Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g52121 Brassica carinata HOM05D009632 ORTHO05D011780 4.0e-27 124.0 63 100.0
C01p05490 Brassica napus HOM05D009632 ORTHO05D011780 2.3e-22 108.2 60 91.7
BolC1t00529H Brassica oleracea HOM05D009632 ORTHO05D011780 2.3e-22 108.2 60 91.7
BcaC09g52120 Brassica carinata HOM05D009632 ORTHO05D011780 5.1e-22 107.1 60 90.0
C01p05480 Brassica napus HOM05D009632 ORTHO05D011780 5.1e-22 107.1 60 91.7
BolC1t00528H Brassica oleracea HOM05D009632 ORTHO05D011780 5.1e-22 107.1 60 91.7
A01p05040 Brassica napus HOM05D009632 ORTHO05D011780 8.7e-22 106.3 60 90.0
BraA01t00486Z Brassica rapa HOM05D009632 ORTHO05D011780 8.7e-22 106.3 60 90.0
A01p05030 Brassica napus HOM05D009632 ORTHO05D011780 1.5e-21 105.5 58 91.4
BraA01t00485Z Brassica rapa HOM05D009632 ORTHO05D011780 1.5e-21 105.5 58 91.4
C01p05520 Brassica napus HOM05D009632 ORTHO05D011780 2.5e-21 104.8 60 88.3
BolC1t00532H Brassica oleracea HOM05D009632 ORTHO05D011780 2.5e-21 104.8 60 88.3
A01p05050 Brassica napus HOM05D009632 ORTHO05D011780 2.8e-20 101.3 60 86.7
C01p05510 Brassica napus HOM05D009632 ORTHO05D011780 2.8e-20 101.3 60 86.7
BraA01t00487Z Brassica rapa HOM05D009632 ORTHO05D011780 2.8e-20 101.3 60 86.7
BcaC09g52119 Brassica carinata HOM05D009632 ORTHO05D011780 4.8e-20 100.5 61 88.5
A01p05060 Brassica napus HOM05D009632 ORTHO05D011780 8.2e-20 99.8 60 85.0
C01p05530 Brassica napus HOM05D009632 ORTHO05D011780 8.2e-20 99.8 60 86.7
BraA01t00488Z Brassica rapa HOM05D009632 ORTHO05D011780 8.2e-20 99.8 60 85.0
BolC1t00531H Brassica oleracea HOM05D009632 ORTHO05D011780 1.4e-19 99.0 60 85.0
BolC1t00533H Brassica oleracea HOM05D009632 ORTHO05D011780 6.9e-19 96.7 60 85.0
Sp7g30890 Schrenkiella parvula HOM05D009632 ORTHO05D011780 1.2e-18 95.9 60 83.3
Sp7g09720 Schrenkiella parvula HOM05D009632 ORTHO05D011780 1.0e-17 92.8 60 80.0
AT4G33145 Arabidopsis thaliana HOM05D009632 ORTHO05D011780 1.3e-12 75.9 63 65.1
BolC3t15042H Brassica oleracea HOM05D009632 ORTHO05D011780 8.2e-12 73.2 43 83.7
CARHR241170 Cardamine hirsuta HOM05D009632 ORTHO05D011780 1.8e-11 72.0 71 60.6
AL7G18420 Arabidopsis lyrata HOM05D009632 ORTHO05D011780 1.2e-10 69.3 65 64.6
C03p26550 Brassica napus HOM05D056085 ORTHO05D098111 6.7e-06 53.5 38 73.7


User provided reference genes

Program Settings