Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g51740 Brassica carinata HOM05D004932 ORTHO05D005622 3.0e-160 568.5 307 100.0
A01p08520 Brassica napus HOM05D004932 ORTHO05D005622 5.7e-151 537.7 309 93.2
C01p09950 Brassica napus HOM05D004932 ORTHO05D005622 5.7e-151 537.7 310 93.9
BolC1t00957H Brassica oleracea HOM05D004932 ORTHO05D005622 5.7e-151 537.7 310 93.9
BraA01t00801Z Brassica rapa HOM05D004932 ORTHO05D005622 3.6e-145 518.5 315 88.9
Thhalv10025804m.g Eutrema salsugineum HOM05D004932 ORTHO05D005622 6.1e-137 491.1 310 85.8
BcaC01g01175 Brassica carinata HOM05D004932 ORTHO05D005622 7.5e-135 484.2 312 85.9
Sp7g27380 Schrenkiella parvula HOM05D004932 ORTHO05D005622 8.3e-134 480.7 311 88.4
A08p19620 Brassica napus HOM05D004932 ORTHO05D005622 1.1e-133 480.3 312 86.2
BraA08t33920Z Brassica rapa HOM05D004932 ORTHO05D005622 5.4e-133 478.0 312 85.9
BolC3t21234H Brassica oleracea HOM05D004932 ORTHO05D005622 2.7e-132 475.7 312 85.6
AT4G29520 Arabidopsis thaliana HOM05D004932 ORTHO05D005622 3.5e-132 475.3 310 87.1
C03p89240 Brassica napus HOM05D004932 ORTHO05D005622 3.0e-131 472.2 312 84.9
AL7G22880 Arabidopsis lyrata HOM05D004932 ORTHO05D005622 1.5e-130 469.9 311 87.5
Carub.0007s1103 Capsella rubella HOM05D004932 ORTHO05D005622 6.2e-129 464.5 311 84.9
BcaB03g12610 Brassica carinata HOM05D004932 ORTHO05D005622 2.4e-125 452.6 311 82.6
CARHR237350 Cardamine hirsuta HOM05D004932 ORTHO05D005622 9.2e-125 450.7 309 83.2
THA.LOC104814605 Tarenaya hassleriana HOM05D004932 ORTHO05D005622 7.3e-114 414.5 305 75.7
Aa31LG2G20960 Aethionema arabicum HOM05D004932 ORTHO05D005622 2.1e-108 396.4 310 73.5
CANSAT56G0365 Cannabis sativa HOM05D004932 ORTHO05D005622 6.2e-97 358.2 308 65.6
SalBow1G2721 Salvia bowleyana HOM05D004932 ORTHO05D005622 2.2e-94 349.7 308 61.0
Gohir.D07G010400 Gossypium hirsutum HOM05D004932 ORTHO05D005622 2.9e-94 349.4 307 64.8
Gorai.001G010800 Gossypium raimondii HOM05D004932 ORTHO05D005622 2.9e-94 349.4 307 64.8
Duzib168G1170 Durio zibethinus HOM05D004932 ORTHO05D005622 4.9e-94 348.6 300 65.7
Gohir.A07G010100 Gossypium hirsutum HOM05D004932 ORTHO05D005622 4.9e-94 348.6 307 65.1
Eucgr.C00917 Eucalyptus grandis HOM05D004932 ORTHO05D005622 2.4e-93 346.3 299 63.9
PGR142G3354 Punica granatum HOM05D004932 ORTHO05D005622 1.2e-92 344.0 306 63.1
Solyc07g032250.4 Solanum lycopersicum HOM05D004932 ORTHO05D005622 1.6e-92 343.6 305 63.6
MD15G1203900 Malus domestica HOM05D004932 ORTHO05D005622 4.6e-92 342.0 310 63.5
Sopen07g015910 Solanum pennellii HOM05D004932 ORTHO05D005622 6.0e-92 341.7 305 63.6
