Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung00355 Brassica carinata HOM05D008478 ORTHO05D013784 2.1e-222 775.4 405 100.0
BcaB01g03994 Brassica carinata HOM05D008478 ORTHO05D013784 1.4e-197 693.0 405 90.9
BcaB04g17537 Brassica carinata HOM05D008478 ORTHO05D016555 2.9e-179 632.1 350 93.4
BcaB06g27392 Brassica carinata HOM05D008478 ORTHO05D000740 2.7e-156 555.8 305 93.4
C03p84910 Brassica napus HOM05D008478 ORTHO05D013784 2.7e-148 529.3 398 75.4
BNapus_Darmor_BZH_scaffold_118p00230 Brassica napus HOM05D008478 ORTHO05D013784 3.0e-131 472.6 407 68.1
BcaB01g02635 Brassica carinata HOM05D008478 ORTHO05D013784 3.9e-131 472.2 258 94.6
BcaC01g00419 Brassica carinata HOM05D008478 ORTHO05D013784 3.3e-130 469.2 407 67.6
BraA04t17855Z Brassica rapa HOM05D008478 ORTHO05D013784 9.6e-130 467.6 407 67.8
BcaC08g44695 Brassica carinata HOM05D008478 ORTHO05D013784 9.9e-127 457.6 405 65.9
A03p05330 Brassica napus HOM05D008478 ORTHO05D013784 1.5e-119 433.7 407 63.1
BraA09t36306Z Brassica rapa HOM05D008478 ORTHO05D013784 1.7e-118 430.3 407 63.9
BcaC08g45635 Brassica carinata HOM05D008478 ORTHO05D013784 3.3e-114 416.0 405 62.7
BcaB06g28522 Brassica carinata HOM05D008478 ORTHO05D013784 1.4e-93 347.4 408 56.1
BolC3t20783H Brassica oleracea HOM05D008478 ORTHO05D013784 5.7e-82 308.9 258 69.8
C03p79550 Brassica napus HOM05D008478 ORTHO05D024370 1.3e-78 297.7 275 64.4
C04p60800 Brassica napus HOM05D008478 ORTHO05D024370 3.8e-78 296.2 262 66.0
BolC4t27570H Brassica oleracea HOM05D008478 ORTHO05D024370 3.8e-78 296.2 262 66.0
C06p33960 Brassica napus HOM05D008478 ORTHO05D042775 2.8e-65 253.4 219 68.0
BolC6t38508H Brassica oleracea HOM05D008478 ORTHO05D042775 2.8e-65 253.4 219 68.0
A01p06330 Brassica napus HOM05D008478 ORTHO05D027660 7.5e-58 228.8 192 69.3
BraA02t05251Z Brassica rapa HOM05D008478 ORTHO05D027660 7.5e-58 228.8 192 69.3
C06p22310 Brassica napus HOM05D008478 ORTHO05D097459 1.3e-57 228.0 154 77.9
BcaB06g28523 Brassica carinata HOM05D008478 ORTHO05D024370 1.8e-56 224.2 173 73.4
BraA04t15946Z Brassica rapa HOM05D008478 ORTHO05D024370 1.2e-52 211.5 161 73.9
A07p43230 Brassica napus HOM05D008478 ORTHO05D013784 2.9e-49 200.3 143 79.7
A04p08800 Brassica napus HOM05D001437 ORTHO05D001297 1.4e-48 198.0 225 53.8
BraA04t16573Z Brassica rapa HOM05D001437 ORTHO05D001297 6.0e-47 192.6 225 52.9
BcaNung06997 Brassica carinata HOM05D008478 ORTHO05D027660 2.5e-45 187.2 170 65.9
A10p25030 Brassica napus HOM05D008478 ORTHO05D013784 1.3e-38 164.9 128 69.5
BraA04t15947Z Brassica rapa HOM05D008478 ORTHO05D013784 1.8e-27 127.9 93 76.3
BolC6t38509H Brassica oleracea HOM05D008478 ORTHO05D106807 3.6e-20 103.6 98 69.4
BolC9t58145H Brassica oleracea HOM05D001239 ORTHO05D000925 1.3e-17 95.1 93 61.3
BcaC07g37243 Brassica carinata HOM05D000003 ORTHO05D000925 1.7e-17 94.7 89 60.7
BolC8t47511H Brassica oleracea HOM05D001239 ORTHO05D000925 1.7e-17 94.7 89 60.7
A06p41350 Brassica napus HOM05D008478 ORTHO05D000925 1.4e-16 91.7 99 55.6
BraA07t27837Z Brassica rapa HOM05D000003 ORTHO05D000004 1.4e-16 91.7 99 55.6
A04p26810 Brassica napus HOM05D008478 ORTHO05D000925 2.4e-16 90.9 99 54.5
BcaNung06998 Brassica carinata HOM05D008478 ORTHO05D000925 7.1e-16 89.4 90 62.2
