Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g52246 Brassica carinata HOM05D000509 ORTHO05D006393 4.5e-33 144.8 127 100.0
BcaC02g10220 Brassica carinata HOM05D000509 ORTHO05D006393 2.0e-25 119.4 68 92.6
C04p31370 Brassica napus HOM05D000509 ORTHO05D006393 2.0e-25 119.4 68 92.6
BolC4t24686H Brassica oleracea HOM05D000509 ORTHO05D006393 2.7e-22 109.0 71 81.7
A04p01140 Brassica napus HOM05D000509 ORTHO05D006393 8.7e-21 104.0 69 84.1
BraA04t15830Z Brassica rapa HOM05D000509 ORTHO05D006393 8.7e-21 104.0 69 84.1
Carub.0005s2804 Capsella rubella HOM05D000509 ORTHO05D006393 5.9e-17 91.3 126 84.9
Thhalv10006311m.g Eutrema salsugineum HOM05D000509 ORTHO05D006393 5.9e-17 91.3 131 67.2
A09p53420 Brassica napus HOM05D000509 ORTHO05D006393 2.2e-16 89.4 71 73.2
BraA09t40768Z Brassica rapa HOM05D000509 ORTHO05D006393 2.2e-16 89.4 71 73.2
AL5G43630 Arabidopsis lyrata HOM05D000509 ORTHO05D006393 2.7e-14 82.4 126 68.3
Sp5g02030 Schrenkiella parvula HOM05D000509 ORTHO05D006393 7.9e-14 80.9 126 60.3
BcaC07g40634 Brassica carinata HOM05D000509 ORTHO05D006393 1.0e-13 80.5 64 73.4
C08p36230 Brassica napus HOM05D000509 ORTHO05D006393 1.4e-13 80.1 64 73.4
BolC8t51205H Brassica oleracea HOM05D000509 ORTHO05D006393 1.4e-13 80.1 64 73.4
CARHR171710 Cardamine hirsuta HOM05D000509 ORTHO05D006393 2.3e-13 79.3 71 69.0
AL1G53560 Arabidopsis lyrata HOM05D000509 ORTHO05D006393 8.8e-13 77.4 126 77.8
AT3G61370 Arabidopsis thaliana HOM05D000509 ORTHO05D006393 1.1e-12 77.0 71 63.4
Aa31LG1G27330 Aethionema arabicum HOM05D000509 ORTHO05D006393 4.1e-10 68.6 71 64.8
THA.LOC104798540 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 2.6e-09 65.9 71 57.7
THA.LOC104820589 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 2.9e-08 62.4 70 55.7
Ciclev10022504m.g Citrus clementina HOM05D000509 ORTHO05D006393 3.2e-07 58.9 71 57.7
BcaC05g27864 Brassica carinata HOM05D000770 ORTHO05D000586 9.4e-07 57.4 51 64.7
Cpa.g.sc11.3 Carica papaya HOM05D000509 ORTHO05D006393 9.4e-07 57.4 71 57.7
BolC5t32602H Brassica oleracea HOM05D000770 ORTHO05D000586 1.6e-06 56.6 55 61.8
BcaC07g41071 Brassica carinata HOM05D000509 ORTHO05D032338 2.1e-06 56.2 43 72.1
C08p40730 Brassica napus HOM05D000075 ORTHO05D032338 2.1e-06 56.2 43 72.1
BolC8t51638H Brassica oleracea HOM05D000075 ORTHO05D032338 2.1e-06 56.2 43 72.1
Cfa003925 Carpinus fangiana HOM05D000509 ORTHO05D006393 4.7e-06 55.1 70 54.3
CiPaw.01G061300 Carya illinoinensis HOM05D000509 ORTHO05D006393 6.1e-06 54.7 70 55.7
Haze_15506 Corylus avellana HOM05D000509 ORTHO05D006393 6.1e-06 54.7 70 54.3
Prupe.2G170600 Prunus persica HOM05D000509 ORTHO05D006393 6.1e-06 54.7 68 52.9


User provided reference genes

Program Settings