PGSC0003DMG400008434 Solanum tuberosum HOM05D004932 ORTHO05D005622 7.9e-92 341.3 304 63.2
Lalb_Chr24g0393881 Lupinus albus HOM05D004932 ORTHO05D005622 1.0e-91 340.9 308 62.3
Lj2g0005770 Lotus japonicus HOM05D004932 ORTHO05D005622 3.0e-91 339.3 306 63.1
Duzib150G0148 Durio zibethinus HOM05D004932 ORTHO05D005622 3.9e-91 339.0 301 62.8
FAN26G1352 Fragaria x ananassa HOM05D004932 ORTHO05D005622 8.7e-91 337.8 298 63.8
FAN26G3436 Fragaria x ananassa HOM05D004932 ORTHO05D005622 8.7e-91 337.8 298 63.8
Manes.16G104000 Manihot esculenta HOM05D004932 ORTHO05D005622 2.5e-90 336.3 307 62.2
FAN19G2121 Fragaria x ananassa HOM05D004932 ORTHO05D005622 4.3e-90 335.5 298 63.8
Manes.14G155500 Manihot esculenta HOM05D004932 ORTHO05D005622 4.3e-90 335.5 307 60.9
FAN28G1050 Fragaria x ananassa HOM05D004932 ORTHO05D005622 5.6e-90 335.1 298 63.8
FvH4_1g07000 Fragaria vesca HOM05D004932 ORTHO05D005622 9.6e-90 334.3 306 60.5
FAN23G2709 Fragaria x ananassa HOM05D004932 ORTHO05D005622 1.3e-89 334.0 298 63.4
TWI63G1476 Tripterygium wilfordii HOM05D004932 ORTHO05D005622 1.3e-89 334.0 305 61.0
MSTRG.10579 Avicennia marina HOM05D004932 ORTHO05D005622 2.1e-89 333.2 308 61.7
Actinidia29889 Actinidia chinensis HOM05D004932 ORTHO05D005622 1.1e-88 330.9 306 61.1
CAN.G1837.4 Capsicum annuum HOM05D004932 ORTHO05D005622 1.1e-88 330.9 307 59.3
Hma1.2p1_0798F.1_g219580 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 1.8e-88 330.1 305 60.0
arahy.Tifrunner.gnm1.ann1.NAI4LE Arachis hypogaea HOM05D004932 ORTHO05D005622 2.4e-88 329.7 308 60.7
Medtr6g091780 Medicago truncatula HOM05D004932 ORTHO05D005622 4.0e-88 328.9 293 63.1
Nitab4.5_0007297g0010 Nicotiana tabacum HOM05D004932 ORTHO05D005622 6.9e-88 328.2 308 59.4
Nitab4.5_0000713g0230 Nicotiana tabacum HOM05D004932 ORTHO05D005622 2.0e-87 326.6 308 59.7
arahy.Tifrunner.gnm1.ann1.RRYY0T Arachis hypogaea HOM05D004932 ORTHO05D005622 2.6e-87 326.2 301 61.5
Thecc.09G093000 Theobroma cacao HOM05D004932 ORTHO05D005622 2.6e-87 326.2 301 61.8
Atru.chr7.1544 Acer truncatum HOM05D004932 ORTHO05D005622 2.2e-86 323.2 310 61.3
EL10Ac8g19275 Beta vulgaris HOM05D004932 ORTHO05D005622 3.8e-86 322.4 310 58.7
Ca_25616_v3 Cicer arietinum L. HOM05D004932 ORTHO05D005622 3.8e-86 322.4 296 60.1
MELO3C015448.2 Cucumis melo HOM05D004932 ORTHO05D005622 4.9e-86 322.0 304 61.5
Glyma.07G128200 Glycine max HOM05D004932 ORTHO05D005622 1.9e-85 320.1 309 60.2
Dinv42295 Davidia involucrata HOM05D004932 ORTHO05D005622 5.5e-85 318.5 309 57.0
CsaV3_1G040210 Cucumis sativus L. HOM05D004932 ORTHO05D005622 7.1e-85 318.2 303 60.4
