Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g52048 Brassica carinata HOM05D005141 ORTHO05D006250 9.2e-201 703.4 357 100.0
C01p06380 Brassica napus HOM05D005141 ORTHO05D006250 5.3e-148 528.1 355 81.4
BraA01t00550Z Brassica rapa HOM05D005141 ORTHO05D006250 4.5e-147 525.0 359 80.5
A01p05810 Brassica napus HOM05D005141 ORTHO05D006250 1.3e-143 513.5 361 80.1
BolC1t00634H Brassica oleracea HOM05D005141 ORTHO05D006250 4.9e-138 495.0 355 78.0
Sp7g30350 Schrenkiella parvula HOM05D005141 ORTHO05D006250 6.5e-138 494.6 369 75.9
Thhalv10025562m.g Eutrema salsugineum HOM05D005141 ORTHO05D006250 2.3e-135 486.1 366 74.6
BraA08t33764Z Brassica rapa HOM05D005141 ORTHO05D006250 1.3e-127 460.3 366 71.9
C03p87260 Brassica napus HOM05D005141 ORTHO05D006250 1.8e-127 459.9 366 71.6
BolC3t21027H Brassica oleracea HOM05D005141 ORTHO05D006250 5.1e-127 458.4 366 71.3
BcaC01g01013 Brassica carinata HOM05D005141 ORTHO05D006250 6.7e-127 458.0 365 71.2
Carub.0007s0798 Capsella rubella HOM05D005141 ORTHO05D006250 8.2e-125 451.1 367 70.8
BcaB03g12752 Brassica carinata HOM05D005141 ORTHO05D006250 5.3e-124 448.4 368 70.1
A08p18120 Brassica napus HOM05D005141 ORTHO05D006250 9.1e-124 447.6 363 71.1
AT4G32570 Arabidopsis thaliana HOM05D005141 ORTHO05D006250 5.0e-122 441.8 367 68.9
AL7G19190 Arabidopsis lyrata HOM05D005141 ORTHO05D006250 3.0e-119 432.6 337 72.7
Aa31LG4G11720 Aethionema arabicum HOM05D005141 ORTHO05D006250 4.0e-87 325.9 365 53.7
THA.LOC104803820 Tarenaya hassleriana HOM05D005141 ORTHO05D006250 2.9e-69 266.5 367 50.1
MD08G1137500 Malus domestica HOM05D005141 ORTHO05D006250 7.1e-44 182.2 423 36.2
Potri.018G033700 Populus trichocarpa HOM05D005141 ORTHO05D006250 4.6e-43 179.5 413 35.8
Phvul.009G097300 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 1.7e-42 177.6 405 35.3
Prupe.1G467500 Prunus persica HOM05D005141 ORTHO05D006250 6.6e-42 175.6 415 36.9
RcHm_v2.0_Chr6g0312851 Rosa chinensis HOM05D005141 ORTHO05D006250 2.5e-41 173.7 428 36.7
VMungo1309G3073 Vigna mungo HOM05D005141 ORTHO05D006250 7.3e-41 172.2 422 34.6
MD15G1116100 Malus domestica HOM05D005141 ORTHO05D006250 9.6e-41 171.8 420 36.0
Cfa021484 Carpinus fangiana HOM05D005141 ORTHO05D006250 2.1e-40 170.6 417 36.5
Sabra06G0193700 Salix brachista HOM05D005141 ORTHO05D006250 2.4e-39 167.2 418 35.6
Duzib187G0541 Durio zibethinus HOM05D005141 ORTHO05D006250 5.3e-39 166.0 407 36.1
Glyma.04G071400 Glycine max HOM05D005141 ORTHO05D006250 6.9e-39 165.6 432 35.2
Haze_21614 Corylus avellana HOM05D005141 ORTHO05D006250 9.0e-39 165.2 371 36.9
Sabra18G0034600 Salix brachista HOM05D005141 ORTHO05D006250 9.0e-39 165.2 408 34.3
TWI32G0021 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 2.0e-38 164.1 346 38.2
Thecc.09G145300 Theobroma cacao HOM05D005141 ORTHO05D006250 3.4e-38 163.3 417 36.0
CiPaw.07G218200 Carya illinoinensis HOM05D005141 ORTHO05D006250 4.5e-38 162.9 434 35.5
CiPaw.08G014900 Carya illinoinensis HOM05D005141 ORTHO05D006250 5.8e-38 162.5 433 34.2
