Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung00513 Brassica carinata HOM05D006945 ORTHO05D005549 2.1e-66 255.4 112 100.0
BcaNung00514 Brassica carinata HOM05D006945 ORTHO05D005549 2.1e-66 255.4 112 100.0
C07p57440 Brassica napus HOM05D006945 ORTHO05D005549 4.5e-53 211.1 112 81.2
BolC7t46212H Brassica oleracea HOM05D006945 ORTHO05D005549 4.5e-53 211.1 112 81.2
BolC6t36787H Brassica oleracea HOM05D006945 ORTHO05D005549 1.3e-49 199.5 110 76.4
A03p59240 Brassica napus HOM05D006945 ORTHO05D005549 5.1e-49 197.6 110 75.5
A03p59420 Brassica napus HOM05D006945 ORTHO05D005549 6.7e-49 197.2 110 74.5
BcaC08g44188 Brassica carinata HOM05D006945 ORTHO05D005549 4.3e-48 194.5 112 75.0
BraA03t14998Z Brassica rapa HOM05D006945 ORTHO05D005549 4.3e-48 194.5 110 74.5
C06p15950 Brassica napus HOM05D006945 ORTHO05D005549 1.4e-46 189.5 102 78.4
Thhalv10026566m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 2.5e-40 168.7 110 65.5
BcaNung02932 Brassica carinata HOM05D006945 ORTHO05D005549 4.1e-38 161.4 112 61.6
CARHR237970 Cardamine hirsuta HOM05D006945 ORTHO05D005549 1.0e-36 156.8 111 59.5
BcaNung02066 Brassica carinata HOM05D006945 ORTHO05D005549 2.2e-36 155.6 112 62.5
BcaNung02068 Brassica carinata HOM05D006945 ORTHO05D005549 2.2e-36 155.6 112 62.5
BolC7t46664H Brassica oleracea HOM05D006945 ORTHO05D005549 2.2e-36 155.6 111 64.0
AL7G22140 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 1.9e-35 152.5 110 60.0
C07p62500 Brassica napus HOM05D006945 ORTHO05D005549 2.5e-35 152.1 110 62.7
AT4G30070 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 9.4e-35 150.2 112 58.0
Carub.0007s1058 Capsella rubella HOM05D006945 ORTHO05D005549 1.0e-33 146.7 115 56.5
Carub.0004s0716 Capsella rubella HOM05D006945 ORTHO05D005549 8.8e-33 143.7 113 55.8
Carub.0007s1055 Capsella rubella HOM05D006945 ORTHO05D005549 2.6e-32 142.1 115 53.9
Sp5g15500 Schrenkiella parvula HOM05D006945 ORTHO05D005549 7.4e-32 140.6 115 54.8
Sp7g27870 Schrenkiella parvula HOM05D006945 ORTHO05D005549 7.4e-32 140.6 110 57.3
AL7G52460 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 9.7e-32 140.2 111 53.2
A07p12270 Brassica napus HOM05D006945 ORTHO05D005549 2.2e-31 139.0 113 53.1
A07p12290 Brassica napus HOM05D006945 ORTHO05D005549 2.2e-31 139.0 113 53.1
BraA07t29011Z Brassica rapa HOM05D006945 ORTHO05D005549 2.2e-31 139.0 113 53.1
Sp7g27850 Schrenkiella parvula HOM05D006945 ORTHO05D005549 9.1e-30 133.7 103 56.3
AT5G38330 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 2.2e-28 129.0 110 52.7
BcaC02g10382 Brassica carinata HOM05D006945 ORTHO05D005549 3.8e-28 128.3 114 48.2
C04p29510 Brassica napus HOM05D006945 ORTHO05D005549 6.5e-28 127.5 110 50.0
