Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung00358 Brassica carinata HOM05D000053 ORTHO05D032112 1.6e-33 146.4 130 100.0
A01p23140 Brassica napus HOM05D000053 ORTHO05D000035 9.0e-13 77.4 113 84.1
BcaNung00360 Brassica carinata HOM05D000053 ORTHO05D000035 3.4e-12 75.5 112 84.8
BraA01t02224Z Brassica rapa HOM05D000053 ORTHO05D000035 3.4e-12 75.5 113 84.1
C01p28750 Brassica napus HOM05D000053 ORTHO05D000035 9.9e-12 73.9 113 84.1
Thhalv10024155m.g Eutrema salsugineum HOM05D000053 ORTHO05D000035 4.9e-11 71.6 111 79.3
BraA04t16515Z Brassica rapa HOM05D000053 ORTHO05D000035 1.4e-10 70.1 113 80.5
BcaB01g00056 Brassica carinata HOM05D000053 ORTHO05D000035 3.2e-10 68.9 114 80.7
A04p08300 Brassica napus HOM05D000053 ORTHO05D000035 3.2e-10 68.9 113 79.6
A01p23080 Brassica napus HOM05D000053 ORTHO05D000035 5.4e-10 68.2 113 80.5
A04p08310 Brassica napus HOM05D000053 ORTHO05D000035 5.4e-10 68.2 113 79.6
C04p41960 Brassica napus HOM05D000053 ORTHO05D032112 7.1e-10 67.8 39 74.4
BraA04t16514Z Brassica rapa HOM05D000053 ORTHO05D000035 1.2e-09 67.0 113 79.6
BraA01t02221Z Brassica rapa HOM05D000053 ORTHO05D000035 1.6e-09 66.6 108 84.3
BcaC02g09386 Brassica carinata HOM05D000053 ORTHO05D000035 2.1e-09 66.2 113 79.6
A08p06550 Brassica napus HOM05D000053 ORTHO05D000035 2.1e-09 66.2 106 84.9
BraA08t32670Z Brassica rapa HOM05D000053 ORTHO05D000035 2.1e-09 66.2 106 84.9
C04p42050 Brassica napus HOM05D000053 ORTHO05D000035 2.7e-09 65.9 112 80.4
C08p31190 Brassica napus HOM05D000053 ORTHO05D000035 2.7e-09 65.9 115 79.1
BolC4t25784H Brassica oleracea HOM05D000053 ORTHO05D032112 2.7e-09 65.9 39 71.8
BolC4t25790H Brassica oleracea HOM05D000053 ORTHO05D000035 2.7e-09 65.9 112 80.4
BcaB02g08649 Brassica carinata HOM05D000053 ORTHO05D000035 3.5e-09 65.5 38 76.3
Thhalv10026954m.g Eutrema salsugineum HOM05D000053 ORTHO05D000035 3.5e-09 65.5 34 85.3
AT4G13920 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 4.6e-09 65.1 108 82.4
C01p28700 Brassica napus HOM05D000053 ORTHO05D000035 1.0e-08 63.9 106 84.9
BolC1t02796H Brassica oleracea HOM05D000053 ORTHO05D000035 1.0e-08 63.9 106 84.9
Carub.0007s2863 Capsella rubella HOM05D000053 ORTHO05D000035 1.0e-08 63.9 113 77.9
C01p28720 Brassica napus HOM05D000053 ORTHO05D000035 1.3e-08 63.5 39 71.8
BolC1t02799H Brassica oleracea HOM05D000053 ORTHO05D000035 1.3e-08 63.5 39 71.8
Sp7g11610 Schrenkiella parvula HOM05D000053 ORTHO05D000035 1.3e-08 63.5 109 82.6
Thhalv10024378m.g Eutrema salsugineum HOM05D000053 ORTHO05D000035 1.7e-08 63.2 34 85.3
BcaC07g39907 Brassica carinata HOM05D000053 ORTHO05D000035 2.3e-08 62.8 108 81.5
A09p48840 Brassica napus HOM05D000053 ORTHO05D000035 2.3e-08 62.8 108 81.5
BolC8t50741H Brassica oleracea HOM05D000053 ORTHO05D000035 2.3e-08 62.8 108 81.5
BraA09t40339Z Brassica rapa HOM05D000053 ORTHO05D000035 2.3e-08 62.8 108 81.5
AL7G42710 Arabidopsis lyrata HOM05D000053 ORTHO05D000035 5.1e-08 61.6 113 78.8
C08p07590 Brassica napus HOM05D000053 ORTHO05D000035 6.6e-08 61.2 106 83.0
BolC8t47606H Brassica oleracea HOM05D000053 ORTHO05D000035 6.6e-08 61.2 106 83.0
BcaB01g00878 Brassica carinata HOM05D000053 ORTHO05D000035 1.1e-07 60.5 33 81.8
BcaB04g20561 Brassica carinata HOM05D000053 ORTHO05D000035 1.1e-07 60.5 113 78.8
Carub.0007s2855 Capsella rubella HOM05D000053 ORTHO05D000035 1.1e-07 60.5 108 83.3
A01p23090 Brassica napus HOM05D000053 ORTHO05D000035 1.5e-07 60.1 40 70.0
AL7G42590 Arabidopsis lyrata HOM05D000053 ORTHO05D000035 1.9e-07 59.7 107 80.4
A04p08350 Brassica napus HOM05D000053 ORTHO05D000035 3.3e-07 58.9 106 81.1
Sp7g11600 Schrenkiella parvula HOM05D000053 ORTHO05D000035 5.6e-07 58.2 109 78.9
Sp7g11700 Schrenkiella parvula HOM05D000053 ORTHO05D000035 5.6e-07 58.2 106 83.0
A04p08370 Brassica napus HOM05D000053 ORTHO05D000035 7.3e-07 57.8 112 75.9
Carub.0007s2864 Capsella rubella HOM05D000053 ORTHO05D000035 7.3e-07 57.8 104 81.7
Thhalv10027576m.g Eutrema salsugineum HOM05D000053 ORTHO05D000035 7.3e-07 57.8 104 82.7
BraA04t16523Z Brassica rapa HOM05D000053 ORTHO05D000035 9.6e-07 57.4 112 75.9
BcaC02g09387 Brassica carinata HOM05D000053 ORTHO05D000035 1.3e-06 57.0 112 75.9
BolC4t25791H Brassica oleracea HOM05D000053 ORTHO05D000035 1.3e-06 57.0 112 75.9
C04p42070 Brassica napus HOM05D000053 ORTHO05D000035 1.6e-06 56.6 112 75.9
Carub.0007s2856 Capsella rubella HOM05D000053 ORTHO05D000035 1.6e-06 56.6 107 81.3
AT4G13810 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 3.6e-06 55.5 113 76.1
BolC4t23198H Brassica oleracea HOM05D000053 ORTHO05D000035 4.8e-06 55.1 103 80.6
CARHR219810 Cardamine hirsuta HOM05D000053 ORTHO05D000035 6.2e-06 54.7 113 75.2
Carub.0005s1023 Capsella rubella HOM05D000053 ORTHO05D000035 8.1e-06 54.3 113 77.0


User provided reference genes

Program Settings