Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 2.4e-75 285.4 142 100.0
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 1.5e-61 239.6 145 88.3
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 6.1e-55 217.6 147 81.6
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 1.7e-49 199.5 145 77.2
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 3.0e-46 188.7 147 73.5
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 3.0e-46 188.7 147 73.5
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 2.8e-44 182.2 136 75.0
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 8.8e-38 160.6 152 64.5
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 2.8e-36 155.6 138 64.5
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 4.8e-36 154.8 138 64.5
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 4.8e-36 154.8 138 64.5
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 2.2e-33 146.0 134 59.0
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 2.2e-33 146.0 134 59.0
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 5.7e-29 131.3 131 58.8
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 1.7e-28 129.8 138 59.4
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 1.7e-25 119.8 148 52.0
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 1.5e-24 116.7 139 52.5
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 1.8e-22 109.8 146 49.3
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 1.6e-18 96.7 126 46.8
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 1.1e-16 90.5 109 51.4
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 3.3e-16 89.0 66 65.2
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 4.2e-16 88.6 142 36.6
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 2.8e-15 85.9 87 55.2
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 2.8e-15 85.9 54 66.7
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 3.6e-15 85.5 72 55.6
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 3.6e-15 85.5 72 55.6
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 4.7e-15 85.1 101 43.6
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 4.7e-15 85.1 49 69.4
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 8.0e-15 84.3 68 61.8
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 1.8e-14 83.2 81 56.8
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 2.3e-14 82.8 74 60.8
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 3.0e-14 82.4 64 65.6
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 3.0e-14 82.4 90 53.3
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 3.0e-14 82.4 78 57.7
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 4.0e-14 82.0 36 86.1
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 4.0e-14 82.0 38 84.2
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 5.2e-14 81.6 48 72.9
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 6.8e-14 81.3 76 59.2
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 8.9e-14 80.9 101 42.6
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 8.9e-14 80.9 75 56.0
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 8.9e-14 80.9 89 44.9
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 8.9e-14 80.9 89 44.9
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 1.2e-13 80.5 79 51.9
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 1.5e-13 80.1 44 75.0
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 1.5e-13 80.1 80 50.0
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 2.0e-13 79.7 104 46.2
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 2.6e-13 79.3 80 50.0
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 2.6e-13 79.3 65 60.0
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 2.6e-13 79.3 52 63.5
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 3.4e-13 79.0 82 50.0
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 3.4e-13 79.0 83 48.2
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 4.4e-13 78.6 37 83.8
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 4.4e-13 78.6 107 39.3
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 4.4e-13 78.6 150 36.0
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 5.7e-13 78.2 69 53.6
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 5.7e-13 78.2 80 55.0
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 5.7e-13 78.2 56 60.7
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 7.5e-13 77.8 62 61.3
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 7.5e-13 77.8 36 86.1
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 9.8e-13 77.4 36 83.3
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 9.8e-13 77.4 52 61.5
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 1.3e-12 77.0 110 41.8
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 1.7e-12 76.6 85 45.9
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 2.2e-12 76.3 121 38.8
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 2.8e-12 75.9 44 68.2
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 3.7e-12 75.5 32 90.6
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 4.9e-12 75.1 36 80.6
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 1.1e-11 73.9 74 52.7
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.4e-11 73.6 106 46.2
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 1.4e-11 73.6 55 61.8
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 1.4e-11 73.6 55 61.8
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 1.4e-11 73.6 55 61.8
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.8e-11 73.2 106 46.2
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 1.8e-11 73.2 106 46.2
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 4.1e-11 72.0 115 44.3
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 5.4e-11 71.6 136 36.8
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 5.4e-11 71.6 129 38.8
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 5.4e-11 71.6 77 54.5
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 9.2e-11 70.9 138 37.0
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 9.2e-11 70.9 76 50.0
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 1.2e-10 70.5 31 87.1
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 1.2e-10 70.5 142 34.5
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 1.6e-10 70.1 100 37.0
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 1.6e-10 70.1 66 50.0
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 3.5e-10 68.9 32 81.2
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 3.5e-10 68.9 121 40.5
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 4.5e-10 68.6 32 81.2
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 4.5e-10 68.6 31 83.9
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 1.0e-09 67.4 34 76.5
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 1.0e-09 67.4 33 75.8
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 1.3e-09 67.0 116 40.5
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 2.9e-09 65.9 61 55.7
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 3.8e-09 65.5 89 38.2
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 5.0e-09 65.1 76 46.1
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 5.0e-09 65.1 116 37.1
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 8.6e-09 64.3 68 47.1
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 8.6e-09 64.3 70 50.0
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 1.5e-08 63.5 74 41.9
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 1.9e-08 63.2 30 73.3
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 5.6e-08 61.6 117 32.5
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 2.8e-07 59.3 65 50.8
Dinv40044 Davidia involucrata HOM05D007510 ORTHO05D009587 4.7e-07 58.5 57 56.1
AL6G28340 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 6.1e-07 58.2 33 69.7
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 1.0e-06 57.4 71 43.7
Pp3c10_3490 Physcomitrium patens HOM05D007510 ORTHO05D009587 1.4e-06 57.0 62 46.8


User provided reference genes

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