Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung00507 Brassica carinata HOM05D005423 ORTHO05D006223 2.4e-79 298.9 166 100.0
A03p59360 Brassica napus HOM05D005423 ORTHO05D006223 5.6e-68 261.2 166 89.8
C07p57390 Brassica napus HOM05D005423 ORTHO05D006223 5.6e-68 261.2 165 81.8
BolC7t46208H Brassica oleracea HOM05D005423 ORTHO05D006223 5.6e-68 261.2 165 81.8
BraA03t14993Z Brassica rapa HOM05D005423 ORTHO05D006223 5.6e-68 261.2 166 89.8
Sp7g27780 Schrenkiella parvula HOM05D005423 ORTHO05D006223 1.6e-62 243.0 170 81.2
Thhalv10026388m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 2.1e-59 232.6 175 76.6
AL7G22260 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 7.1e-55 217.6 172 70.3
AT4G29980 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 7.1e-55 217.6 171 69.6
CARHR237890 Cardamine hirsuta HOM05D005423 ORTHO05D006223 3.5e-54 215.3 140 80.0
Carub.0007s1066 Capsella rubella HOM05D005423 ORTHO05D006223 7.8e-54 214.2 165 69.7
BraA08t33095Z Brassica rapa HOM05D005423 ORTHO05D006223 9.3e-31 137.5 149 52.3
BcaC07g37806 Brassica carinata HOM05D005423 ORTHO05D006223 1.6e-30 136.7 149 52.3
BolC8t48195H Brassica oleracea HOM05D005423 ORTHO05D006223 1.6e-30 136.7 149 52.3
A08p11040 Brassica napus HOM05D005423 ORTHO05D006223 2.1e-30 136.3 149 51.7
BcaB04g18206 Brassica carinata HOM05D005423 ORTHO05D006223 3.5e-30 135.6 149 52.3
Carub.0001s2910 Capsella rubella HOM05D005423 ORTHO05D006223 3.5e-30 135.6 156 51.9
AL1G44970 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 1.3e-29 133.7 150 52.0
Sp1g26680 Schrenkiella parvula HOM05D005423 ORTHO05D006223 6.7e-29 131.3 151 49.7
Aa31LG6G12020 Aethionema arabicum HOM05D005423 ORTHO05D006223 5.7e-28 128.3 173 45.1
Carub.0006s3088 Capsella rubella HOM05D005423 ORTHO05D006223 1.6e-27 126.7 156 47.4
Thhalv10009325m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 2.8e-27 125.9 153 47.7
CARHR030270 Cardamine hirsuta HOM05D005423 ORTHO05D006223 1.1e-26 124.0 145 48.3
AT1G30800 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 1.8e-26 123.2 152 48.0
AT4G12950 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 5.3e-26 121.7 129 49.6
THA.LOC104814335 Tarenaya hassleriana HOM05D005423 ORTHO05D006223 1.0e-24 117.5 148 48.0
BcaB01g00727 Brassica carinata HOM05D005423 ORTHO05D006223 1.3e-24 117.1 135 49.6
A03p59580 Brassica napus HOM05D005423 ORTHO05D006223 2.9e-24 115.9 134 47.8
C08p24310 Brassica napus HOM05D005423 ORTHO05D006223 5.0e-24 115.2 136 49.3
BolC8t50049H Brassica oleracea HOM05D005423 ORTHO05D006223 5.0e-24 115.2 136 49.3
Sp7g28070 Schrenkiella parvula HOM05D005423 ORTHO05D006223 5.0e-24 115.2 132 48.5
A06p18470 Brassica napus HOM05D005423 ORTHO05D006223 1.1e-23 114.0 135 48.9
BcaC07g39399 Brassica carinata HOM05D005423 ORTHO05D006223 7.1e-23 111.3 135 48.1
BraA03t15014Z Brassica rapa HOM05D005423 ORTHO05D006223 1.6e-22 110.2 133 45.9
Thhalv10027436m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 6.1e-22 108.2 129 42.6
Sc21g0002200 Simmondsia chinensis HOM05D005423 ORTHO05D006223 3.3e-20 102.4 149 39.6
Glyma.15G191500 Glycine max HOM05D005423 ORTHO05D006223 9.7e-20 100.9 127 40.9
Sc21g0002210 Simmondsia chinensis HOM05D005423 ORTHO05D006223 9.7e-20 100.9 149 39.6
Sc04g0008360 Simmondsia chinensis HOM05D005423 ORTHO05D006223 1.1e-18 97.4 132 41.7
