Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g51755 Brassica carinata HOM05D000953 ORTHO05D000231 6.8e-92 340.9 202 100.0
C01p09420 Brassica napus HOM05D000953 ORTHO05D000231 8.3e-74 280.8 205 75.1
BolC1t00930H Brassica oleracea HOM05D000953 ORTHO05D000231 8.3e-74 280.8 205 75.1
A01p08380 Brassica napus HOM05D000953 ORTHO05D000231 1.8e-68 263.1 204 75.5
BraA01t00786Z Brassica rapa HOM05D000953 ORTHO05D000231 1.8e-68 263.1 204 75.5
CARHR237680 Cardamine hirsuta HOM05D000953 ORTHO05D000231 2.6e-59 232.6 214 61.7
Sp7g27590 Schrenkiella parvula HOM05D000953 ORTHO05D000231 6.4e-58 228.0 198 76.3
AL7G22470 Arabidopsis lyrata HOM05D000953 ORTHO05D000231 4.0e-52 208.8 206 60.2
AT4G29780 Arabidopsis thaliana HOM05D000953 ORTHO05D000231 2.4e-49 199.5 208 68.8
Aa31LG2G20760 Aethionema arabicum HOM05D000953 ORTHO05D000231 1.3e-39 167.2 191 57.6
BcaNung00493 Brassica carinata HOM05D000953 ORTHO05D000231 1.4e-36 157.1 201 51.2
A03p59180 Brassica napus HOM05D000953 ORTHO05D000231 1.3e-34 150.6 203 45.8
C07p57240 Brassica napus HOM05D000953 ORTHO05D000231 2.4e-33 146.4 203 49.3
BolC7t46194H Brassica oleracea HOM05D000953 ORTHO05D000231 2.4e-33 146.4 203 49.3
THA.LOC104814633 Tarenaya hassleriana HOM05D000953 ORTHO05D000231 4.2e-33 145.6 201 45.3
BraA03t14977Z Brassica rapa HOM05D000953 ORTHO05D000231 1.0e-31 141.0 203 43.8
THA.LOC104803964 Tarenaya hassleriana HOM05D000953 ORTHO05D000231 1.1e-30 137.5 203 44.3
Cpa.g.sc28.125 Carica papaya HOM05D000953 ORTHO05D000231 6.0e-24 115.2 201 49.3
Atru.chr7.1638 Acer truncatum HOM05D000953 ORTHO05D000231 2.5e-22 109.8 208 38.0
Haze_25945 Corylus avellana HOM05D000953 ORTHO05D000231 6.2e-21 105.1 192 36.5
Duzib168G1990 Durio zibethinus HOM05D000953 ORTHO05D000231 3.1e-20 102.8 195 37.9
TWI63G0330 Tripterygium wilfordii HOM05D000953 ORTHO05D000231 1.2e-19 100.9 210 38.6
TWI32G0872 Tripterygium wilfordii HOM05D000953 ORTHO05D000231 1.5e-19 100.5 207 35.7
Dinv36790 Davidia involucrata HOM05D000953 ORTHO05D000231 9.3e-17 91.3 201 42.3
COL.COLO4_18162 Corchorus olitorius HOM05D000953 ORTHO05D000231 7.9e-16 88.2 162 36.4
EL10Ac4g09480 Beta vulgaris HOM05D000953 ORTHO05D000231 1.0e-15 87.8 120 44.2
Ah.04g163080 Amaranthus hybridus HOM05D000953 ORTHO05D000231 2.3e-15 86.7 118 42.4
Sabra05G0187600 Salix brachista HOM05D000953 ORTHO05D000231 5.1e-15 85.5 200 35.5
Duzib106G0235 Durio zibethinus HOM05D000953 ORTHO05D000231 6.7e-15 85.1 119 42.9
COL.COLO4_25809 Corchorus olitorius HOM05D000953 ORTHO05D000231 8.7e-15 84.7 129 38.8
Duzib150G0861 Durio zibethinus HOM05D000953 ORTHO05D000231 1.9e-14 83.6 203 35.0
QL02p061895 Quercus lobata HOM05D000953 ORTHO05D000231 3.3e-14 82.8 198 46.0
TAR636G3357 Trochodendron aralioides HOM05D000953 ORTHO05D000231 3.3e-14 82.8 124 39.5