BcaC02g10365 Brassica carinata HOM05D006945 ORTHO05D005549 8.5e-28 127.1 110 50.0
BcaC02g10381 Brassica carinata HOM05D006945 ORTHO05D005549 1.9e-27 125.9 106 51.9
A08p19430 Brassica napus HOM05D006945 ORTHO05D005549 7.2e-27 124.0 113 46.0
BraA08t33905Z Brassica rapa HOM05D006945 ORTHO05D005549 7.2e-27 124.0 113 46.0
A03p65360 Brassica napus HOM05D006945 ORTHO05D005549 9.4e-27 123.6 88 62.5
BcaNung00515 Brassica carinata HOM05D006945 ORTHO05D005549 2.1e-26 122.5 114 49.1
Sp7g27890 Schrenkiella parvula HOM05D006945 ORTHO05D005549 2.1e-26 122.5 108 48.1
A03p59250 Brassica napus HOM05D006945 ORTHO05D005549 2.7e-26 122.1 112 49.1
A03p59430 Brassica napus HOM05D006945 ORTHO05D005549 2.7e-26 122.1 112 49.1
BraA03t14982Z Brassica rapa HOM05D006945 ORTHO05D005549 2.7e-26 122.1 112 49.1
C07p57450 Brassica napus HOM05D006945 ORTHO05D005549 3.6e-26 121.7 112 49.1
BolC7t46213H Brassica oleracea HOM05D006945 ORTHO05D005549 3.6e-26 121.7 112 49.1
BraA03t14999Z Brassica rapa HOM05D006945 ORTHO05D005549 3.6e-26 121.7 112 49.1
Carub.0005s0829 Capsella rubella HOM05D006945 ORTHO05D005549 3.6e-26 121.7 110 45.5
Thhalv10000699m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 4.7e-26 121.3 110 50.0
BraA03t15590Z Brassica rapa HOM05D006945 ORTHO05D005549 1.4e-25 119.8 86 61.6
AT4G30074 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 1.8e-25 119.4 111 45.0
BcaB03g12631 Brassica carinata HOM05D006945 ORTHO05D005549 1.8e-25 119.4 116 44.8
Sp7g27900 Schrenkiella parvula HOM05D006945 ORTHO05D005549 3.9e-25 118.2 113 46.9
C07p58660 Brassica napus HOM05D006945 ORTHO05D005549 5.2e-25 117.9 112 48.2
BolC4t24502H Brassica oleracea HOM05D006945 ORTHO05D005549 5.2e-25 117.9 110 47.3
BolC7t46316H Brassica oleracea HOM05D006945 ORTHO05D005549 5.2e-25 117.9 112 48.2
C06p15940 Brassica napus HOM05D006945 ORTHO05D005549 6.7e-25 117.5 112 48.2
BolC6t36786H Brassica oleracea HOM05D006945 ORTHO05D005549 6.7e-25 117.5 112 48.2
AL7G22130 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 5.7e-24 114.4 111 43.2
A03p60770 Brassica napus HOM05D006945 ORTHO05D005549 7.4e-24 114.0 112 46.4
Thhalv10027387m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 1.3e-23 113.2 112 42.9
Thhalv10026848m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 4.8e-23 111.3 109 45.9
AL8G19370 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 6.3e-23 110.9 110 45.5
Carub.0008s0696 Capsella rubella HOM05D006945 ORTHO05D005549 2.4e-22 109.0 111 44.1
BcaB03g12630 Brassica carinata HOM05D006945 ORTHO05D005549 3.1e-22 108.6 104 44.2
AT5G38317 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 1.6e-21 106.3 109 44.0
Carub.0004s0306 Capsella rubella HOM05D006945 ORTHO05D005549 4.5e-21 104.8 111 44.1
