Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung00180 Brassica carinata HOM05D007337 ORTHO05D004972 8.9e-60 233.4 118 100.0
BcaC09g50365 Brassica carinata HOM05D007337 ORTHO05D004972 8.9e-28 127.1 62 100.0
C01p26190 Brassica napus HOM05D007337 ORTHO05D004972 8.9e-28 127.1 62 100.0
BolC1t02562H Brassica oleracea HOM05D007337 ORTHO05D004972 8.9e-28 127.1 62 100.0
A01p20860 Brassica napus HOM05D007337 ORTHO05D004972 7.6e-27 124.0 61 98.4
BraA01t02004Z Brassica rapa HOM05D007337 ORTHO05D004972 1.7e-26 122.9 61 96.7
BcaC09g50366 Brassica carinata HOM05D007337 ORTHO05D004972 8.4e-26 120.6 62 93.5
BcaNung00176 Brassica carinata HOM05D007337 ORTHO05D004972 8.4e-26 120.6 62 93.5
BcaNung00177 Brassica carinata HOM05D007337 ORTHO05D004972 2.7e-24 115.5 61 90.2
AT2G03020 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 1.1e-22 110.2 62 83.9
Sp7g15150 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.1e-22 110.2 62 83.9
Carub.0007s2493 Capsella rubella HOM05D007337 ORTHO05D004972 5.6e-22 107.8 70 74.3
BcaC01g04975 Brassica carinata HOM05D007337 ORTHO05D004972 7.3e-22 107.5 67 79.1
C03p31540 Brassica napus HOM05D007337 ORTHO05D004972 7.3e-22 107.5 67 79.1
AL1G32140 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.3e-21 106.7 61 80.3
BcaC06g33497 Brassica carinata HOM05D007337 ORTHO05D004972 1.3e-21 106.7 59 86.4
AT4G16545 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 2.1e-21 105.9 61 77.0
BcaC03g13098 Brassica carinata HOM05D007337 ORTHO05D004972 2.1e-21 105.9 68 76.5
BolC2t05997H Brassica oleracea HOM05D007337 ORTHO05D004972 2.1e-21 105.9 68 76.5
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 4.8e-21 104.8 59 84.7
AL7G38340 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 6.2e-21 104.4 62 79.0
CARHR223020 Cardamine hirsuta HOM05D007337 ORTHO05D004972 6.2e-21 104.4 61 80.3
BolC7t45327H Brassica oleracea HOM05D007337 ORTHO05D004972 1.4e-20 103.2 67 80.6
BolC3t15498H Brassica oleracea HOM05D007337 ORTHO05D004972 1.8e-20 102.8 59 81.4
Carub.0007s2489 Capsella rubella HOM05D007337 ORTHO05D004972 2.4e-20 102.4 70 71.4
Thhalv10026831m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 2.4e-20 102.4 61 80.3
BcaC06g33495 Brassica carinata HOM05D007337 ORTHO05D004972 5.3e-20 101.3 59 83.1
BcaC07g37998 Brassica carinata HOM05D007337 ORTHO05D004972 5.3e-20 101.3 61 78.7
BcaNung02862 Brassica carinata HOM05D007337 ORTHO05D004972 5.3e-20 101.3 59 83.1
BraA03t14092Z Brassica rapa HOM05D007337 ORTHO05D004972 9.0e-20 100.5 64 79.7
A08p12570 Brassica napus HOM05D007337 ORTHO05D004972 1.2e-19 100.1 61 77.0
BraA08t33248Z Brassica rapa HOM05D007337 ORTHO05D004972 1.2e-19 100.1 61 77.0
Thhalv10000293m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 1.2e-19 100.1 61 73.8
BolC8t48380H Brassica oleracea HOM05D007337 ORTHO05D004972 1.5e-19 99.8 61 77.0
Carub.0007s2491 Capsella rubella HOM05D007337 ORTHO05D004972 1.5e-19 99.8 70 68.6
CARHR215530 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.5e-19 99.8 61 77.0
A01p20850 Brassica napus HOM05D007337 ORTHO05D004972 2.0e-19 99.4 60 76.7
BraA01t02003Z Brassica rapa HOM05D007337 ORTHO05D004972 2.6e-19 99.0 60 76.7
Carub.0007s2492 Capsella rubella HOM05D007337 ORTHO05D004972 2.6e-19 99.0 61 73.8
AL7G38320 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.3e-18 96.7 69 69.6
BcaC09g50370 Brassica carinata HOM05D007337 ORTHO05D004972 1.7e-18 96.3 60 73.3
C01p26180 Brassica napus HOM05D007337 ORTHO05D004972 1.7e-18 96.3 60 73.3
BolC1t02561H Brassica oleracea HOM05D007337 ORTHO05D004972 1.7e-18 96.3 60 73.3
Sp7g15140 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.7e-18 96.3 61 78.7
Sp7g15130 Schrenkiella parvula HOM05D007337 ORTHO05D004972 4.9e-18 94.7 61 70.5