CsaV3_UNG060480 Cucumis sativus L. HOM05D004932 ORTHO05D005622 7.1e-85 318.2 303 60.4
GSVIVG01015235001 Vitis vinifera HOM05D004932 ORTHO05D005622 1.2e-84 317.4 306 59.5
ClCG03G015800 Citrullus lanatus HOM05D004932 ORTHO05D005622 1.6e-84 317.0 304 59.9
QL02p063162 Quercus lobata HOM05D004932 ORTHO05D005622 3.5e-84 315.8 303 60.1
Dinv36742 Davidia involucrata HOM05D004932 ORTHO05D005622 6.0e-84 315.1 305 59.3
Cpa.g.sc7.248 Carica papaya HOM05D004932 ORTHO05D005622 7.9e-84 314.7 308 61.4
Lalb_Chr14g0375311 Lupinus albus HOM05D004932 ORTHO05D005622 7.9e-84 314.7 308 57.8
Potri.018G067300 Populus trichocarpa HOM05D004932 ORTHO05D005622 3.0e-83 312.8 308 57.5
Lj7C672T15 Lonicera japonica HOM05D004932 ORTHO05D005622 5.1e-83 312.0 299 58.9
Aqoxy7G01262 Aquilegia oxysepala HOM05D004932 ORTHO05D005622 6.7e-83 311.6 306 56.9
Sabra18G0059800 Salix brachista HOM05D004932 ORTHO05D005622 1.5e-82 310.5 309 57.9
MD02G1074400 Malus domestica HOM05D004932 ORTHO05D005622 1.9e-82 310.1 309 59.2
Nn6g35421 Nelumbo nucifera HOM05D004932 ORTHO05D005622 1.9e-82 310.1 306 57.5
CiPaw.03G218800 Carya illinoinensis HOM05D004932 ORTHO05D005622 2.5e-82 309.7 304 58.9
Os06g0150400 Oryza sativa ssp. japonica HOM05D004932 ORTHO05D005622 3.3e-82 309.3 284 60.6
PSO210G2479 Papaver somniferum HOM05D004932 ORTHO05D005622 1.6e-81 307.0 303 57.8
Zm00001eb376850 Zea mays HOM05D004932 ORTHO05D005622 2.1e-81 306.6 300 57.3
ECA234G2984 Erigeron canadensis HOM05D004932 ORTHO05D005622 2.8e-81 306.2 274 59.9
COL.COLO4_18228 Corchorus olitorius HOM05D004932 ORTHO05D005622 3.7e-81 305.8 301 58.5
ATR0789G094 Amborella trichopoda HOM05D004932 ORTHO05D005622 4.8e-81 305.4 301 52.8
Prupe.7G213500 Prunus persica HOM05D004932 ORTHO05D005622 6.2e-81 305.1 309 58.3
Haze_25884 Corylus avellana HOM05D004932 ORTHO05D005622 8.1e-81 304.7 304 57.6
Cc06_g11080 Coffea canephora HOM05D004932 ORTHO05D005622 6.9e-80 301.6 301 57.8
Medtr6g090810 Medicago truncatula HOM05D004932 ORTHO05D005622 1.5e-79 300.4 293 60.4
Sc18g0001850 Simmondsia chinensis HOM05D004932 ORTHO05D005622 1.5e-79 300.4 265 64.9
HanXRQChr10g0319131 Helianthus annuus HOM05D004932 ORTHO05D005622 2.6e-79 299.7 299 56.9
CDE05G0556 Ceratophyllum demersum HOM05D004932 ORTHO05D005622 7.6e-79 298.1 310 55.2
Phvul.004G172100 Phaseolus vulgaris HOM05D004932 ORTHO05D005622 1.7e-78 297.0 305 57.7
Glyma.01G003700 Glycine max HOM05D004932 ORTHO05D005622 3.8e-78 295.8 308 56.5
Oeu000325.1 Olea europaea HOM05D001440 ORTHO05D005622 8.4e-78 294.7 251 64.1
VMungo0464G1844 Vigna mungo HOM05D004932 ORTHO05D005622 1.1e-77 294.3 293 58.0
