Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 1.4e-83 312.8 148 100.0
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 5.7e-80 300.8 148 95.3
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 1.5e-77 292.7 147 93.9
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 5.9e-77 290.8 147 93.9
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 8.2e-71 270.4 151 86.8
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 6.9e-70 267.3 146 85.6
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 1.2e-69 266.5 148 85.1
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 1.5e-69 266.2 146 86.3
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 2.0e-69 265.8 148 85.1
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 3.7e-63 245.0 145 80.0
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 1.8e-62 242.7 149 76.5
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 4.1e-62 241.5 149 78.5
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 1.2e-61 240.0 131 87.0
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 7.7e-61 237.3 125 91.2
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 1.5e-59 233.0 117 94.0
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 8.0e-58 227.3 143 76.9
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 4.0e-57 224.9 143 74.8
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 8.8e-57 223.8 141 74.5
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 8.8e-57 223.8 144 73.6
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 8.8e-57 223.8 144 73.6
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 1.2e-56 223.4 149 72.5
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 9.7e-56 220.3 143 72.7
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 9.7e-56 220.3 148 75.0
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.3e-55 219.9 151 74.8
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 2.2e-55 219.2 148 73.6
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.2e-55 219.2 151 74.2
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 4.8e-55 218.0 146 74.0
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 1.1e-54 216.9 138 75.4
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 1.4e-54 216.5 145 72.4
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 1.8e-54 216.1 147 74.8
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.1e-54 215.3 148 72.3
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 2.7e-53 212.2 141 70.9
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 2.7e-53 212.2 141 70.9
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 5.9e-53 211.1 151 71.5
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 2.9e-52 208.8 141 68.8
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 2.9e-52 208.8 143 65.7
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 3.8e-52 208.4 143 67.8
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 3.8e-52 208.4 143 71.3
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 6.5e-52 207.6 143 69.2
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 6.5e-52 207.6 144 68.8
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 8.5e-52 207.2 135 75.6
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 8.5e-52 207.2 144 70.1
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 8.5e-52 207.2 142 69.0
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 1.5e-51 206.5 141 68.1
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 2.5e-51 205.7 137 71.5
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 2.5e-51 205.7 140 68.6
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 2.5e-51 205.7 148 69.6
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 3.2e-51 205.3 140 68.6
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 5.5e-51 204.5 136 69.9
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 7.2e-51 204.1 146 68.5
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 9.4e-51 203.8 144 67.4
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 1.2e-50 203.4 144 67.4
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 1.2e-50 203.4 142 68.3
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 2.1e-50 202.6 143 68.5
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 2.1e-50 202.6 135 69.6
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 2.1e-50 202.6 150 66.0
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 2.7e-50 202.2 152 66.4
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 4.7e-50 201.4 143 66.4
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 8.0e-50 200.7 143 65.7
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 1.4e-49 199.9 142 69.7
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 2.3e-49 199.1 118 78.8
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 1.5e-48 196.4 137 67.9
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 1.5e-48 196.4 137 67.2
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 2.0e-48 196.1 117 76.9
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 2.6e-48 195.7 116 78.4
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 2.6e-48 195.7 143 65.7
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 5.7e-48 194.5 140 67.9
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 2.2e-47 192.6 146 62.3
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 3.7e-47 191.8 117 78.6
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 4.8e-47 191.4 146 61.6
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 1.8e-46 189.5 175 54.3
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 3.1e-46 188.7 117 76.1
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 4.1e-46 188.3 170 57.1
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 2.7e-45 185.7 142 62.0
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 2.5e-43 179.1 137 63.5
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 4.2e-43 178.3 104 77.9
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 4.7e-42 174.9 143 60.8
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 1.4e-41 173.3 138 63.0
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 1.4e-41 173.3 115 73.0
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 3.0e-41 172.2 160 56.2
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 2.6e-40 169.1 101 79.2
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 4.4e-40 168.3 115 71.3
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 2.2e-39 166.0 114 71.1
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 4.9e-39 164.9 101 78.2
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 4.9e-39 164.9 139 58.3
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 1.8e-38 162.9 256 39.5
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 9.2e-38 160.6 91 85.7
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 9.2e-38 160.6 108 72.2
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 4.3e-35 151.8 101 65.3
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 4.7e-34 148.3 146 54.8
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 2.3e-33 146.0 149 53.0
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 3.0e-33 145.6 104 68.3
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 1.2e-32 143.7 160 49.4
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 1.3e-31 140.2 141 47.5
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 2.9e-31 139.0 89 73.0
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 1.1e-30 137.1 75 81.3
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.2e-30 135.6 108 65.7
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 3.5e-29 132.1 143 48.3
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 1.0e-28 130.6 141 44.0
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.0e-28 129.0 85 72.9
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 5.0e-28 128.3 115 51.3
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 3.6e-26 122.1 117 54.7
GSVIVG01001319001 Vitis vinifera HOM05D007031 ORTHO05D008815 8.0e-26 120.9 87 69.0
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 1.4e-25 120.2 144 47.9
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 6.8e-25 117.9 84 72.6
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 4.4e-24 115.2 105 53.3
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 2.9e-23 112.5 131 43.5
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 6.4e-23 111.3 129 46.5
Thecc.03G252200 Theobroma cacao HOM05D007031 ORTHO05D008815 5.1e-20 101.7 82 63.4
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 1.9e-19 99.8 115 42.6
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 1.9e-19 99.8 130 46.2
Medtr5g012525 Medicago truncatula HOM05D007031 ORTHO05D008815 2.1e-18 96.3 60 73.3
SEGI_18261 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 2.1e-18 96.3 86 57.0
FAN05G5584 Fragaria x ananassa HOM05D007031 ORTHO05D008815 8.3e-15 84.3 83 54.2
COL.COLO4_37184 Corchorus olitorius HOM05D007031 ORTHO05D008815 2.4e-06 56.2 46 65.2
Cre06.g273000 Chlamydomonas reinhardtii HOM05D002397 ORTHO05D002667 7.1e-06 54.7 108 32.4
AagrBONN_evm.TU.Sc2ySwM_344.2061 Anthoceros agrestis HOM05D002397 ORTHO05D002667 9.2e-06 54.3 105 29.5


User provided reference genes

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