Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung00232 Brassica carinata HOM05D002249 ORTHO05D002443 2.8e-69 265.4 155 100.0
CARHR290690 Cardamine hirsuta HOM05D002249 ORTHO05D002443 1.2e-35 153.7 137 75.2
Sp7g14540 Schrenkiella parvula HOM05D002249 ORTHO05D002443 2.8e-29 132.5 148 66.9
BcaC06g32981 Brassica carinata HOM05D002249 ORTHO05D002443 4.8e-29 131.7 150 62.7
BcaC06g33471 Brassica carinata HOM05D002249 ORTHO05D002443 4.8e-29 131.7 150 62.7
Thhalv10024634m.g Eutrema salsugineum HOM05D002249 ORTHO05D002443 6.2e-29 131.3 119 67.2
C07p47620 Brassica napus HOM05D002249 ORTHO05D002443 1.4e-28 130.2 150 62.7
BolC7t45286H Brassica oleracea HOM05D002249 ORTHO05D002443 1.4e-28 130.2 150 62.7
A03p49560 Brassica napus HOM05D002249 ORTHO05D002443 1.8e-28 129.8 137 60.6
BraA03t14054Z Brassica rapa HOM05D002249 ORTHO05D002443 3.4e-27 125.6 137 65.7
AL7G39120 Arabidopsis lyrata HOM05D002249 ORTHO05D002443 4.5e-27 125.2 114 67.5
AT4G16070 Arabidopsis thaliana HOM05D002249 ORTHO05D002443 5.8e-27 124.8 125 63.2
Carub.0007s2555 Capsella rubella HOM05D002249 ORTHO05D002443 1.9e-22 109.8 131 65.6
THA.LOC104802590 Tarenaya hassleriana HOM05D002249 ORTHO05D002443 3.1e-20 102.4 103 63.1
Aa31LG10G6130 Aethionema arabicum HOM05D002249 ORTHO05D002443 2.0e-19 99.8 112 57.1
Manes.15G009200 Manihot esculenta HOM05D002249 ORTHO05D002443 8.2e-13 77.8 129 47.3
FvH4_4g18880 Fragaria vesca HOM05D002249 ORTHO05D002443 5.3e-12 75.1 110 49.1
FAN12G2948 Fragaria x ananassa HOM05D002249 ORTHO05D002443 5.3e-12 75.1 110 49.1
Cpa.g.sc9.117 Carica papaya HOM05D002249 ORTHO05D002443 9.0e-12 74.3 108 45.4
Gohir.A09G063300 Gossypium hirsutum HOM05D002249 ORTHO05D002443 1.2e-11 73.9 116 47.4
Atru.chr4.2921 Acer truncatum HOM05D002249 ORTHO05D002443 1.5e-11 73.6 105 49.5
Ciclev10004534m.g Citrus clementina HOM05D002249 ORTHO05D002443 1.5e-11 73.6 129 40.3
FAN07G2820 Fragaria x ananassa HOM05D002249 ORTHO05D002443 1.5e-11 73.6 110 48.2
Gohir.D09G062200 Gossypium hirsutum HOM05D002249 ORTHO05D002443 1.5e-11 73.6 132 43.2
FAN12G2630 Fragaria x ananassa HOM05D002249 ORTHO05D002443 2.0e-11 73.2 110 49.1
FAN17G1551 Fragaria x ananassa HOM05D002249 ORTHO05D002443 2.0e-11 73.2 110 48.2
Potri.008G211200 Populus trichocarpa HOM05D002249 ORTHO05D002443 2.0e-11 73.2 129 43.4
RcHm_v2.0_Chr4g0423781 Rosa chinensis HOM05D002249 ORTHO05D002443 2.0e-11 73.2 96 52.1
Ah.04g155170 Amaranthus hybridus HOM05D002249 ORTHO05D002443 5.9e-11 71.6 131 38.9
CANSAT78G0720 Cannabis sativa HOM05D002249 ORTHO05D002443 5.9e-11 71.6 115 47.0
TWI73G0517 Tripterygium wilfordii HOM05D002249 ORTHO05D002443 5.9e-11 71.6 128 39.8
Gorai.006G077000 Gossypium raimondii HOM05D002249 ORTHO05D002443 7.7e-11 71.2 132 42.4
PGSC0003DMG400018052 Solanum tuberosum HOM05D002249 ORTHO05D002443 7.7e-11 71.2 146 36.3
Thecc.04G290800 Theobroma cacao HOM05D002249 ORTHO05D002443 7.7e-11 71.2 116 48.3
Potri.010G005800 Populus trichocarpa HOM05D002249 ORTHO05D002443 1.0e-10 70.9 129 41.9
Duzib151G0777 Durio zibethinus HOM05D002249 ORTHO05D002443 1.3e-10 70.5 129 42.6
Cc03_g01390 Coffea canephora HOM05D002249 ORTHO05D002443 1.7e-10 70.1 129 41.1
Hma1.2p1_0013F.1_g009100 Hydrangea macrophylla HOM05D002249 ORTHO05D002443 2.9e-10 69.3 115 45.2
Hma1.2p1_1352F.1_g277560 Hydrangea macrophylla HOM05D002249 ORTHO05D002443 5.0e-10 68.6 115 45.2
MD13G1162400 Malus domestica HOM05D002249 ORTHO05D002443 5.0e-10 68.6 93 52.7
Nitab4.5_0000616g0110 Nicotiana tabacum HOM05D002249 ORTHO05D002443 8.5e-10 67.8 146 34.9
