Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g52213 Brassica carinata HOM05D006180 ORTHO05D008836 4.3e-30 134.0 69 100.0
BcaC03g14551 Brassica carinata HOM05D006180 ORTHO05D008836 4.1e-25 117.5 69 91.3
BolC8t48220H Brassica oleracea HOM05D006180 ORTHO05D008836 6.0e-24 113.6 68 89.7
BcaC03g18136 Brassica carinata HOM05D006180 ORTHO05D008836 1.7e-23 112.1 69 88.4
BcaC04g20321 Brassica carinata HOM05D006180 ORTHO05D008836 1.7e-23 112.1 69 88.4
BcaC05g28196 Brassica carinata HOM05D006180 ORTHO05D008836 2.3e-23 111.7 69 87.0
BolC8t47705H Brassica oleracea HOM05D006180 ORTHO05D008836 3.0e-23 111.3 69 88.4
BcaC06g34760 Brassica carinata HOM05D006180 ORTHO05D008836 3.9e-23 110.9 69 87.0
BcaC02g09943 Brassica carinata HOM05D006180 ORTHO05D008836 5.1e-23 110.5 65 90.8
BcaC05g27396 Brassica carinata HOM05D006180 ORTHO05D008836 6.6e-23 110.2 65 90.8
BcaC03g15708 Brassica carinata HOM05D006180 ORTHO05D008836 1.5e-22 109.0 65 90.8
BcaC06g35447 Brassica carinata HOM05D006180 ORTHO05D008836 1.5e-22 109.0 69 87.0
BcaC01g00505 Brassica carinata HOM05D006180 ORTHO05D008836 3.3e-22 107.8 65 89.2
BcaC01g00832 Brassica carinata HOM05D006180 ORTHO05D008836 3.3e-22 107.8 65 89.2
BcaC03g15170 Brassica carinata HOM05D006180 ORTHO05D008836 3.3e-22 107.8 65 89.2
BolC9t57499H Brassica oleracea HOM05D006180 ORTHO05D008836 7.3e-22 106.7 69 85.5
BolC9t54116H Brassica oleracea HOM05D006180 ORTHO05D008836 9.6e-22 106.3 68 85.3
BcaC03g17963 Brassica carinata HOM05D006180 ORTHO05D008836 4.7e-21 104.0 65 86.2
BcaC09g49323 Brassica carinata HOM05D006180 ORTHO05D008836 4.7e-21 104.0 69 82.6
BcaC01g02066 Brassica carinata HOM05D006180 ORTHO05D008836 8.1e-21 103.2 69 81.2
BcaC01g05412 Brassica carinata HOM05D006180 ORTHO05D008836 1.4e-20 102.4 65 86.2
BcaC09g51369 Brassica carinata HOM05D006180 ORTHO05D008836 1.4e-20 102.4 65 86.2
BcaC05g27335 Brassica carinata HOM05D006180 ORTHO05D008836 2.4e-20 101.7 65 84.6
BcaC02g09618 Brassica carinata HOM05D006180 ORTHO05D008836 3.1e-20 101.3 69 76.8
BolC4t23579H Brassica oleracea HOM05D006180 ORTHO05D008836 3.1e-20 101.3 69 81.2
BolC6t37026H Brassica oleracea HOM05D006180 ORTHO05D008836 3.1e-20 101.3 69 79.7
BcaC05g27953 Brassica carinata HOM05D006180 ORTHO05D008836 4.0e-20 100.9 65 84.6
BolC8t47047H Brassica oleracea HOM05D006180 ORTHO05D008836 4.0e-20 100.9 69 79.7
BcaC06g34325 Brassica carinata HOM05D006180 ORTHO05D008836 5.2e-20 100.5 65 86.2
BcaC09g49716 Brassica carinata HOM05D006180 ORTHO05D008836 5.2e-20 100.5 65 84.6
BcaC09g49718 Brassica carinata HOM05D006180 ORTHO05D008836 5.2e-20 100.5 65 84.6
BcaC01g02996 Brassica carinata HOM05D006180 ORTHO05D008836 1.2e-19 99.4 65 83.1
BcaC02g11249 Brassica carinata HOM05D006180 ORTHO05D008836 1.2e-19 99.4 65 83.1
