Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung00313 Brassica carinata HOM05D005972 ORTHO05D007548 1.5e-214 749.2 380 100.0
BraA01t02169Z Brassica rapa HOM05D005972 ORTHO05D007548 1.0e-202 709.9 380 93.7
C01p28060 Brassica napus HOM05D005972 ORTHO05D007548 4.0e-202 708.0 380 93.2
A01p22560 Brassica napus HOM05D005972 ORTHO05D007548 6.7e-202 707.2 380 93.4
BcaC09g50180 Brassica carinata HOM05D005972 ORTHO05D007548 8.8e-202 706.8 380 93.7
BolC1t02740H Brassica oleracea HOM05D005972 ORTHO05D007548 8.8e-202 706.8 380 93.7
BcaB02g07844 Brassica carinata HOM05D005972 ORTHO05D007548 7.2e-196 687.2 381 91.6
AL7G40820 Arabidopsis lyrata HOM05D005972 ORTHO05D007548 8.0e-195 683.7 380 91.1
AT4G15010 Arabidopsis thaliana HOM05D005972 ORTHO05D007548 6.8e-194 680.6 380 91.1
Thhalv10025456m.g Eutrema salsugineum HOM05D005972 ORTHO05D007548 2.0e-193 679.1 380 91.1
Carub.0007s2708 Capsella rubella HOM05D005972 ORTHO05D007548 4.4e-193 677.9 380 89.7
CARHR221700 Cardamine hirsuta HOM05D005972 ORTHO05D007548 2.8e-192 675.2 380 89.2
Aa31LG9G2330 Aethionema arabicum HOM05D005972 ORTHO05D007548 1.4e-175 619.8 380 82.4
THA.LOC104808523 Tarenaya hassleriana HOM05D005972 ORTHO05D007548 5.2e-170 601.3 380 77.6
CAN.G1513.3 Capsicum annuum HOM05D005972 ORTHO05D007548 7.1e-143 511.1 380 63.7
Nitab4.5_0000718g0290 Nicotiana tabacum HOM05D005972 ORTHO05D007548 2.3e-141 506.1 380 62.1
Nitab4.5_0012898g0010 Nicotiana tabacum HOM05D005972 ORTHO05D007548 2.3e-141 506.1 380 61.6
Sopen11g002990 Solanum pennellii HOM05D005972 ORTHO05D007548 8.7e-141 504.2 380 62.4
Rhsim05G0111400 Rhododendron simsii HOM05D005972 ORTHO05D007548 1.5e-140 503.4 380 64.5
CSS0039579 Camellia sinensis var. sinensis HOM05D005972 ORTHO05D007548 2.1e-139 499.6 381 64.0
Cfa019136 Carpinus fangiana HOM05D005972 ORTHO05D007548 2.8e-139 499.2 377 63.1
Cpa.g.sc36.20 Carica papaya HOM05D005972 ORTHO05D007548 3.6e-139 498.8 377 63.9
Solyc11g007070.2 Solanum lycopersicum HOM05D005972 ORTHO05D007548 6.2e-139 498.0 380 61.3
Thecc.10G118600 Theobroma cacao HOM05D005972 ORTHO05D007548 4.0e-138 495.4 377 63.9
COL.COLO4_27930 Corchorus olitorius HOM05D005972 ORTHO05D007548 5.3e-138 495.0 379 64.1
Duzib106G0263 Durio zibethinus HOM05D005972 ORTHO05D007548 6.9e-138 494.6 376 64.1
Gohir.A06G170300 Gossypium hirsutum HOM05D005972 ORTHO05D007548 6.9e-138 494.6 377 62.9
PGR142G0064 Punica granatum HOM05D005972 ORTHO05D007548 6.9e-138 494.6 377 63.4
Dinv24228 Davidia involucrata HOM05D001691 ORTHO05D007548 4.5e-137 491.9 364 65.7
Eucgr.H00021 Eucalyptus grandis HOM05D005972 ORTHO05D007548 5.8e-137 491.5 378 63.8
