05D006417 4.6e-48 194.5 111 80.2
ECA246G1492 Erigeron canadensis HOM05D005368 ORTHO05D006417 6.0e-48 194.1 112 77.7
CSS0032904 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 1.3e-47 193.0 113 76.1
Cc02_g16910 Coffea canephora HOM05D005368 ORTHO05D006417 1.3e-47 193.0 113 77.0
Nitab4.5_0005266g0100 Nicotiana tabacum HOM05D005368 ORTHO05D006417 1.3e-47 193.0 115 75.7
Ciclev10029601m.g Citrus clementina HOM05D005368 ORTHO05D006417 1.7e-47 192.6 117 75.2
MSTRG.27675 Avicennia marina HOM05D005368 ORTHO05D006417 2.3e-47 192.2 113 76.1
CAN.G170.100 Capsicum annuum HOM05D005368 ORTHO05D006417 2.3e-47 192.2 115 74.8
Gorai.002G149100 Gossypium raimondii HOM05D005368 ORTHO05D006417 3.0e-47 191.8 118 76.3
Nitab4.5_0001317g0060 Nicotiana tabacum HOM05D005368 ORTHO05D006417 3.0e-47 191.8 115 76.5
CDE02G1335 Ceratophyllum demersum HOM05D000240 ORTHO05D001140 3.9e-47 191.4 116 75.0
Lj3g0011506 Lotus japonicus HOM05D005368 ORTHO05D006417 5.0e-47 191.0 113 77.0
Hund00179 Selenicereus undatus HOM05D005368 ORTHO05D006417 5.0e-47 191.0 112 74.1
Hund00187 Selenicereus undatus HOM05D005368 ORTHO05D006417 5.0e-47 191.0 112 74.1
ClCG11G003860 Citrullus lanatus HOM05D005368 ORTHO05D006417 6.6e-47 190.7 116 76.7
VMungo1309G2922 Vigna mungo HOM05D005368 ORTHO05D006417 6.6e-47 190.7 112 77.7
Medtr3g117550 Medicago truncatula HOM05D005368 ORTHO05D006417 8.6e-47 190.3 116 74.1
TWI79G1074 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 8.6e-47 190.3 115 73.9
Ca_15334_v3 Cicer arietinum L. HOM05D005368 ORTHO05D006417 1.5e-46 189.5 113 75.2
Potri.009G124600 Populus trichocarpa HOM05D005368 ORTHO05D006417 1.5e-46 189.5 113 76.1
TWI31G1415 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 1.5e-46 189.5 115 75.7
Potri.004G163000 Populus trichocarpa HOM05D005368 ORTHO05D006417 1.9e-46 189.1 116 73.3
Hund06283 Selenicereus undatus HOM05D005368 ORTHO05D006417 2.5e-46 188.7 112 71.4
Solyc01g110390.2 Solanum lycopersicum HOM05D005368 ORTHO05D006417 3.3e-46 188.3 115 73.0
MSTRG.20040 Avicennia marina HOM05D005368 ORTHO05D006417 4.3e-46 188.0 112 75.0
MD10G1063100 Malus domestica HOM05D005368 ORTHO05D006417 7.3e-46 187.2 116 75.0
Psat5g003920 Pisum sativum HOM05D005368 ORTHO05D006417 7.3e-46 187.2 113 74.3
MELO3C023357.2 Cucumis melo HOM05D005368 ORTHO05D006417 9.5e-46 186.8 116 75.9
PSO210G0115 Papaver somniferum HOM05D005368 ORTHO05D006417 9.5e-46 186.8 111 76.6
PSO170G4570 Papaver somniferum HOM05D005368 ORTHO05D006417 1.2e-45 186.4 111 75.7
Peaxi162Scf00016g00038 Petunia axillaris HOM05D005368 ORTHO05D006417 1.6e-45 186.0 115 72.2
SGA_v2.0_scaffold207G41877 Striga asiatica HOM05D005368 ORTHO05D006417 1.6e-45 186.0 112 73.2
MBI18_g13600_MAGBIO Magnolia biondii HOM05D005368 ORTHO05D006417 2.1e-45 185.7 113 74.3
HPP92_012929 Vanilla planifolia HOM05D005368 ORTHO05D006417 8.1e-45 183.7 111 74.8
TWI75G0748 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 1.4e-44 183.0 115 73.0
Os06g0714100 Oryza sativa ssp. japonica HOM05D005368 ORTHO05D006417 1.8e-44 182.6 111 74.8
Thhalv10026594m.g Eutrema salsugineum HOM05D005368 ORTHO05D006417 3.1e-44 181.8 118 77.1
Phvul.009G002900 Phaseolus vulgaris HOM05D005368 ORTHO05D006417 3.1e-44 181.8 112 75.9
Ah.01g006460 Amaranthus hybridus HOM05D005368 ORTHO05D006417 5.2e-44 181.0 113 69.0
QL11p046417 Quercus lobata HOM05D005368 ORTHO05D006417 6.8e-44 180.6 137 63.5
AUR62016830 Chenopodium quinoa HOM05D005368 ORTHO05D006417 9.8e-43 176.8 104 73.1