BcaC02g09301 Brassica carinata HOM05D006180 ORTHO05D008836 5.8e-19 97.1 65 83.1
BcaC05g25634 Brassica carinata HOM05D006180 ORTHO05D011628 1.7e-18 95.5 64 79.7
BolC2t09839H Brassica oleracea HOM05D006180 ORTHO05D008836 1.7e-18 95.5 69 76.8
BolC4t24632H Brassica oleracea HOM05D006180 ORTHO05D008836 1.7e-18 95.5 54 92.6
BcaC04g20735 Brassica carinata HOM05D006180 ORTHO05D008836 2.2e-18 95.1 65 81.5
BcaC04g22517 Brassica carinata HOM05D006180 ORTHO05D008836 2.2e-18 95.1 65 78.5
BcaC02g11478 Brassica carinata HOM05D006180 ORTHO05D008836 3.8e-18 94.4 64 79.7
BcaC03g14526 Brassica carinata HOM05D006180 ORTHO05D008836 8.4e-18 93.2 65 80.0
BolC2t09130H Brassica oleracea HOM05D006180 ORTHO05D008836 1.1e-17 92.8 50 96.0
BcaC06g35269 Brassica carinata HOM05D006180 ORTHO05D008836 1.4e-17 92.4 65 75.4
BolC5t33618H Brassica oleracea HOM05D006180 ORTHO05D008836 1.4e-17 92.4 69 73.9
BcaC01g02220 Brassica carinata HOM05D006180 ORTHO05D008836 1.9e-17 92.0 65 76.9
BolC2t07858H Brassica oleracea HOM05D006180 ORTHO05D008836 2.4e-17 91.7 53 90.6
BolC5t32857H Brassica oleracea HOM05D006180 ORTHO05D008836 3.2e-17 91.3 76 71.1
BolC6t39110H Brassica oleracea HOM05D006180 ORTHO05D008836 3.2e-17 91.3 76 71.1
BcaC03g17920 Brassica carinata HOM05D006180 ORTHO05D008836 1.2e-16 89.4 65 76.9
BcaC04g18643 Brassica carinata HOM05D006180 ORTHO05D008836 6.0e-16 87.0 70 72.9
BcaC05g28158 Brassica carinata HOM05D006180 ORTHO05D008836 1.1e-14 82.8 69 63.8
BcaC02g09360 Brassica carinata HOM05D006180 ORTHO05D008836 2.5e-14 81.6 65 69.2
BcaC05g28517 Brassica carinata HOM05D006180 ORTHO05D008836 3.3e-14 81.3 60 73.3
BcaC05g27563 Brassica carinata HOM05D006180 ORTHO05D008836 4.3e-14 80.9 65 67.7
BcaC01g00014 Brassica carinata HOM05D006180 ORTHO05D008836 5.6e-14 80.5 66 74.2
BcaC01g02476 Brassica carinata HOM05D006180 ORTHO05D008836 1.3e-13 79.3 65 67.7
BcaC09g48829 Brassica carinata HOM05D006180 ORTHO05D008836 1.6e-13 79.0 58 74.1
BcaC04g21256 Brassica carinata HOM05D006180 ORTHO05D008836 2.1e-13 78.6 69 62.3
BcaC03g16175 Brassica carinata HOM05D006180 ORTHO05D008836 2.8e-13 78.2 65 66.2
BcaC04g21441 Brassica carinata HOM05D006180 ORTHO05D008836 2.8e-13 78.2 65 66.2
BcaC02g12833 Brassica carinata HOM05D006180 ORTHO05D008836 3.6e-13 77.8 66 66.7
BcaC03g16121 Brassica carinata HOM05D006180 ORTHO05D008836 3.6e-13 77.8 49 83.7
BcaC06g36092 Brassica carinata HOM05D006180 ORTHO05D008836 1.4e-12 75.9 58 69.0
BcaC03g14289 Brassica carinata HOM05D001196 ORTHO05D001673 1.8e-12 75.5 44 88.6
BcaC08g44300 Brassica carinata HOM05D006180 ORTHO05D008836 2.0e-11 72.0 65 63.1
BcaC03g17026 Brassica carinata HOM05D006180 ORTHO05D008836 4.5e-11 70.9 65 61.5