Lj9A317T77 Lonicera japonica HOM05D005972 ORTHO05D007548 9.9e-137 490.7 377 62.6
Gorai.N007100 Gossypium raimondii HOM05D005972 ORTHO05D007548 2.9e-136 489.2 377 62.1
Lsat_1_v5_gn_7_80540 Lactuca sativa HOM05D005972 ORTHO05D007548 2.9e-136 489.2 380 63.4
Gohir.D06G178100 Gossypium hirsutum HOM05D005972 ORTHO05D007548 8.4e-136 487.6 377 61.8
HanXRQChr11g0337671 Helianthus annuus HOM05D005972 ORTHO05D007548 4.2e-135 485.3 380 62.6
Prupe.1G287600 Prunus persica HOM05D005972 ORTHO05D007548 4.2e-135 485.3 376 63.0
MD13G1062400 Malus domestica HOM05D005972 ORTHO05D007548 9.3e-135 484.2 377 63.1
Thecc.04G023500 Theobroma cacao HOM05D005972 ORTHO05D007548 9.3e-135 484.2 377 62.9
Atru.chr12.548 Acer truncatum HOM05D005972 ORTHO05D007548 1.2e-134 483.8 376 62.0
RcHm_v2.0_Chr4g0438261 Rosa chinensis HOM05D005972 ORTHO05D007548 1.2e-134 483.8 376 62.5
Actinidia28072 Actinidia chinensis HOM05D005972 ORTHO05D007548 2.7e-134 482.6 380 60.8
FvH4_4g29980 Fragaria vesca HOM05D005972 ORTHO05D007548 6.0e-134 481.5 376 62.2
CiPaw.11G025800 Carya illinoinensis HOM05D005972 ORTHO05D007548 7.9e-134 481.1 377 62.6
FAN12G3642 Fragaria x ananassa HOM05D005972 ORTHO05D007548 1.8e-133 479.9 376 62.0
GSVIVG01020853001 Vitis vinifera HOM05D005972 ORTHO05D007548 1.8e-133 479.9 376 62.5
TWI73G1071 Tripterygium wilfordii HOM05D005972 ORTHO05D007548 3.0e-133 479.2 374 63.1
FAN07G1127 Fragaria x ananassa HOM05D005972 ORTHO05D007548 3.9e-133 478.8 376 62.0
FAN22G0246 Fragaria x ananassa HOM05D005972 ORTHO05D007548 8.7e-133 477.6 376 62.0
Oeu017286.1 Olea europaea HOM05D005972 ORTHO05D007548 1.1e-132 477.2 377 62.3
Ciclev10031864m.g Citrus clementina HOM05D005972 ORTHO05D007548 2.5e-132 476.1 377 62.6
Manes.16G061300 Manihot esculenta HOM05D005972 ORTHO05D007548 7.4e-132 474.6 380 61.6
QL04p050517 Quercus lobata HOM05D005972 ORTHO05D007548 7.4e-132 474.6 430 56.5
Ah.12g057320 Amaranthus hybridus HOM05D005972 ORTHO05D007548 2.8e-131 472.6 377 61.3
vmacro19910 Vaccinium macrocarpon HOM05D005972 ORTHO05D007548 2.8e-131 472.6 380 60.3
ClCG05G021510 Citrullus lanatus HOM05D005972 ORTHO05D007548 6.2e-131 471.5 380 58.9
FAN17G2742 Fragaria x ananassa HOM05D005972 ORTHO05D007548 3.1e-130 469.2 386 60.1
CsaV3_5G035730 Cucumis sativus L. HOM05D005972 ORTHO05D007548 4.0e-130 468.8 380 58.7
Lalb_Chr12g0208521 Lupinus albus HOM05D005972 ORTHO05D007548 5.3e-130 468.4 376 62.2
Sed0010539 Sechium edule HOM05D005972 ORTHO05D007548 9.9e-129 464.2 380 58.7
EL10Ac5g12767 Beta vulgaris HOM05D005972 ORTHO05D007548 4.9e-128 461.8 380 58.2
MELO3C012375.2 Cucumis melo HOM05D005972 ORTHO05D007548 4.9e-128 461.8 380 58.4