Prupe.7G205200 Prunus persica HOM05D000953 ORTHO05D000231 5.7e-14 82.0 200 46.0
Nn8g38770 Nelumbo nucifera HOM05D000953 ORTHO05D000231 1.3e-13 80.9 209 31.1
AUR62000404 Chenopodium quinoa HOM05D000953 ORTHO05D000231 6.2e-13 78.6 119 39.5
Hma1.2p1_0169F.1_g074810 Hydrangea macrophylla HOM05D000953 ORTHO05D000231 6.2e-13 78.6 200 37.0
AUR62006761 Chenopodium quinoa HOM05D000953 ORTHO05D000231 2.4e-12 76.6 119 38.7
ECA240G3951 Erigeron canadensis HOM05D000953 ORTHO05D000231 2.4e-12 76.6 133 33.8
AUR62000410 Chenopodium quinoa HOM05D000953 ORTHO05D000231 4.1e-12 75.9 119 38.7
Haze_18148 Corylus avellana HOM05D000953 ORTHO05D000231 4.1e-12 75.9 124 35.5
Dinv42345 Davidia involucrata HOM05D000953 ORTHO05D000231 6.9e-12 75.1 200 32.0
AUR62000415 Chenopodium quinoa HOM05D000953 ORTHO05D000231 1.5e-11 73.9 119 38.7
Sed0006644 Sechium edule HOM05D000953 ORTHO05D000231 1.5e-11 73.9 117 36.8
Nn6g35547 Nelumbo nucifera HOM05D000953 ORTHO05D000231 2.6e-11 73.2 111 40.5
Duzib187G0887 Durio zibethinus HOM05D000953 ORTHO05D000231 3.4e-11 72.8 197 29.4
Duzib168G2279 Durio zibethinus HOM05D000953 ORTHO05D000231 7.6e-11 71.6 111 36.9
MD15G1211600 Malus domestica HOM05D000953 ORTHO05D000231 7.6e-11 71.6 129 34.1
Ca_13099_v3 Cicer arietinum L. HOM05D000953 ORTHO05D000231 1.0e-10 71.2 130 37.7
COL.COLO4_21098 Corchorus olitorius HOM05D000953 ORTHO05D000231 1.0e-10 71.2 111 38.7
Sabra06G0174100 Salix brachista HOM05D000953 ORTHO05D000231 1.0e-10 71.2 107 36.4
CANSAT56G3639 Cannabis sativa HOM05D000953 ORTHO05D000231 3.8e-10 69.3 206 29.6
Hma1.2p1_0196F.1_g084870 Hydrangea macrophylla HOM05D000953 ORTHO05D000231 3.8e-10 69.3 128 32.0
Sabra18G0052400 Salix brachista HOM05D000953 ORTHO05D000231 6.5e-10 68.6 119 35.3
TPR.G38922 Trifolium pratense HOM05D000953 ORTHO05D000231 6.5e-10 68.6 127 36.2
PGR031G1214 Punica granatum HOM05D000953 ORTHO05D000231 1.9e-09 67.0 128 32.0
Lalb_Chr23g0267881 Lupinus albus HOM05D000953 ORTHO05D000231 2.5e-09 66.6 126 33.3
Dinv12445 Davidia involucrata HOM05D000953 ORTHO05D000231 4.2e-09 65.9 126 31.0
HanXRQChr09g0248321 Helianthus annuus HOM05D000953 ORTHO05D000231 4.2e-09 65.9 126 28.6
QL02p000638 Quercus lobata HOM05D000953 ORTHO05D000231 4.2e-09 65.9 128 35.9
Sc23g0005770 Simmondsia chinensis HOM05D000953 ORTHO05D000231 4.2e-09 65.9 124 36.3
THA.LOC104824632 Tarenaya hassleriana HOM05D000953 ORTHO05D000231 4.2e-09 65.9 128 35.2
PSO210G6780 Papaver somniferum HOM05D000953 ORTHO05D000231 5.5e-09 65.5 99 38.4
ClCG05G018050 Citrullus lanatus HOM05D000953 ORTHO05D000231 7.1e-09 65.1 118 31.4
VMungo1309G2253 Vigna mungo HOM05D000953 ORTHO05D000231 7.1e-09 65.1 187 41.2
Sopen08g018220 Solanum pennellii HOM05D000953 ORTHO05D000231 9.3e-09 64.7 108 35.2