A08p19440 Brassica napus HOM05D006945 ORTHO05D005549 1.3e-20 103.2 108 41.7
BraA08t33906Z Brassica rapa HOM05D006945 ORTHO05D005549 1.3e-20 103.2 108 41.7
Glyma.15G164400 Glycine max HOM05D006945 ORTHO05D005549 2.9e-20 102.1 111 43.2
Carub.0007s1053 Capsella rubella HOM05D006945 ORTHO05D005549 6.5e-20 100.9 111 43.2
C03p88930 Brassica napus HOM05D006945 ORTHO05D005549 1.1e-19 100.1 108 40.7
PGR044G0988 Punica granatum HOM05D006945 ORTHO05D005549 1.1e-19 100.1 103 44.7
Eucgr.C02226 Eucalyptus grandis HOM05D006945 ORTHO05D005549 3.2e-19 98.6 104 42.3
AT5G42242 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 4.2e-19 98.2 109 42.2
Sp7g27880 Schrenkiella parvula HOM05D006945 ORTHO05D005549 9.4e-19 97.1 104 47.1
Eucgr.C02232 Eucalyptus grandis HOM05D006945 ORTHO05D005549 1.2e-18 96.7 104 42.3
MELO3C003988.2 Cucumis melo HOM05D006945 ORTHO05D005549 1.6e-18 96.3 108 41.7
Rhsim13G0155500 Rhododendron simsii HOM05D006945 ORTHO05D005549 2.7e-18 95.5 104 40.4
Cpa.g.sc95.22 Carica papaya HOM05D006945 ORTHO05D005549 8.0e-18 94.0 108 42.6
Thhalv10026783m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 8.0e-18 94.0 110 39.1
Carub.0007s3775 Capsella rubella HOM05D006945 ORTHO05D005549 2.3e-17 92.4 110 41.8
CARHR214260 Cardamine hirsuta HOM05D006945 ORTHO05D005549 3.0e-17 92.0 80 52.5
CARHR237980 Cardamine hirsuta HOM05D006945 ORTHO05D005549 1.5e-16 89.7 98 40.8
BolC3t21204H Brassica oleracea HOM05D006945 ORTHO05D005549 3.3e-16 88.6 110 39.1
A03p59410 Brassica napus HOM05D006945 ORTHO05D005549 4.4e-16 88.2 110 40.9
Eucgr.C02228 Eucalyptus grandis HOM05D006945 ORTHO05D005549 5.7e-16 87.8 104 40.4
Eucgr.C02229 Eucalyptus grandis HOM05D006945 ORTHO05D005549 5.7e-16 87.8 103 41.7
Eucgr.C02231 Eucalyptus grandis HOM05D006945 ORTHO05D005549 5.7e-16 87.8 104 40.4
FAN17G1318 Fragaria x ananassa HOM05D006945 ORTHO05D005549 7.5e-16 87.4 107 40.2
FvH4_4g06580 Fragaria vesca HOM05D006945 ORTHO05D005549 9.7e-16 87.0 107 40.2
BraA03t14997Z Brassica rapa HOM05D006945 ORTHO05D005549 1.7e-15 86.3 110 40.0
C07p57430 Brassica napus HOM05D006945 ORTHO05D005549 2.2e-15 85.9 110 40.9
Gohir.D08G029125 Gossypium hirsutum HOM05D009688 ORTHO05D005549 4.5e-13 78.2 111 40.5
Gorai.004G026300 Gossypium raimondii HOM05D009688 ORTHO05D005549 2.2e-12 75.9 100 42.0
CARHR237960 Cardamine hirsuta HOM05D006945 ORTHO05D005549 5.5e-11 71.2 48 56.2
Rhsim13G0155400 Rhododendron simsii HOM05D006945 ORTHO05D005549 9.4e-11 70.5 101 36.6
TPR.G30224 Trifolium pratense HOM05D006945 ORTHO05D005549 2.1e-10 69.3 109 32.1
AL7G22170 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 1.4e-09 66.6 48 52.1
BcaNung02067 Brassica carinata HOM05D006945 ORTHO05D005549 9.8e-08 60.5 33 69.7


User provided reference genes

Program Settings