Sc22g0000350 Simmondsia chinensis HOM05D005972 ORTHO05D007548 8.4e-128 461.1 378 61.4
MSTRG.27825 Avicennia marina HOM05D005972 ORTHO05D007548 1.1e-127 460.7 380 58.9
Potri.001G222400 Populus trichocarpa HOM05D005972 ORTHO05D007548 2.4e-127 459.5 377 60.2
Migut.N01012 Erythranthe guttata HOM05D005972 ORTHO05D007548 7.1e-127 458.0 379 58.6
Psat0s2194g0120 Pisum sativum HOM05D005972 ORTHO05D007548 7.1e-127 458.0 379 59.6
Haze_07503 Corylus avellana HOM05D005972 ORTHO05D007548 3.5e-126 455.7 377 59.2
PSO782G4197 Papaver somniferum HOM05D005972 ORTHO05D007548 1.0e-125 454.1 382 58.6
CANSAT80G0182 Cannabis sativa HOM05D005972 ORTHO05D007548 1.3e-125 453.8 379 59.4
Ca_18332_v3 Cicer arietinum L. HOM05D005972 ORTHO05D007548 1.8e-125 453.4 374 59.1
PSO063G2120 Papaver somniferum HOM05D005972 ORTHO05D007548 6.7e-125 451.4 382 58.6
Medtr4g094305 Medicago truncatula HOM05D005972 ORTHO05D007548 1.1e-124 450.7 375 58.7
TPR.G31487 Trifolium pratense HOM05D005972 ORTHO05D007548 1.5e-124 450.3 376 59.3
SGA_v2.0_scaffold145G36053 Striga asiatica HOM05D005972 ORTHO05D007548 2.5e-124 449.5 377 58.4
Aqoxy4G02449 Aquilegia oxysepala HOM05D005972 ORTHO05D007548 4.3e-124 448.7 407 56.8
arahy.Tifrunner.gnm1.ann1.UKM804 Arachis hypogaea HOM05D005972 ORTHO05D007548 2.1e-123 446.4 376 58.5
arahy.Tifrunner.gnm1.ann1.41EE5L Arachis hypogaea HOM05D005972 ORTHO05D007548 1.8e-122 443.4 376 58.0
Lj4g0025997 Lotus japonicus HOM05D005972 ORTHO05D007548 9.0e-122 441.0 376 58.0
Glyma.08G075400 Glycine max HOM05D005972 ORTHO05D007548 3.4e-121 439.1 376 57.7
Glyma.05G120600 Glycine max HOM05D005972 ORTHO05D007548 5.8e-121 438.3 376 57.4
MD16G1060700 Malus domestica HOM05D005972 ORTHO05D007548 2.1e-118 429.9 367 59.1
VMungo0251G2526 Vigna mungo HOM05D005972 ORTHO05D007548 1.6e-115 420.2 399 54.4
MBI03_g03956_MAGBIO Magnolia biondii HOM05D005972 ORTHO05D007548 2.2e-115 419.9 376 57.7
SalBow6G6672 Salvia bowleyana HOM05D005972 ORTHO05D007548 5.3e-114 415.2 428 50.2
CDE04G1870 Ceratophyllum demersum HOM05D005972 ORTHO05D007548 2.0e-113 413.3 377 54.4
Peaxi162Scf00152g01221 Petunia axillaris HOM05D005972 ORTHO05D007548 2.2e-112 409.8 380 53.2
Phvul.002G206200 Phaseolus vulgaris HOM05D005972 ORTHO05D007548 1.1e-111 407.5 376 54.8
HPP92_021056 Vanilla planifolia HOM05D005972 ORTHO05D007548 1.4e-111 407.1 372 54.8
Nn6g35524 Nelumbo nucifera HOM05D005972 ORTHO05D007548 6.7e-109 398.3 380 53.9
ATR0594G009 Amborella trichopoda HOM05D005972 ORTHO05D007548 3.1e-106 389.4 376 52.1
DCAR_006139 Daucus carota HOM05D005972 ORTHO05D007548 2.9e-104 382.9 317 58.4