Psat1g049760 Pisum sativum HOM05D004932 ORTHO05D005622 3.2e-77 292.7 290 58.6
PSO210G4737 Papaver somniferum HOM05D004932 ORTHO05D005622 4.2e-77 292.4 296 57.1
CSS0009775 Camellia sinensis var. sinensis HOM05D004932 ORTHO05D005622 5.5e-77 292.0 305 56.4
HPP92_004560 Vanilla planifolia HOM05D004932 ORTHO05D005622 1.2e-76 290.8 308 54.9
RcHm_v2.0_Chr2g0092951 Rosa chinensis HOM05D004932 ORTHO05D005622 1.6e-76 290.4 293 58.7
Sed0008469 Sechium edule HOM05D004932 ORTHO05D005622 2.7e-76 289.7 239 65.3
Ciclev10009015m.g Citrus clementina HOM05D004932 ORTHO05D005622 3.5e-76 289.3 305 59.0
TPR.G35493 Trifolium pratense HOM05D004932 ORTHO05D005622 1.8e-75 287.0 291 57.7
Migut.K00580 Erythranthe guttata HOM05D004932 ORTHO05D005622 2.3e-75 286.6 304 55.3
Medtr6g092180 Medicago truncatula HOM05D004932 ORTHO05D005622 3.9e-75 285.8 293 58.7
AUR62031253 Chenopodium quinoa HOM05D004932 ORTHO05D005622 2.5e-74 283.1 307 53.1
CDE05G1139 Ceratophyllum demersum HOM05D004932 ORTHO05D005622 3.3e-74 282.7 245 62.4
Peaxi162Scf00444g00617 Petunia axillaris HOM05D004932 ORTHO05D005622 4.3e-74 282.3 308 51.3
AUR62027447 Chenopodium quinoa HOM05D004932 ORTHO05D005622 5.7e-74 282.0 307 53.7
arahy.Tifrunner.gnm1.ann1.XF40UC Arachis hypogaea HOM05D004932 ORTHO05D005622 1.3e-73 280.8 311 55.9
Ah.09g228480 Amaranthus hybridus HOM05D004932 ORTHO05D005622 1.6e-73 280.4 306 51.0
arahy.Tifrunner.gnm1.ann1.E8KE86 Arachis hypogaea HOM05D004932 ORTHO05D005622 2.1e-73 280.0 294 57.5
unitig_749.g14227 Utricularia gibba HOM05D004932 ORTHO05D005622 8.2e-73 278.1 300 54.0
vmacro06275 Vaccinium macrocarpon HOM05D004932 ORTHO05D005622 8.2e-73 278.1 300 55.7
Lsat_1_v5_gn_5_145840 Lactuca sativa HOM05D004932 ORTHO05D005622 1.1e-72 277.7 307 54.4
SGA_v2.0_scaffold10G05207 Striga asiatica HOM05D004932 ORTHO05D005622 5.9e-71 271.9 366 48.6
SEGI_24488 Sequoiadendron giganteum HOM05D004932 ORTHO05D005622 1.9e-69 266.9 324 48.8
DCAR_011989 Daucus carota HOM05D004932 ORTHO05D005622 6.1e-68 261.9 273 54.6
Rhsim03G0234400 Rhododendron simsii HOM05D004932 ORTHO05D005622 2.8e-65 253.1 311 51.1
unitig_78.g29619 Utricularia gibba HOM05D004932 ORTHO05D005622 3.2e-61 239.6 286 51.0
SHI02816 Sapria himalayana HOM05D004932 ORTHO05D005622 1.2e-60 237.7 227 57.3
TAR365G0154 Trochodendron aralioides HOM05D004932 ORTHO05D005622 2.7e-60 236.5 228 53.9
Medtr6g092150 Medicago truncatula HOM05D004932 ORTHO05D005622 1.8e-59 233.8 321 48.3
Cfa003116 Carpinus fangiana HOM05D004932 ORTHO05D005622 3.0e-59 233.0 233 57.9
Pp3c4_19450 Physcomitrium patens HOM05D004932 ORTHO05D005622 6.7e-59 231.9 309 46.9