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 1.1e-17 93.6 59 79.7
BcaNung02865 Brassica carinata HOM05D007337 ORTHO05D004972 2.4e-17 92.4 61 75.4
A03p49980 Brassica napus HOM05D007337 ORTHO05D004972 2.4e-17 92.4 61 75.4
BraA03t14091Z Brassica rapa HOM05D007337 ORTHO05D004972 2.4e-17 92.4 61 75.4
Thhalv10026050m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 2.4e-17 92.4 62 72.6
Thhalv10026211m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 2.4e-17 92.4 62 71.0
BcaC06g33493 Brassica carinata HOM05D007337 ORTHO05D004972 4.2e-17 91.7 61 73.8
BcaC09g50367 Brassica carinata HOM05D007337 ORTHO05D004972 1.6e-16 89.7 59 71.2
BcaC09g50368 Brassica carinata HOM05D007337 ORTHO05D004972 1.6e-16 89.7 59 71.2
BcaNung00175 Brassica carinata HOM05D007337 ORTHO05D004972 1.6e-16 89.7 59 71.2
Sp7g15120 Schrenkiella parvula HOM05D007337 ORTHO05D004972 2.1e-16 89.4 60 70.0
Aa31LG2G12670 Aethionema arabicum HOM05D007337 ORTHO05D004972 2.7e-16 89.0 61 65.6
THA.LOC104815492 Tarenaya hassleriana HOM05D007337 ORTHO05D004972 3.3e-14 82.0 70 58.6
BcaC06g33489 Brassica carinata HOM05D007337 ORTHO05D004972 4.3e-14 81.6 61 62.3
BcaNung02867 Brassica carinata HOM05D007337 ORTHO05D004972 4.3e-14 81.6 61 62.3
C07p47990 Brassica napus HOM05D007337 ORTHO05D004972 4.3e-14 81.6 61 62.3
BolC7t45322H Brassica oleracea HOM05D007337 ORTHO05D004972 4.3e-14 81.6 61 62.3
BcaC06g33478 Brassica carinata HOM05D007337 ORTHO05D004972 7.4e-14 80.9 62 66.1
C07p47780 Brassica napus HOM05D007337 ORTHO05D004972 7.4e-14 80.9 62 66.1
BolC7t45302H Brassica oleracea HOM05D007337 ORTHO05D004972 7.4e-14 80.9 62 66.1
A02p20510 Brassica napus HOM05D007337 ORTHO05D004972 2.8e-13 79.0 62 59.7
C02p33330 Brassica napus HOM05D007337 ORTHO05D004972 4.8e-13 78.2 62 58.1
BcaC03g15651 Brassica carinata HOM05D007337 ORTHO05D004972 1.4e-12 76.6 62 58.1
BolC2t09369H Brassica oleracea HOM05D007337 ORTHO05D004972 1.4e-12 76.6 62 58.1
BcaNung02864 Brassica carinata HOM05D007337 ORTHO05D004972 4.0e-12 75.1 65 56.9
CARHR223030 Cardamine hirsuta HOM05D007337 ORTHO05D004972 9.0e-12 73.9 61 62.3
AL7G38310 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 2.6e-11 72.4 53 69.8
BcaC06g33494 Brassica carinata HOM05D007337 ORTHO05D004972 3.4e-11 72.0 65 53.8
A03p49990 Brassica napus HOM05D007337 ORTHO05D004972 3.4e-11 72.0 65 53.8
A03p49960 Brassica napus HOM05D007337 ORTHO05D004972 4.5e-11 71.6 62 61.3
BraA03t14088Z Brassica rapa HOM05D007337 ORTHO05D004972 4.5e-11 71.6 62 61.3
Carub.0007s2487 Capsella rubella HOM05D007337 ORTHO05D004972 4.5e-11 71.6 63 57.1
Carub.0007s2488 Capsella rubella HOM05D007337 ORTHO05D004972 4.5e-11 71.6 61 57.4
AT4G16550 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 5.8e-11 71.2 63 55.6
Sp7g15160 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.7e-10 69.7 61 55.7
C07p48020 Brassica napus HOM05D007337 ORTHO05D004972 2.2e-10 69.3 57 56.1
BolC7t45326H Brassica oleracea HOM05D007337 ORTHO05D004972 2.2e-10 69.3 57 56.1
Thhalv10026955m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 2.9e-10 68.9 60 56.7
AL7G38280 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 3.8e-10 68.6 63 52.4
AL7G38300 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 4.9e-10 68.2 60 55.0
AT4G16560 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 8.4e-10 67.4 57 57.9
A03p49970 Brassica napus HOM05D007337 ORTHO05D004972 1.1e-09 67.0 60 58.3
BraA03t14089Z Brassica rapa HOM05D007337 ORTHO05D004972 1.1e-09 67.0 60 58.3
BolC7t45324H Brassica oleracea HOM05D007337 ORTHO05D004972 2.4e-09 65.9 58 58.6
BcaC06g33490 Brassica carinata HOM05D007337 ORTHO05D004972 3.5e-08 62.0 51 60.8
C07p48000 Brassica napus HOM05D007337 ORTHO05D004972 3.5e-08 62.0 51 60.8


User provided reference genes

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