Oeu052508.1 Olea europaea HOM05D000953 ORTHO05D000231 1.2e-08 64.3 138 29.0
SEGI_06262 Sequoiadendron giganteum HOM05D000953 ORTHO05D000231 1.2e-08 64.3 117 33.3
Lj5g0005120 Lotus japonicus HOM05D000953 ORTHO05D000231 1.6e-08 63.9 130 33.1
MBI05_g12567_MAGBIO Magnolia biondii HOM05D000953 ORTHO05D000231 1.6e-08 63.9 114 36.0
Aqoxy7G01147 Aquilegia oxysepala HOM05D000953 ORTHO05D000231 2.1e-08 63.5 130 33.1
VMungo0647G1840 Vigna mungo HOM05D000953 ORTHO05D000231 2.1e-08 63.5 109 35.8
PGR142G3377 Punica granatum HOM05D000953 ORTHO05D000231 3.5e-08 62.8 200 28.0
TPR.G35978 Trifolium pratense HOM05D000953 ORTHO05D000231 3.5e-08 62.8 114 31.6
Duzib150G0905 Durio zibethinus HOM05D000953 ORTHO05D000231 6.1e-08 62.0 117 33.3
AT5G12010 Arabidopsis thaliana HOM05D000953 ORTHO05D000231 7.9e-08 61.6 127 29.9
C03p06170 Brassica napus HOM05D000953 ORTHO05D000231 7.9e-08 61.6 126 29.4
BolC3t13124H Brassica oleracea HOM05D000953 ORTHO05D000231 7.9e-08 61.6 126 29.4
Duzib187G0745 Durio zibethinus HOM05D000953 ORTHO05D000231 7.9e-08 61.6 117 33.3
PSO210G0994 Papaver somniferum HOM05D000953 ORTHO05D000231 7.9e-08 61.6 99 37.4
Peaxi162Scf00070g10021 Petunia axillaris HOM05D000953 ORTHO05D000231 1.0e-07 61.2 109 33.9
BcaB01g05435 Brassica carinata HOM05D000953 ORTHO05D000231 2.3e-07 60.1 128 32.8
arahy.Tifrunner.gnm1.ann1.URH2DX Arachis hypogaea HOM05D000953 ORTHO05D000231 3.0e-07 59.7 128 30.5
Lalb_Chr22g0349631 Lupinus albus HOM05D000953 ORTHO05D000231 3.9e-07 59.3 122 33.6
arahy.Tifrunner.gnm1.ann1.RU0HW5 Arachis hypogaea HOM05D000953 ORTHO05D000231 6.7e-07 58.5 131 29.8
BraA03t13028Z Brassica rapa HOM05D000953 ORTHO05D000231 6.7e-07 58.5 128 31.2
CSS0014843 Camellia sinensis var. sinensis HOM05D000953 ORTHO05D000231 6.7e-07 58.5 126 30.2
CsaV3_4G035840 Cucumis sativus L. HOM05D000953 ORTHO05D000231 6.7e-07 58.5 122 31.1
Psat6g023720 Pisum sativum HOM05D000953 ORTHO05D000231 8.7e-07 58.2 126 30.2
RcHm_v2.0_Chr6g0311321 Rosa chinensis HOM05D000953 ORTHO05D000231 8.7e-07 58.2 124 30.6
MSTRG.1697 Avicennia marina HOM05D000953 ORTHO05D000231 1.5e-06 57.4 132 31.1
MELO3C032348.2 Cucumis melo HOM05D000953 ORTHO05D000231 1.5e-06 57.4 121 31.4
A03p38810 Brassica napus HOM05D000953 ORTHO05D000231 1.9e-06 57.0 126 27.8
Lalb_Chr11g0063211 Lupinus albus HOM05D000953 ORTHO05D000231 1.9e-06 57.0 122 33.6
FvH4_1g07981 Fragaria vesca HOM05D000953 ORTHO05D000231 2.5e-06 56.6 207 30.9
Lj7P256T34 Lonicera japonica HOM05D000953 ORTHO05D000231 2.5e-06 56.6 127 29.1
HPP92_009125 Vanilla planifolia HOM05D000953 ORTHO05D000231 3.3e-06 56.2 107 36.4
RcHm_v2.0_Chr2g0094021 Rosa chinensis HOM05D000953 ORTHO05D000231 4.3e-06 55.8 112 30.4


User provided reference genes

Program Settings