Mapoly0075s0048 Marchantia polymorpha HOM05D004932 ORTHO05D005622 9.1e-56 221.5 323 45.8
AagrBONN_evm.TU.Sc2ySwM_362.2022 Anthoceros agrestis HOM05D004932 ORTHO05D005622 8.5e-54 214.9 200 57.0
HanXRQChr12g0355371 Helianthus annuus HOM05D004932 ORTHO05D005622 2.7e-52 209.9 299 46.5
arahy.Tifrunner.gnm1.ann1.GR1INA Arachis hypogaea HOM05D004932 ORTHO05D005622 2.8e-49 199.9 169 60.9
SMO361G0136 Selaginella moellendorffii HOM05D004932 ORTHO05D005622 2.3e-43 180.3 315 39.7
CBR_g8029 Chara braunii HOM05D004932 ORTHO05D005622 3.5e-39 166.4 292 36.0
Cc06_g18040 Coffea canephora HOM05D004932 ORTHO05D005622 3.6e-36 156.4 207 45.9
arahy.Tifrunner.gnm1.ann1.Y4MEFZ Arachis hypogaea HOM05D004932 ORTHO05D005622 3.1e-32 143.3 98 71.4
unitig_26.g9168 Utricularia gibba HOM05D004932 ORTHO05D005622 2.3e-27 127.1 141 52.5
Oeu037599.1 Olea europaea HOM05D004932 ORTHO05D005622 1.2e-26 124.8 285 37.2
PRCOL_00005979 Prasinoderma coloniale HOM05D004932 ORTHO05D005622 3.1e-24 116.7 228 31.1
MCO04G519 Micromonas commoda HOM05D004932 ORTHO05D005622 4.1e-24 116.3 166 36.1
Hma1.2p1_0798F.1_g219570 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 1.2e-23 114.8 138 51.4
Hma1.2p1_1074F.1_g254276 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 1.2e-23 114.8 138 51.4
Cre03.g151700 Chlamydomonas reinhardtii HOM05D004932 ORTHO05D005622 2.8e-20 103.6 221 31.7
CARHR109770 Cardamine hirsuta HOM05D004932 ORTHO05D005622 1.4e-19 101.3 119 55.5
arahy.Tifrunner.gnm1.ann1.XYZ5FS Arachis hypogaea HOM05D004932 ORTHO05D005622 5.2e-19 99.4 68 66.2
Hma1.2p1_1586F.1_g292210 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 4.4e-18 96.3 66 66.7
RcHm_v2.0_Chr5g0016971 Rosa chinensis HOM05D004932 ORTHO05D005622 2.9e-17 93.6 64 70.3
RcHm_v2.0_Chr4g0402141 Rosa chinensis HOM05D004932 ORTHO05D005622 1.4e-16 91.3 69 66.7
Hma1.2p1_1881F.1_g306380 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 5.0e-14 82.8 52 71.2
CiPaw.05G072200 Carya illinoinensis HOM05D004932 ORTHO05D005622 7.5e-10 68.9 50 62.0
unitig_26.g9167 Utricularia gibba HOM05D004932 ORTHO05D005622 1.7e-09 67.8 122 41.8
Oeu037598.1 Olea europaea HOM05D004932 ORTHO05D005622 2.2e-09 67.4 100 51.0
Nn3g21874 Nelumbo nucifera HOM05D004932 ORTHO05D005622 2.9e-09 67.0 45 64.4
Nn2g13205 Nelumbo nucifera HOM05D004932 ORTHO05D005622 1.1e-08 65.1 61 57.4
arahy.Tifrunner.gnm1.ann1.P1T2M1 Arachis hypogaea HOM05D000368 ORTHO05D000289 5.4e-08 62.8 39 71.8
TAR636G2165 Trochodendron aralioides HOM05D004932 ORTHO05D005622 1.7e-06 57.8 60 50.0


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