AUR62010388 Chenopodium quinoa HOM05D005368 ORTHO05D006417 1.3e-42 176.4 104 73.1
Nitab4.5_0010630g0030 Nicotiana tabacum HOM05D005368 ORTHO05D006417 4.9e-42 174.5 104 78.8
Ah.01g018810 Amaranthus hybridus HOM05D005368 ORTHO05D006417 1.4e-41 172.9 103 72.8
SalBow3G2013 Salvia bowleyana HOM05D005368 ORTHO05D006417 1.4e-41 172.9 102 77.5
MD00G1117500 Malus domestica HOM05D005368 ORTHO05D006417 3.2e-41 171.8 116 70.7
Gohir.D13G096825 Gossypium hirsutum HOM05D005368 ORTHO05D006417 4.1e-41 171.4 105 74.3
Lsat_1_v5_gn_3_44180 Lactuca sativa HOM05D005368 ORTHO05D006417 5.4e-41 171.0 104 75.0
ATR0149G005 Amborella trichopoda HOM05D005368 ORTHO05D006417 3.5e-40 168.3 110 70.0
EL10Ac9g21636 Beta vulgaris HOM05D005368 ORTHO05D006417 6.0e-40 167.5 101 71.3
Sc08g0000900 Simmondsia chinensis HOM05D005368 ORTHO05D006417 6.0e-40 167.5 105 68.6
Oeu046129.2 Olea europaea HOM05D005368 ORTHO05D006417 1.5e-38 162.9 121 64.5
TPR.G32174 Trifolium pratense HOM05D005368 ORTHO05D006417 3.3e-38 161.8 180 48.3
Dinv23453 Davidia involucrata HOM05D005368 ORTHO05D006417 4.3e-38 161.4 96 78.1
Zm00001eb227940 Zea mays HOM05D005368 ORTHO05D006417 2.8e-37 158.7 101 70.3
CDE04G1205 Ceratophyllum demersum HOM05D005368 ORTHO05D006417 3.4e-35 151.8 91 78.0
Nitab4.5_0005932g0060 Nicotiana tabacum HOM05D005368 ORTHO05D006417 7.6e-35 150.6 115 64.3
Actinidia02246 Actinidia chinensis HOM05D005368 ORTHO05D006417 1.6e-32 142.9 115 62.6
Mapoly0002s0197 Marchantia polymorpha HOM05D005368 ORTHO05D006417 2.7e-32 142.1 112 58.0
Pp3c6_19130 Physcomitrium patens HOM05D005368 ORTHO05D006417 1.0e-31 140.2 113 54.0
SEGI_21378 Sequoiadendron giganteum HOM05D005368 ORTHO05D006417 4.3e-30 134.8 111 54.1
PGSC0003DMG400005571 Solanum tuberosum HOM05D005368 ORTHO05D006417 2.1e-29 132.5 85 70.6
AagrBONN_evm.TU.Sc2ySwM_368.1500 Anthoceros agrestis HOM05D005368 ORTHO05D006417 5.2e-28 127.9 109 51.4
CBR_g22898 Chara braunii HOM05D000019 ORTHO05D000048 2.7e-24 115.5 114 49.1
BolC3t20846H Brassica oleracea HOM05D005368 ORTHO05D006417 4.6e-24 114.8 58 98.3
SMO159G0001 Selaginella moellendorffii HOM05D005368 ORTHO05D006417 2.3e-23 112.5 103 51.5
Eucgr.G01730 Eucalyptus grandis HOM05D005368 ORTHO05D006417 8.7e-23 110.5 58 77.6
HanXRQChr10g0292781 Helianthus annuus HOM05D005368 ORTHO05D006417 8.7e-23 110.5 91 59.3
SMO223G0026 Selaginella moellendorffii HOM05D000032 ORTHO05D004142 1.1e-22 110.2 105 51.4
Gohir.A13G090800 Gossypium hirsutum HOM05D005368 ORTHO05D006417 5.6e-22 107.8 85 62.4
Lj5C189G13 Lonicera japonica HOM05D006147 ORTHO05D007501 1.6e-21 106.3 60 73.3
Sopen01g052540 Solanum pennellii HOM05D005368 ORTHO05D006417 2.8e-21 105.5 57 77.2
BcaNung04613 Brassica carinata HOM05D005368 ORTHO05D006417 4.8e-21 104.8 55 89.1
unitig_60.g25866 Utricularia gibba HOM05D005368 ORTHO05D006417 1.5e-19 99.8 113 47.8
BcaNung02377 Brassica carinata HOM05D005368 ORTHO05D006417 2.2e-18 95.9 47 91.5
CSS0005721 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 2.2e-18 95.9 58 70.7
MCO15G169 Micromonas commoda HOM05D005368 ORTHO05D006417 1.1e-17 93.6 96 46.9
Oeu020711.1 Olea europaea HOM05D005368 ORTHO05D006417 4.2e-17 91.7 152 38.2
HanXRQChr17g0544121 Helianthus annuus HOM05D005368 ORTHO05D006417 4.6e-16 88.2 58 77.6
Migut.B00174 Erythranthe guttata HOM05D005368 ORTHO05D006417 6.0e-16 87.8 55 74.5
MD05G1026100 Malus domestica HOM05D005333 ORTHO05D005776 9.6e-14 80.5 79 54.4
Cre11.g467668 Chlamydomonas reinhardtii HOM05D005368 ORTHO05D006417 1.1e-09 67.0 99 35.4


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