Duzib160G0446 Durio zibethinus HOM05D005423 ORTHO05D006223 2.4e-18 96.3 140 41.4
Thecc.06G005400 Theobroma cacao HOM05D005423 ORTHO05D006223 5.3e-18 95.1 140 38.6
CANSAT35G1706 Cannabis sativa HOM05D005423 ORTHO05D006223 6.9e-18 94.7 134 37.3
Prupe.4G102300 Prunus persica HOM05D005423 ORTHO05D006223 6.9e-18 94.7 129 38.0
Atru.chr10.659 Acer truncatum HOM05D005423 ORTHO05D006223 1.2e-17 94.0 137 42.3
TWI38G0231 Tripterygium wilfordii HOM05D005423 ORTHO05D006223 1.2e-17 94.0 129 41.1
Hma1.2p1_0410F.1_g147050 Hydrangea macrophylla HOM05D005423 ORTHO05D006223 1.5e-17 93.6 129 40.3
TAR636G0950 Trochodendron aralioides HOM05D005423 ORTHO05D006223 2.0e-17 93.2 146 38.4
MD00G1097400 Malus domestica HOM05D005423 ORTHO05D006223 2.6e-17 92.8 129 37.2
Rhsim13G0126500 Rhododendron simsii HOM05D005423 ORTHO05D006223 3.4e-17 92.4 147 32.7
Haze_05969 Corylus avellana HOM05D005423 ORTHO05D006223 4.5e-17 92.0 101 42.6
Cfa000754 Carpinus fangiana HOM05D005423 ORTHO05D006223 5.9e-17 91.7 131 35.9
Lj1P1155T48 Lonicera japonica HOM05D005423 ORTHO05D006223 7.7e-17 91.3 147 36.7
FvH4_3g11440 Fragaria vesca HOM05D005423 ORTHO05D006223 1.0e-16 90.9 129 35.7
AL7G23570 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 1.3e-16 90.5 129 41.9
Aqoxy2G01436 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 2.9e-16 89.4 131 36.6
FAN16G1003 Fragaria x ananassa HOM05D005423 ORTHO05D006223 2.9e-16 89.4 129 34.9
Gohir.D02G104700 Gossypium hirsutum HOM05D005423 ORTHO05D006223 2.9e-16 89.4 147 34.0
Gorai.005G118900 Gossypium raimondii HOM05D005423 ORTHO05D006223 2.9e-16 89.4 147 34.0
Gohir.A02G088801 Gossypium hirsutum HOM05D005423 ORTHO05D006223 3.8e-16 89.0 147 34.0
Carub.0007s1174 Capsella rubella HOM05D005423 ORTHO05D006223 8.5e-16 87.8 120 42.5
Lsat_1_v5_gn_1_91741 Lactuca sativa HOM05D005423 ORTHO05D006223 1.4e-15 87.0 152 31.6
TPR.G22906 Trifolium pratense HOM05D005423 ORTHO05D006223 1.4e-15 87.0 130 36.2
BcaC07g40588 Brassica carinata HOM05D005423 ORTHO05D006223 3.2e-15 85.9 65 66.2
Manes.03G066900 Manihot esculenta HOM05D005423 ORTHO05D006223 3.2e-15 85.9 132 39.4
Nitab4.5_0004015g0040 Nicotiana tabacum HOM05D005423 ORTHO05D006223 4.2e-15 85.5 147 32.0
Potri.001G440800 Populus trichocarpa HOM05D005423 ORTHO05D006223 4.2e-15 85.5 133 37.6
Ciclev10017493m.g Citrus clementina HOM05D005423 ORTHO05D006223 5.5e-15 85.1 128 39.8
Psat1g018720 Pisum sativum HOM05D005423 ORTHO05D006223 5.5e-15 85.1 131 38.9
AUR62028668 Chenopodium quinoa HOM05D005423 ORTHO05D006223 7.2e-15 84.7 137 32.8
BcaC09g50401 Brassica carinata HOM05D005423 ORTHO05D006223 9.4e-15 84.3 65 63.1
AUR62008091 Chenopodium quinoa HOM05D005423 ORTHO05D006223 9.4e-15 84.3 137 33.6
Nitab4.5_0006659g0010 Nicotiana tabacum HOM05D005423 ORTHO05D006223 9.4e-15 84.3 147 31.3
C07p57610 Brassica napus HOM05D005423 ORTHO05D006223 1.2e-14 84.0 133 39.1
AUR62008092 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.6e-14 83.6 137 34.3
Ca_02385_v3 Cicer arietinum L. HOM05D005423 ORTHO05D006223 1.6e-14 83.6 134 35.8
Solyc11g072680.1 Solanum lycopersicum HOM05D005423 ORTHO05D006223 2.1e-14 83.2 138 37.0
AL7G23530 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 2.7e-14 82.8 92 51.1
AUR62028667 Chenopodium quinoa HOM05D005423 ORTHO05D006223 2.7e-14 82.8 137 32.8