Cfa015447 Carpinus fangiana HOM05D002249 ORTHO05D002443 1.1e-09 67.4 128 39.8
CiPaw.01G144500 Carya illinoinensis HOM05D002249 ORTHO05D002443 1.1e-09 67.4 129 41.9
Gohir.A01G033300 Gossypium hirsutum HOM05D002249 ORTHO05D002443 1.1e-09 67.4 110 41.8
Eucgr.H03970 Eucalyptus grandis HOM05D002249 ORTHO05D002443 1.4e-09 67.0 129 41.1
MD16G1162200 Malus domestica HOM05D002249 ORTHO05D002443 1.4e-09 67.0 125 43.2
Actinidia18635 Actinidia chinensis HOM05D002249 ORTHO05D002443 1.9e-09 66.6 114 40.4
CAN.G14.9 Capsicum annuum HOM05D002249 ORTHO05D002443 1.9e-09 66.6 146 36.3
Haze_01145 Corylus avellana HOM05D002249 ORTHO05D002443 1.9e-09 66.6 128 39.8
Glyma.09G041200 Glycine max HOM05D002249 ORTHO05D002443 1.9e-09 66.6 114 40.4
QL06p010877 Quercus lobata HOM05D002249 ORTHO05D002443 1.9e-09 66.6 129 43.4
COL.COLO4_34699 Corchorus olitorius HOM05D002249 ORTHO05D002443 2.5e-09 66.2 130 38.5
PGR004G2212 Punica granatum HOM05D002249 ORTHO05D002443 2.5e-09 66.2 130 40.8
Gohir.D01G023505 Gossypium hirsutum HOM05D002249 ORTHO05D002443 3.2e-09 65.9 110 41.8
Nitab4.5_0000361g0070 Nicotiana tabacum HOM05D002249 ORTHO05D002443 4.2e-09 65.5 146 34.9
Gorai.002G029000 Gossypium raimondii HOM05D002249 ORTHO05D002443 7.2e-09 64.7 110 40.9
Prupe.1G129700 Prunus persica HOM05D002249 ORTHO05D002443 7.2e-09 64.7 110 41.8
Glyma.17G029400 Glycine max HOM05D002249 ORTHO05D002443 9.4e-09 64.3 104 44.2
Psat1g156120 Pisum sativum HOM05D002249 ORTHO05D002443 1.6e-08 63.5 116 41.4
Peaxi162Scf00065g00099 Petunia axillaris HOM05D002249 ORTHO05D002443 3.6e-08 62.4 133 37.6
Hund03088 Selenicereus undatus HOM05D002249 ORTHO05D002443 3.6e-08 62.4 116 41.4
ClCG06G004880 Citrullus lanatus HOM05D002249 ORTHO05D002443 4.6e-08 62.0 128 38.3
Lj6C682G22 Lonicera japonica HOM05D002249 ORTHO05D002443 6.1e-08 61.6 127 40.2
Oeu016257.1 Olea europaea HOM05D002249 ORTHO05D002443 6.1e-08 61.6 117 40.2
Lj6g0025091 Lotus japonicus HOM05D002249 ORTHO05D002443 7.9e-08 61.2 101 41.6
Medtr2g435530 Medicago truncatula HOM05D002249 ORTHO05D002443 7.9e-08 61.2 115 38.3
GSVIVG01035091001 Vitis vinifera HOM05D002249 ORTHO05D002443 7.9e-08 61.2 91 48.4
EL10Ac3g04941 Beta vulgaris HOM05D002249 ORTHO05D002443 1.0e-07 60.8 128 34.4
Nn3g21573 Nelumbo nucifera HOM05D002249 ORTHO05D002443 1.0e-07 60.8 105 43.8
Lsat_1_v5_gn_6_76180 Lactuca sativa HOM05D002249 ORTHO05D002443 1.4e-07 60.5 157 33.1
Ca_01906_v3 Cicer arietinum L. HOM05D002249 ORTHO05D002443 1.8e-07 60.1 102 39.2
Lalb_Chr20g0121151 Lupinus albus HOM05D002249 ORTHO05D002443 2.3e-07 59.7 115 37.4
CSS0044459 Camellia sinensis var. sinensis HOM05D002249 ORTHO05D002443 6.7e-07 58.2 120 39.2
arahy.Tifrunner.gnm1.ann1.L26R3M Arachis hypogaea HOM05D002249 ORTHO05D002443 2.0e-06 56.6 92 45.7
Lalb_Chr12g0201141 Lupinus albus HOM05D002249 ORTHO05D002443 2.0e-06 56.6 119 37.8
TPR.G24641 Trifolium pratense HOM05D002249 ORTHO05D002443 2.5e-06 56.2 99 39.4
arahy.Tifrunner.gnm1.ann1.07091Z Arachis hypogaea HOM05D002249 ORTHO05D002443 5.7e-06 55.1 92 44.6
arahy.Tifrunner.gnm1.ann1.ATFG0I Arachis hypogaea HOM05D002249 ORTHO05D002443 5.7e-06 55.1 103 38.8
arahy.Tifrunner.gnm1.ann1.I1DE2P Arachis hypogaea HOM05D002249 ORTHO05D002443 5.7e-06 55.1 103 38.8
MBI19_g08249_MAGBIO Magnolia biondii HOM05D002249 ORTHO05D002443 5.7e-06 55.1 113 38.1
PSO210G4294 Papaver somniferum HOM05D002249 ORTHO05D002443 5.7e-06 55.1 123 39.8
Sed0026706 Sechium edule HOM05D002249 ORTHO05D002443 5.7e-06 55.1 114 35.1
MELO3C021304.2 Cucumis melo HOM05D002249 ORTHO05D002443 9.7e-06 54.3 108 37.0


User provided reference genes

Program Settings