Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung00587 Brassica carinata HOM05D000440 ORTHO05D096162 4.6e-64 248.1 157 100.0
BcaNung00589 Brassica carinata HOM05D000440 ORTHO05D000295 1.7e-10 70.1 78 71.8
BcaNung00590 Brassica carinata HOM05D000440 ORTHO05D000295 1.7e-10 70.1 78 71.8
C01p03460 Brassica napus HOM05D000440 ORTHO05D000295 1.7e-10 70.1 78 71.8
BolC1t00333H Brassica oleracea HOM05D000440 ORTHO05D000295 1.7e-10 70.1 78 71.8
BcaNung03631 Brassica carinata HOM05D000440 ORTHO05D000295 3.8e-10 68.9 78 82.1
BraA01t00295Z Brassica rapa HOM05D000440 ORTHO05D000295 3.8e-10 68.9 78 74.4
A01p03110 Brassica napus HOM05D000440 ORTHO05D000295 1.5e-09 67.0 78 75.6
BcaB03g12414 Brassica carinata HOM05D000440 ORTHO05D000295 3.3e-09 65.9 78 59.0
Sp7g33260 Schrenkiella parvula HOM05D000440 ORTHO05D000295 3.3e-09 65.9 78 62.8
Thhalv10027339m.g Eutrema salsugineum HOM05D000440 ORTHO05D000295 5.6e-09 65.1 78 66.7
BcaNung02394 Brassica carinata HOM05D000440 ORTHO05D000295 7.3e-09 64.7 89 48.3
A03p63590 Brassica napus HOM05D000440 ORTHO05D000295 7.3e-09 64.7 89 48.3
C07p61170 Brassica napus HOM05D000440 ORTHO05D000295 7.3e-09 64.7 89 48.3
BolC7t46541H Brassica oleracea HOM05D000440 ORTHO05D000295 7.3e-09 64.7 89 48.3
BraA03t15430Z Brassica rapa HOM05D000440 ORTHO05D000295 7.3e-09 64.7 89 48.3
BolC3t20314H Brassica oleracea HOM05D000440 ORTHO05D000295 1.2e-08 63.9 78 65.4
BcaNung02395 Brassica carinata HOM05D000440 ORTHO05D000295 1.6e-08 63.5 79 62.0
A08p21850 Brassica napus HOM05D000440 ORTHO05D000295 1.6e-08 63.5 78 59.0
BraA08t34138Z Brassica rapa HOM05D000440 ORTHO05D000295 1.6e-08 63.5 78 56.4
C03p80700 Brassica napus HOM05D000440 ORTHO05D000295 2.8e-08 62.8 78 62.8
BcaC01g00498 Brassica carinata HOM05D000440 ORTHO05D000295 3.6e-08 62.4 78 62.8
AL7G15690 Arabidopsis lyrata HOM05D000440 ORTHO05D000295 3.0e-07 59.3 78 59.0
Aa31LG6G12450 Aethionema arabicum HOM05D000440 ORTHO05D000295 1.2e-06 57.4 78 61.5
AT4G35480 Arabidopsis thaliana HOM05D000440 ORTHO05D000295 1.2e-06 57.4 78 55.1
BcaNung00588 Brassica carinata HOM05D000440 ORTHO05D000295 1.2e-06 57.4 47 70.2
Carub.0007s0483 Capsella rubella HOM05D000440 ORTHO05D000295 1.5e-06 57.0 63 66.7
CARHR243810 Cardamine hirsuta HOM05D000440 ORTHO05D000295 9.8e-06 54.3 78 50.0


User provided reference genes

Program Settings