Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung00242 Brassica carinata HOM05D005677 ORTHO05D006966 1.4e-50 202.6 101 100.0
A01p21690 Brassica napus HOM05D005677 ORTHO05D006966 4.2e-34 147.9 93 80.6
BraA01t02078Z Brassica rapa HOM05D005677 ORTHO05D006966 4.2e-34 147.9 93 80.6
Sp7g14210 Schrenkiella parvula HOM05D005677 ORTHO05D006966 9.3e-34 146.7 93 79.6
Thhalv10027491m.g Eutrema salsugineum HOM05D005677 ORTHO05D006966 6.1e-33 144.1 93 80.6
CARHR281190 Cardamine hirsuta HOM05D005677 ORTHO05D006966 1.8e-32 142.5 87 81.6
AT5G49560 Arabidopsis thaliana HOM05D005677 ORTHO05D006966 3.9e-32 141.4 95 78.9
Carub.0008s2796 Capsella rubella HOM05D005677 ORTHO05D006966 2.5e-31 138.7 87 81.6
BcaC09g50280 Brassica carinata HOM05D005677 ORTHO05D006966 4.3e-31 137.9 86 79.1
C01p27040 Brassica napus HOM05D005677 ORTHO05D006966 4.3e-31 137.9 86 79.1
BolC1t02652H Brassica oleracea HOM05D005677 ORTHO05D006966 4.3e-31 137.9 86 79.1
Aa31LG1G15100 Aethionema arabicum HOM05D005677 ORTHO05D006966 4.1e-29 131.3 83 78.3
AL8G23360 Arabidopsis lyrata HOM05D005677 ORTHO05D006966 8.5e-27 123.6 88 76.1
THA.LOC104821296 Tarenaya hassleriana HOM05D005677 ORTHO05D006966 9.7e-23 110.2 88 67.0
THA.LOC104821292 Tarenaya hassleriana HOM05D005677 ORTHO05D006966 3.7e-22 108.2 88 67.0
THA.LOC109115976 Tarenaya hassleriana HOM05D005677 ORTHO05D006966 3.7e-22 108.2 88 67.0
Aa31LG4G18970 Aethionema arabicum HOM05D005677 ORTHO05D006966 1.5e-15 86.3 66 65.2
TWI53G0229 Tripterygium wilfordii HOM05D005677 ORTHO05D006966 1.5e-15 86.3 82 56.1
COL.COLO4_22080 Corchorus olitorius HOM05D005677 ORTHO05D006966 2.6e-15 85.5 87 52.9
Gohir.A02G165300 Gossypium hirsutum HOM05D005677 ORTHO05D006966 5.7e-15 84.3 85 54.1
Thecc.01G035800 Theobroma cacao HOM05D005677 ORTHO05D006966 9.7e-15 83.6 86 55.8
Gohir.D03G014700 Gossypium hirsutum HOM05D005677 ORTHO05D006966 1.3e-14 83.2 85 54.1
arahy.Tifrunner.gnm1.ann1.6977IM Arachis hypogaea HOM05D005677 ORTHO05D006966 1.7e-14 82.8 60 65.0
Carub.0005s1724 Capsella rubella HOM05D005677 ORTHO05D006966 1.7e-14 82.8 72 59.7
Gohir.D11G190800 Gossypium hirsutum HOM05D005677 ORTHO05D006966 1.7e-14 82.8 84 53.6
Gorai.003G015000 Gossypium raimondii HOM05D005677 ORTHO05D006966 1.7e-14 82.8 85 54.1
Duzib147G0715 Durio zibethinus HOM05D005677 ORTHO05D006966 2.2e-14 82.4 85 56.5
Cpa.g.sc6.112 Carica papaya HOM05D005677 ORTHO05D006966 2.8e-14 82.0 86 55.8
CARHR160400 Cardamine hirsuta HOM05D005677 ORTHO05D006966 3.7e-14 81.6 85 54.1
Gorai.007G203300 Gossypium raimondii HOM05D005677 ORTHO05D006966 3.7e-14 81.6 84 52.4
Haze_15089 Corylus avellana HOM05D005677 ORTHO05D006966 4.8e-14 81.3 89 53.9
arahy.Tifrunner.gnm1.ann1.V4VRBH Arachis hypogaea HOM05D005677 ORTHO05D006966 1.1e-13 80.1 60 63.3
Thhalv10010630m.g Eutrema salsugineum HOM05D005677 ORTHO05D006966 1.4e-13 79.7 54 74.1
Cfa004307 Carpinus fangiana HOM05D005677 ORTHO05D006966 2.4e-13 79.0 89 50.6
Atru.chr3.573 Acer truncatum HOM05D005677 ORTHO05D006966 4.1e-13 78.2 94 50.0