ATR0174G007 Amborella trichopoda HOM05D005972 ORTHO05D007548 1.8e-101 373.6 387 50.6
Zm00001eb427070 Zea mays HOM05D005972 ORTHO05D007548 1.2e-94 350.9 368 48.6
ECA236G4176 Erigeron canadensis HOM05D005972 ORTHO05D007548 1.1e-92 344.4 267 62.5
SEGI_29488 Sequoiadendron giganteum HOM05D005972 ORTHO05D007548 4.4e-92 342.4 377 45.6
Sabra16G0132100 Salix brachista HOM05D005972 ORTHO05D007548 9.1e-82 308.1 274 55.5
Mapoly0188s0014 Marchantia polymorpha HOM05D005972 ORTHO05D007548 1.6e-78 297.4 364 43.4
SHI11404 Sapria himalayana HOM05D005972 ORTHO05D007548 1.6e-78 297.4 277 54.2
unitig_747.g21237 Utricularia gibba HOM05D005972 ORTHO05D007548 3.6e-78 296.2 405 43.0
C06p16620 Brassica napus HOM05D005972 ORTHO05D007548 1.1e-74 284.6 223 70.0
BolC6t36864H Brassica oleracea HOM05D005972 ORTHO05D007548 1.1e-74 284.6 223 70.0
Cc02_g21900 Coffea canephora HOM05D005972 ORTHO05D007548 1.8e-69 267.3 191 61.8
Pp3c15_20500 Physcomitrium patens HOM05D005972 ORTHO05D007548 5.2e-69 265.8 369 38.8
Sp7g13170 Schrenkiella parvula HOM05D005972 ORTHO05D007548 1.1e-63 248.1 169 73.4
COL.COLO4_10011 Corchorus olitorius HOM05D005972 ORTHO05D007548 4.3e-63 246.1 272 48.2
A05p16900 Brassica napus HOM05D005972 ORTHO05D007548 5.8e-60 235.7 140 85.0
SpUn0490_0010 Schrenkiella parvula HOM05D005972 ORTHO05D007548 3.7e-59 233.0 124 92.7
BraA05t20595Z Brassica rapa HOM05D005972 ORTHO05D007548 7.3e-55 218.8 380 41.6
BcaC08g44257 Brassica carinata HOM05D005972 ORTHO05D024007 6.2e-54 215.7 112 91.1
Aqoxy3G01225 Aquilegia oxysepala HOM05D005972 ORTHO05D007548 1.5e-44 184.5 167 58.1
Cc02_g21910 Coffea canephora HOM05D005972 ORTHO05D007548 2.9e-43 180.3 135 65.2
Os04g0527500 Oryza sativa ssp. japonica HOM05D005972 ORTHO05D007548 4.0e-37 159.8 121 62.8
CAN.G730.4 Capsicum annuum HOM05D005972 ORTHO05D007548 4.2e-26 123.2 110 55.5
HanXRQChr15g0481161 Helianthus annuus HOM05D005972 ORTHO05D007548 9.3e-26 122.1 118 55.1
CAN.G730.17 Capsicum annuum HOM05D005972 ORTHO05D007548 7.8e-25 119.0 110 54.5
A05p16910 Brassica napus HOM05D005972 ORTHO05D007548 3.4e-20 103.6 117 52.1
CBR_g51824 Chara braunii HOM05D005972 ORTHO05D007548 7.9e-17 92.4 353 24.1
CAN.G730.12 Capsicum annuum HOM05D005972 ORTHO05D007548 4.5e-12 76.6 51 66.7
CSS0032497 Camellia sinensis var. sinensis HOM05D001087 ORTHO05D007548 3.8e-11 73.6 84 51.2
CAN.G730.21 Capsicum annuum HOM05D005972 ORTHO05D007548 4.9e-11 73.2 45 73.3
COL.COLO4_29892 Corchorus olitorius HOM05D005972 ORTHO05D007548 3.5e-09 67.0 53 64.2
Zm00001eb076720 Zea mays HOM05D005972 ORTHO05D007548 3.5e-09 67.0 116 41.4
COL.COLO4_10012 Corchorus olitorius HOM05D005972 ORTHO05D007548 1.0e-08 65.5 72 51.4