Glyma.06G072700 Glycine max HOM05D005141 ORTHO05D006250 9.9e-38 161.8 406 34.5
Gohir.A05G010100 Gossypium hirsutum HOM05D005141 ORTHO05D006250 9.9e-38 161.8 363 36.9
FAN27G2430 Fragaria x ananassa HOM05D005141 ORTHO05D006250 1.3e-37 161.4 421 34.9
Ciclev10008356m.g Citrus clementina HOM05D005141 ORTHO05D006250 1.7e-37 161.0 422 34.4
QL12p031441 Quercus lobata HOM05D005141 ORTHO05D006250 1.7e-37 161.0 412 35.9
FAN15G0409 Fragaria x ananassa HOM05D005141 ORTHO05D006250 2.2e-37 160.6 419 34.4
Gohir.D05G010800 Gossypium hirsutum HOM05D005141 ORTHO05D006250 2.2e-37 160.6 363 36.9
Gorai.009G011200 Gossypium raimondii HOM05D005141 ORTHO05D006250 2.9e-37 160.2 399 36.1
Duzib168G0094 Durio zibethinus HOM05D005141 ORTHO05D006250 6.4e-37 159.1 430 34.9
Lj1g0018494 Lotus japonicus HOM05D005141 ORTHO05D006250 8.4e-37 158.7 411 35.8
FAN24G3348 Fragaria x ananassa HOM05D005141 ORTHO05D006250 1.1e-36 158.3 413 35.1
Dinv30204 Davidia involucrata HOM05D005141 ORTHO05D006250 1.9e-36 157.5 424 34.7
BcaC08g44885 Brassica carinata HOM05D005141 ORTHO05D006250 2.4e-36 157.1 155 60.0
Manes.03G065500 Manihot esculenta HOM05D005141 ORTHO05D006250 4.2e-36 156.4 333 37.8
FAN20G1096 Fragaria x ananassa HOM05D005141 ORTHO05D006250 5.4e-36 156.0 420 35.2
Medtr3g107950 Medicago truncatula HOM05D005141 ORTHO05D006250 7.1e-36 155.6 405 34.1
TPR.G34685 Trifolium pratense HOM05D005141 ORTHO05D006250 9.3e-36 155.2 414 33.8
Lsat_1_v5_gn_1_43100 Lactuca sativa HOM05D005141 ORTHO05D006250 2.1e-35 154.1 319 38.6
Atru.chr7.2334 Acer truncatum HOM05D005141 ORTHO05D006250 2.7e-35 153.7 411 33.3
C06p25010 Brassica napus HOM05D000698 ORTHO05D006250 2.7e-35 153.7 119 71.4
Ca_15703_v3 Cicer arietinum L. HOM05D005141 ORTHO05D006250 2.7e-35 153.7 407 34.4
A06p26660 Brassica napus HOM05D005141 ORTHO05D006250 1.0e-34 151.8 119 72.3
CANSAT25G3062 Cannabis sativa HOM05D005141 ORTHO05D006250 1.3e-34 151.4 409 35.2
TWI34G0135 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 1.8e-34 151.0 348 36.8
GSVIVG01035797001 Vitis vinifera HOM05D005141 ORTHO05D006250 3.0e-34 150.2 417 34.5
Hma1.2p1_0175F.1_g077130 Hydrangea macrophylla HOM05D005141 ORTHO05D006250 7.4e-33 145.6 397 32.5
Lalb_Chr08g0243831 Lupinus albus HOM05D005141 ORTHO05D006250 9.6e-33 145.2 400 32.5
Lalb_Chr23g0268881 Lupinus albus HOM05D005141 ORTHO05D006250 2.1e-32 144.1 418 32.5
PSO063G0687 Papaver somniferum HOM05D005141 ORTHO05D006250 2.1e-32 144.1 345 35.7
Eucgr.C01809 Eucalyptus grandis HOM05D005141 ORTHO05D006250 2.8e-32 143.7 341 37.0
Manes.16G067800 Manihot esculenta HOM05D005141 ORTHO05D006250 3.7e-32 143.3 326 36.8
Sed0008448 Sechium edule HOM05D005141 ORTHO05D006250 8.1e-32 142.1 405 32.6
Sopen06g024010 Solanum pennellii HOM05D005141 ORTHO05D006250 1.8e-31 141.0 332 36.1
Duzib150G1154 Durio zibethinus HOM05D005141 ORTHO05D006250 3.1e-31 140.2 469 33.0
Solyc06g065650.3 Solanum lycopersicum HOM05D005141 ORTHO05D006250 3.1e-31 140.2 332 36.7