BcaB01g00573 Brassica carinata HOM05D005677 ORTHO05D006966 4.1e-13 78.2 86 53.5
QL06p046093 Quercus lobata HOM05D005677 ORTHO05D006966 4.1e-13 78.2 48 75.0
CiPaw.01G038100 Carya illinoinensis HOM05D005677 ORTHO05D006966 5.3e-13 77.8 86 48.8
Hma1.2p1_0224F.1_g094650 Hydrangea macrophylla HOM05D005677 ORTHO05D006966 9.1e-13 77.0 74 52.7
BolC8t50224H Brassica oleracea HOM05D005677 ORTHO05D006966 1.2e-12 76.6 70 58.6
Gohir.A11G184300 Gossypium hirsutum HOM05D005677 ORTHO05D006966 2.6e-12 75.5 82 51.2
AT3G50850 Arabidopsis thaliana HOM05D005677 ORTHO05D006966 3.5e-12 75.1 86 53.5
C08p26060 Brassica napus HOM05D005677 ORTHO05D006966 3.5e-12 75.1 54 66.7
Ca_22266_v3 Cicer arietinum L. HOM05D005677 ORTHO05D006966 5.9e-12 74.3 49 67.3
Ca_22280_v3 Cicer arietinum L. HOM05D005677 ORTHO05D006966 5.9e-12 74.3 49 67.3
Dinv39987 Davidia involucrata HOM05D005677 ORTHO05D006966 5.9e-12 74.3 91 46.2
Psat4g092640 Pisum sativum HOM05D005677 ORTHO05D006966 7.7e-12 73.9 49 65.3
RcHm_v2.0_Chr2g0101571 Rosa chinensis HOM05D005677 ORTHO05D006966 7.7e-12 73.9 84 42.9
FAN28G0162 Fragaria x ananassa HOM05D005677 ORTHO05D006966 1.0e-11 73.6 50 68.0
Medtr8g077610 Medicago truncatula HOM05D005677 ORTHO05D006966 2.9e-11 72.0 60 61.7
Potri.007G025600 Populus trichocarpa HOM05D005677 ORTHO05D006966 2.9e-11 72.0 81 51.9
Sabra07G0022600 Salix brachista HOM05D005677 ORTHO05D006966 5.0e-11 71.2 81 51.9
FvH4_1g13310 Fragaria vesca HOM05D005677 ORTHO05D006966 6.5e-11 70.9 50 66.0
FAN19G0062 Fragaria x ananassa HOM05D005677 ORTHO05D006966 6.5e-11 70.9 50 66.0
FAN26G2780 Fragaria x ananassa HOM05D005677 ORTHO05D006966 6.5e-11 70.9 50 64.0
vmacro17831 Vaccinium macrocarpon HOM05D005677 ORTHO05D006966 6.5e-11 70.9 68 57.4
FAN23G0294 Fragaria x ananassa HOM05D005677 ORTHO05D006966 8.5e-11 70.5 49 67.3
HanXRQChr09g0261461 Helianthus annuus HOM05D005677 ORTHO05D006966 1.5e-10 69.7 91 44.0
Actinidia19186 Actinidia chinensis HOM05D005677 ORTHO05D006966 1.9e-10 69.3 48 68.8
Ciclev10026228m.g Citrus clementina HOM05D005677 ORTHO05D006966 1.9e-10 69.3 56 60.7
Lalb_Chr16g0388501 Lupinus albus HOM05D005677 ORTHO05D006966 1.9e-10 69.3 86 47.7
Phvul.003G253400 Phaseolus vulgaris HOM05D005677 ORTHO05D006966 1.9e-10 69.3 87 41.4
Lsat_1_v5_gn_4_152101 Lactuca sativa HOM05D005677 ORTHO05D006966 2.5e-10 68.9 98 44.9
Prupe.7G154600 Prunus persica HOM05D005677 ORTHO05D006966 2.5e-10 68.9 69 52.2
VMungo0251G0356 Vigna mungo HOM05D005677 ORTHO05D006966 2.5e-10 68.9 88 43.2
CANSAT01G0942 Cannabis sativa HOM05D005677 ORTHO05D006966 3.2e-10 68.6 87 42.5
TPR.G24140 Trifolium pratense HOM05D005677 ORTHO05D006966 4.2e-10 68.2 49 61.2
Psat4g079800 Pisum sativum HOM05D005677 ORTHO05D006966 5.5e-10 67.8 89 46.1
Sed0020674 Sechium edule HOM05D005677 ORTHO05D006966 9.4e-10 67.0 59 61.0
CSS0028163 Camellia sinensis var. sinensis HOM05D005677 ORTHO05D006966 1.6e-09 66.2 64 53.1
Lj2P453T29 Lonicera japonica HOM05D005677 ORTHO05D006966 1.6e-09 66.2 53 66.0