arahy.Tifrunner.gnm1.ann1.L3LYUI Arachis hypogaea HOM05D005383 ORTHO05D031493 1.3e-08 65.1 45 68.9
arahy.Tifrunner.gnm1.ann1.YJH68W Arachis hypogaea HOM05D005972 ORTHO05D083016 2.3e-08 64.3 68 50.0
CAN.G1940.2 Capsicum annuum HOM05D005972 ORTHO05D007548 3.0e-08 63.9 51 52.9
unitig_747.g21455 Utricularia gibba HOM05D000883 ORTHO05D002942 5.1e-08 63.2 132 31.1
AagrBONN_evm.TU.Sc2ySwM_228.1711 Anthoceros agrestis HOM05D000883 ORTHO05D002942 8.7e-08 62.4 127 30.7
arahy.Tifrunner.gnm1.ann1.03MD5J Arachis hypogaea HOM05D000575 ORTHO05D011349 1.5e-07 61.6 47 59.6
CDE08G1644 Ceratophyllum demersum HOM05D005972 ORTHO05D007548 1.5e-07 61.6 43 62.8
VMungo1383G2682 Vigna mungo HOM05D000177 ORTHO05D002752 1.9e-07 61.2 141 32.6
TAR623G0958 Trochodendron aralioides HOM05D000883 ORTHO05D002942 4.3e-07 60.1 132 30.3
Ciclev10028816m.g Citrus clementina HOM05D000883 ORTHO05D002942 5.7e-07 59.7 123 30.9
Actinidia34477 Actinidia chinensis HOM05D000883 ORTHO05D002942 7.4e-07 59.3 130 33.1
Glyma.07G139000 Glycine max HOM05D000177 ORTHO05D002752 9.6e-07 58.9 127 30.7
HPP92_019989 Vanilla planifolia HOM05D005548 ORTHO05D004628 1.3e-06 58.5 367 20.4
Mapoly0002s0289 Marchantia polymorpha HOM05D000177 ORTHO05D003047 1.6e-06 58.2 125 31.2
TAR636G0809 Trochodendron aralioides HOM05D000883 ORTHO05D002942 1.6e-06 58.2 132 29.5
Actinidia13161 Actinidia chinensis HOM05D000177 ORTHO05D002752 2.1e-06 57.8 138 28.3
arahy.Tifrunner.gnm1.ann1.F13RX6 Arachis hypogaea HOM05D000177 ORTHO05D002752 2.1e-06 57.8 124 31.5
Potri.016G103300 Populus trichocarpa HOM05D000177 ORTHO05D002752 2.1e-06 57.8 142 30.3
Lalb_Chr12g0209501 Lupinus albus HOM05D000177 ORTHO05D002752 2.8e-06 57.4 126 27.8
CiPaw.09G200400 Carya illinoinensis HOM05D000177 ORTHO05D002752 3.7e-06 57.0 128 30.5
Manes.08G096000 Manihot esculenta HOM05D000883 ORTHO05D002942 3.7e-06 57.0 133 28.6
FAN02G3356 Fragaria x ananassa HOM05D000177 ORTHO05D002752 4.8e-06 56.6 129 30.2
Actinidia05331 Actinidia chinensis HOM05D000177 ORTHO05D002752 6.2e-06 56.2 124 28.2
arahy.Tifrunner.gnm1.ann1.9A5XZY Arachis hypogaea HOM05D005972 ORTHO05D031493 6.2e-06 56.2 38 71.1
arahy.Tifrunner.gnm1.ann1.JD0QI3 Arachis hypogaea HOM05D000177 ORTHO05D002752 6.2e-06 56.2 124 31.5
CsaV3_4G025520 Cucumis sativus L. HOM05D000177 ORTHO05D002752 6.2e-06 56.2 147 28.6
Potri.006G091900 Populus trichocarpa HOM05D000177 ORTHO05D002752 6.2e-06 56.2 142 29.6
BcaB04g18277 Brassica carinata HOM05D001003 ORTHO05D002734 8.2e-06 55.8 37 78.4
FAN05G0646 Fragaria x ananassa HOM05D000177 ORTHO05D002752 8.2e-06 55.8 128 29.7


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