BcaB06g28514 Brassica carinata HOM05D001239 ORTHO05D000925 9.3e-16 89.0 91 59.3
BcaC02g09573 Brassica carinata HOM05D001239 ORTHO05D000925 1.6e-15 88.2 91 60.4
BolC4t26004H Brassica oleracea HOM05D008478 ORTHO05D000925 1.6e-15 88.2 91 60.4
BolC7t45952H Brassica oleracea HOM05D008478 ORTHO05D000925 2.1e-15 87.8 91 59.3
BcaC03g15329 Brassica carinata HOM05D001239 ORTHO05D000925 4.6e-15 86.7 91 58.2
BolC9t58964H Brassica oleracea HOM05D008478 ORTHO05D000925 4.6e-15 86.7 91 60.4
BolC8t52815H Brassica oleracea HOM05D001239 ORTHO05D000925 1.7e-14 84.7 98 52.0
BraA02t06627Z Brassica rapa HOM05D008478 ORTHO05D000925 1.7e-14 84.7 91 57.1
C04p60790 Brassica napus HOM05D008478 ORTHO05D100242 3.0e-14 84.0 90 55.6
BcaC01g05429 Brassica carinata HOM05D008478 ORTHO05D032540 1.1e-13 82.0 253 30.8
A02p15660 Brassica napus HOM05D008478 ORTHO05D000925 1.1e-13 82.0 91 56.0
BcaC09g51831 Brassica carinata HOM05D001239 ORTHO05D000925 2.5e-13 80.9 91 56.0
BolC1t00846H Brassica oleracea HOM05D001239 ORTHO05D000925 2.5e-13 80.9 91 56.0
BraA07t28030Z Brassica rapa HOM05D008478 ORTHO05D000925 3.6e-12 77.0 82 57.3
BcaB03g15427 Brassica carinata HOM05D001239 ORTHO05D000925 3.1e-11 73.9 94 50.0
BraA01t00376Z Brassica rapa HOM05D001239 ORTHO05D000925 5.3e-11 73.2 116 43.1
BcaB08g35549 Brassica carinata HOM05D001239 ORTHO05D000925 6.9e-11 72.8 87 54.0
C07p26790 Brassica napus HOM05D001239 ORTHO05D000925 1.5e-10 71.6 100 47.0
BolC7t43208H Brassica oleracea HOM05D001239 ORTHO05D000925 2.0e-10 71.2 100 47.0
BcaC06g34500 Brassica carinata HOM05D000003 ORTHO05D000925 5.8e-10 69.7 82 51.2
BcaB01g00822 Brassica carinata HOM05D008478 ORTHO05D000925 7.6e-10 69.3 91 51.6
C05p19460 Brassica napus HOM05D001239 ORTHO05D000925 1.3e-09 68.6 117 41.9
C02p60300 Brassica napus HOM05D008478 ORTHO05D000925 1.7e-09 68.2 74 52.7
BcaC05g25993 Brassica carinata HOM05D000003 ORTHO05D000006 2.2e-09 67.8 101 43.6
BolC7t43314H Brassica oleracea HOM05D008478 ORTHO05D000925 2.9e-09 67.4 74 52.7
BcaC06g36207 Brassica carinata HOM05D000003 ORTHO05D015459 6.4e-09 66.2 91 50.5
A07p11610 Brassica napus HOM05D008478 ORTHO05D000925 5.4e-08 63.2 63 58.7
C06p10370 Brassica napus HOM05D001239 ORTHO05D000925 9.3e-08 62.4 108 39.8
Thhalv10019721m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 9.3e-08 62.4 94 40.4
BolC6t36113H Brassica oleracea HOM05D001239 ORTHO05D000925 4.6e-07 60.1 98 42.9
Sp4g05790 Schrenkiella parvula HOM05D001239 ORTHO05D000925 7.9e-07 59.3 90 42.2
BcaC09g49173 Brassica carinata HOM05D009426 ORTHO05D014948 1.8e-06 58.2 295 28.1
BolC6t36543H Brassica oleracea HOM05D001239 ORTHO05D024661 1.8e-06 58.2 81 44.4
BraA06t26208Z Brassica rapa HOM05D008478 ORTHO05D000925 2.3e-06 57.8 53 66.0
BraA10t45304Z Brassica rapa HOM05D008478 ORTHO05D000925 2.3e-06 57.8 53 66.0
BcaB06g27369 Brassica carinata HOM05D009426 ORTHO05D014948 3.0e-06 57.4 198 33.8
BolC4t23673H Brassica oleracea HOM05D001239 ORTHO05D000925 5.1e-06 56.6 107 37.4
BolC5t33152H Brassica oleracea HOM05D001239 ORTHO05D000925 5.1e-06 56.6 96 39.6
BolC1t00889H Brassica oleracea HOM05D001239 ORTHO05D000925 6.7e-06 56.2 75 48.0


User provided reference genes

Program Settings