MD15G1261800 Malus domestica HOM05D005677 ORTHO05D006966 2.1e-09 65.9 68 51.5
Migut.H00989 Erythranthe guttata HOM05D005677 ORTHO05D006966 3.6e-09 65.1 55 58.2
LjContig00448g0024692 Lotus japonicus HOM05D005677 ORTHO05D006966 3.6e-09 65.1 90 43.3
Glyma.02G057000 Glycine max HOM05D005677 ORTHO05D006966 6.1e-09 64.3 88 43.2
PGR102G2535 Punica granatum HOM05D005677 ORTHO05D006966 8.0e-09 63.9 91 40.7
Oeu042263.1 Olea europaea HOM05D005677 ORTHO05D006966 1.4e-08 63.2 36 80.6
MELO3C007826.2 Cucumis melo HOM05D005677 ORTHO05D006966 1.8e-08 62.8 55 63.6
CsaV3_6G046230 Cucumis sativus L. HOM05D005677 ORTHO05D006966 1.8e-08 62.8 52 61.5
ECA232G2278 Erigeron canadensis HOM05D005677 ORTHO05D006966 1.8e-08 62.8 61 50.8
ClCG01G019540 Citrullus lanatus HOM05D005677 ORTHO05D006966 3.0e-08 62.0 72 50.0
Oeu041446.1 Olea europaea HOM05D005677 ORTHO05D006966 3.0e-08 62.0 43 67.4
DCAR_025942 Daucus carota HOM05D005677 ORTHO05D006966 4.0e-08 61.6 54 57.4
DCAR_025564 Daucus carota HOM05D005677 ORTHO05D006966 6.7e-08 60.8 89 42.7
Eucgr.H01270 Eucalyptus grandis HOM05D005677 ORTHO05D006966 6.7e-08 60.8 50 52.0
Eucgr.L02813 Eucalyptus grandis HOM05D005677 ORTHO05D006966 6.7e-08 60.8 50 52.0
Nitab4.5_0001385g0030 Nicotiana tabacum HOM05D005677 ORTHO05D006966 1.1e-07 60.1 84 44.0
Migut.L00520 Erythranthe guttata HOM05D005677 ORTHO05D006966 1.5e-07 59.7 52 59.6
Manes.01G135600 Manihot esculenta HOM05D005677 ORTHO05D006966 1.5e-07 59.7 63 55.6
Nitab4.5_0000178g0070 Nicotiana tabacum HOM05D005677 ORTHO05D006966 2.6e-07 58.9 41 68.3
CAN.G358.85 Capsicum annuum HOM05D005677 ORTHO05D006966 3.3e-07 58.5 41 70.7
Rhsim08G0117300 Rhododendron simsii HOM05D000412 ORTHO05D002774 3.3e-07 58.5 48 60.4
PGSC0003DMG400003597 Solanum tuberosum HOM05D005677 ORTHO05D006966 3.3e-07 58.5 64 46.9
Nn2g12315 Nelumbo nucifera HOM05D005677 ORTHO05D006966 4.4e-07 58.2 48 60.4
CDE02G2571 Ceratophyllum demersum HOM05D005677 ORTHO05D006966 5.7e-07 57.8 78 43.6
Peaxi162Scf00366g10014 Petunia axillaris HOM05D005677 ORTHO05D006966 5.7e-07 57.8 55 52.7
Solyc02g085210.1 Solanum lycopersicum HOM05D005677 ORTHO05D006966 5.7e-07 57.8 64 50.0
EL10Ac6g15562 Beta vulgaris HOM05D005677 ORTHO05D006966 7.5e-07 57.4 48 47.9
Cc06_g21220 Coffea canephora HOM05D005677 ORTHO05D006966 7.5e-07 57.4 53 56.6
Sopen02g029910 Solanum pennellii HOM05D005677 ORTHO05D006966 7.5e-07 57.4 41 68.3
Ah.03g140850 Amaranthus hybridus HOM05D005677 ORTHO05D006966 1.7e-06 56.2 56 48.2
PSO210G3110 Papaver somniferum HOM05D005677 ORTHO05D006966 2.2e-06 55.8 50 52.0
PSO731G0124 Papaver somniferum HOM05D005677 ORTHO05D006966 2.2e-06 55.8 50 52.0
TAR625G0490 Trochodendron aralioides HOM05D005677 ORTHO05D006966 2.2e-06 55.8 69 43.5
SalBow5G4467 Salvia bowleyana HOM05D005677 ORTHO05D006966 4.8e-06 54.7 42 59.5
unitig_32.g11368 Utricularia gibba HOM05D005677 ORTHO05D006966 6.3e-06 54.3 38 65.8


User provided reference genes

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