ECA233G0036 Erigeron canadensis HOM05D005141 ORTHO05D006250 6.9e-31 139.0 395 33.7
Nn2g11855 Nelumbo nucifera HOM05D005141 ORTHO05D006250 9.0e-31 138.7 396 31.8
CAN.G199.28 Capsicum annuum HOM05D005141 ORTHO05D006250 1.2e-30 138.3 333 36.0
TAR626G1320 Trochodendron aralioides HOM05D005141 ORTHO05D006250 1.2e-30 138.3 428 31.8
arahy.Tifrunner.gnm1.ann1.WUI646 Arachis hypogaea HOM05D005141 ORTHO05D006250 2.6e-30 137.1 327 34.9
MELO3C003675.2 Cucumis melo HOM05D005141 ORTHO05D006250 2.6e-30 137.1 324 35.2
CsaV3_3G046630 Cucumis sativus L. HOM05D005141 ORTHO05D006250 4.5e-30 136.3 316 34.8
TAR636G0300 Trochodendron aralioides HOM05D005141 ORTHO05D006250 5.8e-30 136.0 399 33.6
ClCG08G012940 Citrullus lanatus HOM05D005141 ORTHO05D006250 7.6e-30 135.6 408 32.4
ClCG05G017130 Citrullus lanatus HOM05D005141 ORTHO05D006250 9.9e-30 135.2 413 32.0
PGSC0003DMG400026089 Solanum tuberosum HOM05D005141 ORTHO05D006250 1.7e-29 134.4 332 35.5
Potri.006G247500 Populus trichocarpa HOM05D005141 ORTHO05D006250 4.9e-29 132.9 305 35.7
Cc08_g08010 Coffea canephora HOM05D005141 ORTHO05D006250 6.4e-29 132.5 410 32.4
DCAR_022871 Daucus carota HOM05D005141 ORTHO05D006250 6.4e-29 132.5 410 33.7
TAR383G0458 Trochodendron aralioides HOM05D005141 ORTHO05D006250 8.4e-29 132.1 417 34.3
COL.COLO4_24046 Corchorus olitorius HOM05D005141 ORTHO05D006250 1.4e-28 131.3 243 42.4
Nitab4.5_0005873g0030 Nicotiana tabacum HOM05D005141 ORTHO05D006250 1.9e-28 131.0 321 35.2
PSO782G1260 Papaver somniferum HOM05D005141 ORTHO05D006250 2.4e-28 130.6 382 31.9
Lj7A714G44 Lonicera japonica HOM05D005141 ORTHO05D006250 4.2e-28 129.8 339 34.2
Nitab4.5_0011669g0010 Nicotiana tabacum HOM05D005141 ORTHO05D006250 5.5e-28 129.4 330 33.6
Actinidia13429 Actinidia chinensis HOM05D005141 ORTHO05D006250 1.2e-27 128.3 324 33.0
HanXRQChr02g0050641 Helianthus annuus HOM05D005141 ORTHO05D006250 1.6e-27 127.9 345 33.6
Sed0000645 Sechium edule HOM05D005141 ORTHO05D006250 3.5e-27 126.7 447 30.9
PGR031G2456 Punica granatum HOM05D005141 ORTHO05D006250 7.9e-27 125.6 349 33.8
Cpa.g.sc91.20 Carica papaya HOM05D005141 ORTHO05D006250 1.0e-26 125.2 320 33.8
vmacro11124 Vaccinium macrocarpon HOM05D005141 ORTHO05D006250 1.0e-26 125.2 443 30.9
CARHR240540 Cardamine hirsuta HOM05D005141 ORTHO05D006250 2.3e-26 124.0 79 81.0
HanXRQChr13g0402161 Helianthus annuus HOM05D005141 ORTHO05D006250 5.1e-26 122.9 257 37.4
Migut.A00282 Erythranthe guttata HOM05D005141 ORTHO05D006250 1.9e-25 120.9 349 34.1
SalBow4G0713 Salvia bowleyana HOM05D005141 ORTHO05D006250 2.5e-25 120.6 380 32.1
arahy.Tifrunner.gnm1.ann1.29TRSQ Arachis hypogaea HOM05D005141 ORTHO05D006250 3.3e-25 120.2 365 31.5
Phvul.001G055100 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 9.6e-25 118.6 325 32.9
MSTRG.25868 Avicennia marina HOM05D005141 ORTHO05D006250 3.7e-24 116.7 317 35.0
Oeu032487.3 Olea europaea HOM05D005141 ORTHO05D006250 4.8e-24 116.3 260 35.0
FvH4_2g30050 Fragaria vesca HOM05D005141 ORTHO05D006250 8.2e-24 115.5 306 33.7