BcaC02g10249 Brassica carinata HOM05D003421 ORTHO05D039416 5.8e-11 70.5 64 62.5
BcaC03g13665 Brassica carinata HOM05D006180 ORTHO05D008836 5.8e-11 70.5 68 61.8
BcaC03g15400 Brassica carinata HOM05D006180 ORTHO05D008836 5.8e-11 70.5 68 61.8
BcaC09g49922 Brassica carinata HOM05D006180 ORTHO05D008836 5.8e-11 70.5 68 61.8
BolC2t09598H Brassica oleracea HOM05D006180 ORTHO05D008836 5.8e-11 70.5 68 61.8
BcaC08g44213 Brassica carinata HOM05D006180 ORTHO05D008836 7.6e-11 70.1 65 63.1
BcaB06g27924 Brassica carinata HOM05D006180 ORTHO05D008836 1.3e-10 69.3 58 67.2
BcaC03g15728 Brassica carinata HOM05D006180 ORTHO05D008836 1.3e-10 69.3 67 59.7
BcaB02g11247 Brassica carinata HOM05D006180 ORTHO05D018575 4.9e-10 67.4 58 65.5
BcaC04g21991 Brassica carinata HOM05D006180 ORTHO05D008836 8.4e-10 66.6 58 63.8
BcaNung02588 Brassica carinata HOM05D006180 ORTHO05D008836 8.4e-10 66.6 49 71.4
BcaB01g06357 Brassica carinata HOM05D006180 ORTHO05D008836 1.1e-09 66.2 57 66.7
BcaC04g19670 Brassica carinata HOM05D006180 ORTHO05D008836 1.1e-09 66.2 64 62.5
BcaB05g23751 Brassica carinata HOM05D006180 ORTHO05D008836 1.4e-09 65.9 67 55.2
BolC4t24699H Brassica oleracea HOM05D006180 ORTHO05D008836 2.4e-09 65.1 57 64.9
BcaB05g24218 Brassica carinata HOM05D006180 ORTHO05D008836 5.4e-09 63.9 54 68.5
BcaB02g11376 Brassica carinata HOM05D006180 ORTHO05D008836 1.2e-08 62.8 54 66.7
BcaB04g19655 Brassica carinata HOM05D006180 ORTHO05D008836 1.2e-08 62.8 40 80.0
BcaC02g10551 Brassica carinata HOM05D006180 ORTHO05D008836 1.2e-08 62.8 67 56.7
BcaC08g46969 Brassica carinata HOM05D006180 ORTHO05D008836 1.2e-08 62.8 40 80.0
BolC1t03761H Brassica oleracea HOM05D006180 ORTHO05D008836 2.1e-08 62.0 36 91.7
BraA05t21281Z Brassica rapa HOM05D006180 ORTHO05D008836 2.1e-08 62.0 68 52.9
BcaC04g22089 Brassica carinata HOM05D001829 ORTHO05D007093 2.7e-08 61.6 38 86.8
BcaB01g00431 Brassica carinata HOM05D006180 ORTHO05D008836 4.6e-08 60.8 58 60.3
BcaC05g29430 Brassica carinata HOM05D006180 ORTHO05D008836 4.6e-08 60.8 58 60.3
BraSC37t46161Z Brassica rapa HOM05D006180 ORTHO05D008836 7.9e-08 60.1 65 56.9
BcaC01g00566 Brassica carinata HOM05D002078 ORTHO05D094425 5.1e-07 57.4 67 59.7
BcaC01g01018 Brassica carinata HOM05D006180 ORTHO05D008836 6.7e-07 57.0 72 51.4
BcaNung01811 Brassica carinata HOM05D006180 ORTHO05D008836 8.7e-07 56.6 56 58.9
BcaB07g33028 Brassica carinata HOM05D006180 ORTHO05D008836 1.1e-06 56.2 47 68.1
BcaC01g01662 Brassica carinata HOM05D006180 ORTHO05D008836 1.5e-06 55.8 55 60.0
BcaC07g37826 Brassica carinata HOM05D006180 ORTHO05D008836 4.3e-06 54.3 62 56.5
BcaC07g37623 Brassica carinata HOM05D006180 ORTHO05D008836 9.6e-06 53.1 51 54.9


User provided reference genes

Program Settings