Ah.02g124440 Amaranthus hybridus HOM05D005423 ORTHO05D006223 3.6e-14 82.4 149 30.2
Sopen11g030350 Solanum pennellii HOM05D005423 ORTHO05D006223 3.6e-14 82.4 138 37.0
HanXRQChr01g0020631 Helianthus annuus HOM05D005423 ORTHO05D006223 4.6e-14 82.0 144 29.9
EL10Ac5g10610 Beta vulgaris HOM05D005423 ORTHO05D006223 6.1e-14 81.6 142 29.6
Medtr2g047120 Medicago truncatula HOM05D005423 ORTHO05D006223 7.9e-14 81.3 130 35.4
QL05p063092 Quercus lobata HOM05D005423 ORTHO05D006223 7.9e-14 81.3 140 32.9
PGSC0003DMG400025363 Solanum tuberosum HOM05D005423 ORTHO05D006223 7.9e-14 81.3 138 34.8
CAN.G84.20 Capsicum annuum HOM05D005423 ORTHO05D006223 1.4e-13 80.5 141 31.9
BolC7t46226H Brassica oleracea HOM05D005423 ORTHO05D006223 2.3e-13 79.7 133 37.6
COL.COLO4_26869 Corchorus olitorius HOM05D005423 ORTHO05D006223 2.3e-13 79.7 131 38.2
FAN21G0600 Fragaria x ananassa HOM05D005423 ORTHO05D006223 2.3e-13 79.7 88 40.9
AUR62008089 Chenopodium quinoa HOM05D005423 ORTHO05D006223 3.0e-13 79.3 137 32.1
FAN25G0767 Fragaria x ananassa HOM05D005423 ORTHO05D006223 3.9e-13 79.0 88 39.8
Lj6g0018842 Lotus japonicus HOM05D005423 ORTHO05D006223 3.9e-13 79.0 129 35.7
PSO782G2497 Papaver somniferum HOM05D005423 ORTHO05D006223 3.9e-13 79.0 140 34.3
Migut.M01932 Erythranthe guttata HOM05D005423 ORTHO05D006223 5.1e-13 78.6 145 33.1
MBI19_g30013_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 6.7e-13 78.2 132 34.8
EL10Ac5g10674 Beta vulgaris HOM05D005423 ORTHO05D006223 8.8e-13 77.8 142 28.9
CiPaw.09G149100 Carya illinoinensis HOM05D005423 ORTHO05D006223 8.8e-13 77.8 130 32.3
Oeu000496.1 Olea europaea HOM05D005423 ORTHO05D006223 2.5e-12 76.3 82 42.7
Sabra16G0298100 Salix brachista HOM05D005423 ORTHO05D006223 3.3e-12 75.9 100 39.0
Sabra16G0300100 Salix brachista HOM05D005423 ORTHO05D006223 3.3e-12 75.9 100 39.0
CDE04G2898 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 4.3e-12 75.5 134 32.8
CARHR238100 Cardamine hirsuta HOM05D005423 ORTHO05D006223 9.7e-12 74.3 77 49.4
CDE04G0856 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 9.7e-12 74.3 136 33.8
EL10Ac5g10640 Beta vulgaris HOM05D005423 ORTHO05D006223 1.3e-11 73.9 143 30.1
SGA_v2.0_scaffold1G00298 Striga asiatica HOM05D005423 ORTHO05D006223 1.3e-11 73.9 139 31.7
Lalb_Chr11g0073251 Lupinus albus HOM05D005423 ORTHO05D006223 2.2e-11 73.2 103 36.9
PSO210G3101 Papaver somniferum HOM05D005423 ORTHO05D006223 2.8e-11 72.8 152 31.6
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 8.2e-11 71.2 134 32.8
A09p38220 Brassica napus HOM05D005423 ORTHO05D006223 1.5e-09 67.0 53 64.2
Oeu063151.1 Olea europaea HOM05D005423 ORTHO05D006223 1.5e-09 67.0 80 40.0
C09p04090 Brassica napus HOM05D005423 ORTHO05D006223 3.8e-08 62.4 50 60.0
MBI19_g33491_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 1.9e-07 60.1 121 32.2
Phvul.009G218400 Phaseolus vulgaris HOM05D005423 ORTHO05D006223 9.4e-07 57.8 94 36.2
Thhalv10027213m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 1.6e-06 57.0 44 68.2
CSS0002540 Camellia sinensis var. sinensis HOM05D007205 ORTHO05D009175 2.1e-06 56.6 123 31.7
Nn8g39654 Nelumbo nucifera HOM05D005423 ORTHO05D006223 7.9e-06 54.7 87 34.5


User provided reference genes

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