EL10Ac2g02550 Beta vulgaris HOM05D005141 ORTHO05D006250 1.8e-23 114.4 269 34.6
MBI04_g39529_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 4.0e-23 113.2 345 32.2
Lsat_1_v5_gn_6_22941 Lactuca sativa HOM05D005141 ORTHO05D006250 9.0e-23 112.1 332 32.8
Dinv11587 Davidia involucrata HOM05D005141 ORTHO05D006250 1.2e-22 111.7 216 38.9
unitig_37.g12225 Utricularia gibba HOM05D005141 ORTHO05D006250 2.0e-22 110.9 301 33.6
CsaV3_2G031660 Cucumis sativus L. HOM05D005141 ORTHO05D006250 5.8e-22 109.4 217 40.6
Peaxi162Scf00545g00034 Petunia axillaris HOM05D005141 ORTHO05D006250 1.7e-21 107.8 456 29.6
AUR62024850 Chenopodium quinoa HOM05D005141 ORTHO05D006250 4.9e-21 106.3 254 35.4
Oeu014659.3 Olea europaea HOM05D005141 ORTHO05D006250 1.4e-20 104.8 335 32.2
Rhsim02G0188600 Rhododendron simsii HOM05D005141 ORTHO05D006250 1.4e-20 104.8 317 31.5
Actinidia13280 Actinidia chinensis HOM05D005141 ORTHO05D006250 7.1e-20 102.4 173 40.5
Nn8g39307 Nelumbo nucifera HOM05D005141 ORTHO05D006250 7.1e-20 102.4 329 29.5
unitig_46.g18533 Utricularia gibba HOM05D005141 ORTHO05D006250 2.1e-19 100.9 255 36.1
C07p35200 Brassica napus HOM05D005141 ORTHO05D006250 6.0e-19 99.4 91 65.9
BolC7t44052H Brassica oleracea HOM05D005141 ORTHO05D006250 6.0e-19 99.4 91 65.9
SHI18604 Sapria himalayana HOM05D005141 ORTHO05D006250 1.0e-18 98.6 102 51.0
MELO3C011217.2 Cucumis melo HOM05D005141 ORTHO05D006250 3.0e-18 97.1 295 34.9
SGA_v2.0_scaffold27G11478 Striga asiatica HOM05D005141 ORTHO05D006250 6.7e-18 95.9 337 31.2
Psat0s1782g0240 Pisum sativum HOM05D005141 ORTHO05D006250 1.1e-17 95.1 251 31.5
MBI01_g37337_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 1.9e-17 94.4 321 30.8
CARHR240550 Cardamine hirsuta HOM05D005141 ORTHO05D006250 9.7e-17 92.0 50 86.0
HPP92_009098 Vanilla planifolia HOM05D005141 ORTHO05D006250 2.2e-16 90.9 121 45.5
ATR0083G007 Amborella trichopoda HOM05D005141 ORTHO05D006250 2.0e-14 84.3 143 39.9
AagrBONN_evm.TU.Sc2ySwM_117.408 Anthoceros agrestis HOM05D005141 ORTHO05D006250 1.3e-13 81.6 120 42.5
Pp3c19_8700 Physcomitrium patens HOM05D005141 ORTHO05D006250 5.0e-13 79.7 130 40.0
SEGI_18535 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 1.4e-12 78.2 118 40.7
Aqoxy81s001 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 3.2e-12 77.0 112 47.3
Pp3c22_12420 Physcomitrium patens HOM05D005141 ORTHO05D006250 3.6e-11 73.6 60 58.3
SMO143G0273 Selaginella moellendorffii HOM05D005141 ORTHO05D006250 2.3e-10 70.9 113 38.9
Mapoly0079s0053 Marchantia polymorpha HOM05D005141 ORTHO05D006250 3.0e-10 70.5 119 38.7
CSS0000568 Camellia sinensis var. sinensis HOM05D005141 ORTHO05D006250 6.7e-10 69.3 41 78.0
BolC9t58511H Brassica oleracea HOM05D005141 ORTHO05D006250 1.5e-09 68.2 56 67.9
Glyma.17G205200 Glycine max HOM05D005141 ORTHO05D006250 1.7e-08 64.7 125 37.6
Haze_10527 Corylus avellana HOM05D005141 ORTHO05D006250 1.8e-07 61.2 67 46.3


User provided reference genes

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