Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 3.2e-144 515.4 326 100.0
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 5.3e-131 471.5 326 93.3
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 5.3e-131 471.5 326 93.3
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 1.3e-129 466.8 326 86.5
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 7.0e-123 444.5 321 86.6
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 2.7e-122 442.6 324 81.8
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 5.9e-122 441.4 324 81.8
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 2.5e-120 436.0 324 80.6
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 3.2e-120 435.6 326 80.1
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 4.7e-119 431.8 326 79.8
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 1.5e-112 410.2 296 85.8
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 9.8e-109 397.5 321 75.4
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 1.7e-105 386.7 323 75.2
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 4.7e-87 325.5 324 65.4
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 4.0e-86 322.4 327 70.6
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 5.2e-86 322.0 329 64.4
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 8.9e-86 321.2 318 73.0
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 5.8e-85 318.5 329 62.6
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 4.9e-84 315.5 324 67.3
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 1.4e-83 313.9 324 65.1
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 2.4e-83 313.2 322 64.0
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 2.4e-83 313.2 323 61.0
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 3.2e-83 312.8 323 65.6
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 4.1e-83 312.4 332 62.0
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 7.1e-83 311.6 328 67.7
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 2.1e-82 310.1 328 67.7
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 2.1e-82 310.1 328 67.7
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 4.6e-82 308.9 330 60.9
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 4.6e-82 308.9 331 58.9
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 4.6e-82 308.9 324 63.0
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 6.0e-82 308.5 319 61.4
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 7.8e-82 308.1 324 61.7
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 1.0e-81 307.8 324 64.5
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 1.7e-81 307.0 320 67.8
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 3.9e-81 305.8 319 63.6
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 5.1e-81 305.4 326 61.3
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 8.7e-81 304.7 319 61.4
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 8.7e-81 304.7 314 57.6
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 1.1e-80 304.3 322 59.3
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 1.5e-80 303.9 328 56.4
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 3.3e-80 302.8 322 62.7
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 4.3e-80 302.4 329 62.9
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 1.6e-79 300.4 317 67.2
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 2.1e-79 300.1 323 60.7
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 3.6e-79 299.3 318 58.2
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 3.6e-79 299.3 326 67.5
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 8.1e-79 298.1 326 61.3
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 1.4e-78 297.4 318 60.1
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.8e-78 297.0 326 61.3
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 2.4e-78 296.6 324 62.3
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 3.1e-78 296.2 326 61.3
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 1.2e-77 294.3 318 61.0
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 1.2e-77 294.3 332 58.1
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 1.5e-77 293.9 332 58.1
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 2.2e-76 290.0 324 59.9
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 2.9e-76 289.7 323 59.4
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 6.4e-76 288.5 324 58.3
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 6.4e-76 288.5 326 58.6
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 1.4e-75 287.3 324 64.8
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 1.4e-75 287.3 332 63.6
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 5.4e-75 285.4 326 58.9
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 5.4e-75 285.4 323 63.2
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 9.3e-75 284.6 317 63.7
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 1.6e-74 283.9 354 51.4
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 1.6e-74 283.9 327 59.6
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 1.3e-73 280.8 319 60.5
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 1.7e-73 280.4 327 59.3
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 2.3e-73 280.0 326 59.8
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 3.9e-73 279.3 170 82.9
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 3.9e-73 279.3 321 53.9
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 5.1e-73 278.9 316 59.5
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 8.7e-73 278.1 317 59.3
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 1.5e-72 277.3 324 55.6
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 1.9e-72 276.9 314 58.9
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 5.6e-72 275.4 204 77.5
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 5.6e-72 275.4 322 57.8
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 1.3e-71 274.2 316 63.6
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 2.1e-71 273.5 314 58.3
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 2.8e-71 273.1 322 57.8
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 8.1e-71 271.6 321 57.0
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 1.1e-70 271.2 319 57.4
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 1.4e-70 270.8 349 48.1
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 3.1e-70 269.6 323 57.6
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 2.6e-69 266.5 323 56.3
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 5.8e-69 265.4 325 60.3
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 9.9e-69 264.6 325 49.5
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 9.9e-69 264.6 349 47.6
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 2.2e-68 263.5 325 60.3
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 2.9e-68 263.1 322 57.8
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 2.9e-68 263.1 321 56.4
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 1.4e-67 260.8 323 59.8
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 3.9e-65 252.7 320 60.0
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 3.3e-64 249.6 317 53.3
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 6.2e-63 245.4 321 55.8
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 8.1e-63 245.0 332 43.1
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 8.4e-60 235.0 324 48.8
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 6.0e-58 228.8 323 56.7
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 1.8e-57 227.3 327 59.0
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 2.1e-55 220.3 313 51.4
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 1.2e-53 214.5 283 58.7
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 6.5e-44 182.2 202 47.5
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 5.5e-43 179.1 169 63.3
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 4.6e-42 176.0 168 52.4
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.8e-39 166.8 205 42.4
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 4.1e-38 162.9 170 47.6
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 2.6e-37 160.2 167 48.5
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.9e-36 156.8 207 40.6
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 8.5e-36 155.2 256 38.3
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.1e-35 154.8 167 47.9
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 7.2e-35 152.1 164 47.0
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 1.0e-33 148.3 212 67.0
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 1.8e-33 147.5 169 47.3
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 8.8e-33 145.2 141 50.4
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 4.8e-31 139.4 350 44.0
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.1e-30 138.3 99 66.7
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.6e-29 133.7 99 63.6
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 1.1e-27 128.3 95 64.2
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 3.0e-25 120.2 72 76.4
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 7.4e-24 115.5 62 88.7
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 2.8e-23 113.6 100 56.0
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 1.1e-22 111.7 76 71.1
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 8.0e-18 95.5 90 53.3
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 3.0e-17 93.6 170 42.4
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 3.0e-17 93.6 96 45.8
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 3.8e-12 76.6 253 41.5
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 1.1e-11 75.1 99 41.4
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 4.2e-11 73.2 54 66.7
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 3.6e-10 70.1 126 34.1
Rhsim12G0155600 Rhododendron simsii HOM05D005795 ORTHO05D007200 8.3e-07 58.9 37 70.3
Rhsim05G0171500 Rhododendron simsii HOM05D005795 ORTHO05D007200 1.4e-06 58.2 44 61.4
SGA_v2.0_scaffold44G16633 Striga asiatica HOM05D056423 ORTHO05D406573 2.4e-06 57.4 146 29.5


User provided reference genes

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