Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 2.9e-70 268.5 138 100.0
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 2.1e-68 262.3 138 97.8
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 2.1e-68 262.3 138 97.8
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 7.9e-68 260.4 138 97.1
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 7.9e-68 260.4 138 97.1
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 1.7e-65 252.7 136 94.1
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 6.3e-65 250.8 138 92.8
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 2.0e-63 245.7 146 90.4
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 5.9e-63 244.2 142 90.1
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 1.3e-62 243.0 130 95.4
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 8.5e-62 240.4 146 88.4
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 8.5e-62 240.4 134 93.3
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 1.1e-61 240.0 134 89.6
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 1.1e-61 240.0 139 88.5
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 4.2e-61 238.0 146 87.0
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 4.2e-61 238.0 146 87.0
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 3.7e-49 198.4 138 71.0
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 6.3e-49 197.6 130 73.8
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 1.8e-48 196.1 135 71.1
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 4.1e-48 194.9 130 74.6
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 4.1e-48 194.9 130 74.6
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 5.3e-48 194.5 129 76.0
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 9.1e-48 193.7 132 73.5
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 9.1e-48 193.7 133 72.9
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 1.2e-47 193.4 129 75.2
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 1.2e-47 193.4 143 71.3
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 3.5e-47 191.8 129 74.4
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 4.5e-47 191.4 132 73.5
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 3.8e-46 188.3 138 69.6
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 3.8e-46 188.3 138 69.6
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 6.5e-46 187.6 135 71.1
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 8.5e-46 187.2 130 69.2
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 8.5e-46 187.2 136 70.6
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 1.1e-45 186.8 136 69.1
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 1.1e-45 186.8 132 68.2
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 1.1e-45 186.8 129 75.2
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 1.1e-45 186.8 135 68.9
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 1.5e-45 186.4 135 68.9
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 1.5e-45 186.4 139 66.2
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 1.9e-45 186.0 135 69.6
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 1.9e-45 186.0 131 70.2
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 2.5e-45 185.7 137 68.6
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 3.2e-45 185.3 117 76.1
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 3.2e-45 185.3 135 68.9
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 3.2e-45 185.3 131 69.5
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 3.2e-45 185.3 132 71.2
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 4.2e-45 184.9 129 69.8
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 7.2e-45 184.1 139 66.2
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 7.2e-45 184.1 138 66.7
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 7.2e-45 184.1 132 71.2
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 1.2e-44 183.3 138 69.6
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 1.6e-44 183.0 135 70.4
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 2.1e-44 182.6 130 70.0
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 2.7e-44 182.2 138 68.8
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 2.7e-44 182.2 138 68.1
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 2.7e-44 182.2 140 67.1
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 2.7e-44 182.2 132 71.2
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 3.6e-44 181.8 125 71.2
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 3.6e-44 181.8 119 73.9
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 4.7e-44 181.4 131 70.2
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 4.7e-44 181.4 136 69.1
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 8.0e-44 180.6 119 72.3
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 8.0e-44 180.6 150 61.3
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 1.4e-43 179.9 138 65.2
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 1.8e-43 179.5 140 67.9
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 5.2e-43 177.9 130 67.7
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 8.8e-43 177.2 136 66.2
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 1.5e-42 176.4 134 68.7
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.5e-42 176.4 144 66.0
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 2.0e-42 176.0 138 65.9
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 3.4e-42 175.3 109 74.3
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 5.7e-42 174.5 132 69.7
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 5.7e-42 174.5 134 67.9
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 7.5e-42 174.1 117 74.4
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 7.5e-42 174.1 132 69.7
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 7.5e-42 174.1 132 69.7
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 7.5e-42 174.1 132 69.7
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 7.5e-42 174.1 132 69.7
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 9.8e-42 173.7 131 69.5
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 1.7e-41 172.9 134 66.4
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 2.2e-41 172.6 134 68.7
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 3.7e-41 171.8 109 76.1
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 1.1e-40 170.2 134 67.2
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 1.1e-40 170.2 138 63.8
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 1.4e-40 169.9 132 63.6
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 1.4e-40 169.9 138 63.0
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 2.4e-40 169.1 127 68.5
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.1e-40 168.7 106 78.3
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 3.1e-40 168.7 126 63.5
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 7.0e-40 167.5 148 61.5
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 1.2e-39 166.8 111 72.1
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 3.5e-39 165.2 119 69.7
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 5.9e-39 164.5 125 68.0
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 7.7e-39 164.1 138 62.3
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 1.7e-38 162.9 141 61.7
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 1.7e-38 162.9 122 63.9
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 1.7e-38 162.9 122 63.9
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 2.9e-38 162.2 129 65.1
CDE07G0026 Ceratophyllum demersum HOM05D006312 ORTHO05D007843 8.5e-38 160.6 135 65.9
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 4.2e-37 158.3 138 61.6
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 2.7e-36 155.6 130 59.2
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 3.0e-35 152.1 113 69.9
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 4.0e-35 151.8 132 61.4
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 5.2e-35 151.4 129 60.5
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 5.2e-35 151.4 118 68.6
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 7.5e-34 147.5 94 76.6
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 4.9e-33 144.8 86 79.1
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 8.3e-33 144.1 106 67.9
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 1.4e-32 143.3 115 64.3
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 7.0e-32 141.0 109 59.6
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 2.7e-31 139.0 114 62.3
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 1.0e-30 137.1 97 70.1
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 1.9e-29 132.9 111 58.6
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 1.9e-29 132.9 126 54.0
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 5.5e-29 131.3 123 51.2
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.2e-28 130.2 116 62.9
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 4.4e-26 121.7 116 50.0
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 4.1e-24 115.2 123 45.5
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 7.8e-23 110.9 77 70.1
MCO03G312 Micromonas commoda HOM05D006312 ORTHO05D007843 7.0e-16 87.8 98 45.9
Cre16.g679300 Chlamydomonas reinhardtii HOM05D006312 ORTHO05D007843 9.2e-16 87.4 122 40.2
CSS0018042 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 6.2e-12 74.7 74 50.0
CSS0013138 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 5.4e-08 61.6 61 50.8
PRCOL_00002065 Prasinoderma coloniale HOM05D006312 ORTHO05D007843 3.5e-07 58.9 81 45.7


User provided reference genes

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