Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g51735 Brassica carinata HOM05D010143 ORTHO05D010368 6.7e-125 450.7 224 100.0
C01p10000 Brassica napus HOM05D010143 ORTHO05D010368 1.5e-103 379.8 190 98.4
A01p08560 Brassica napus HOM05D010143 ORTHO05D010368 2.6e-100 369.0 190 94.7
BraA01t00806Z Brassica rapa HOM05D010143 ORTHO05D010368 2.6e-100 369.0 190 94.7
Thhalv10001101m.g Eutrema salsugineum HOM05D010143 ORTHO05D010368 1.0e-64 250.8 207 62.3
BcaC09g51734 Brassica carinata HOM05D010143 ORTHO05D010368 2.3e-64 249.6 185 72.4
CARHR079170 Cardamine hirsuta HOM05D010143 ORTHO05D010368 1.6e-57 226.9 215 59.1
AL3G15190 Arabidopsis lyrata HOM05D010143 ORTHO05D010368 2.1e-57 226.5 199 63.3
AT3G04900 Arabidopsis thaliana HOM05D010143 ORTHO05D010368 2.7e-57 226.1 203 62.1
Carub.0003s0410 Capsella rubella HOM05D010143 ORTHO05D010368 2.8e-54 216.1 204 58.3
Sp4g30010 Schrenkiella parvula HOM05D010143 ORTHO05D010368 1.7e-48 196.8 169 65.7
THA.LOC104823057 Tarenaya hassleriana HOM05D010143 ORTHO05D010368 2.5e-47 193.0 201 54.2
Potri.004G144200 Populus trichocarpa HOM05D010143 ORTHO05D010368 6.9e-13 78.6 134 34.3
Sabra04G0095800 Salix brachista HOM05D010143 ORTHO05D010368 2.6e-12 76.6 137 32.8
Duzib138G0353 Durio zibethinus HOM05D016083 ORTHO05D010368 7.2e-10 68.6 71 43.7
C01p09990 Brassica napus HOM05D010143 ORTHO05D010368 9.4e-10 68.2 42 83.3
Atru.chr5.1356 Acer truncatum HOM05D010143 ORTHO05D010368 3.6e-09 66.2 71 42.3
Gohir.A11G120300 Gossypium hirsutum HOM05D016083 ORTHO05D010368 3.6e-09 66.2 236 28.4
QL12p022735 Quercus lobata HOM05D010143 ORTHO05D010368 3.6e-09 66.2 86 37.2
QL05p060436 Quercus lobata HOM05D012615 ORTHO05D010044 1.4e-08 64.3 84 36.9
Gorai.007G134300 Gossypium raimondii HOM05D016083 ORTHO05D010368 5.1e-08 62.4 235 28.1
Gohir.A12G006300 Gossypium hirsutum HOM05D016083 ORTHO05D010368 6.7e-08 62.0 94 34.0
Gohir.D12G005750 Gossypium hirsutum HOM05D016083 ORTHO05D010368 8.8e-08 61.6 71 40.8
Gorai.008G005700 Gossypium raimondii HOM05D016083 ORTHO05D010368 8.8e-08 61.6 71 40.8
ClCG09G006850 Citrullus lanatus HOM05D029525 ORTHO05D010368 1.1e-07 61.2 74 35.1
Sabra09G0097300 Salix brachista HOM05D000057 ORTHO05D010368 2.6e-07 60.1 73 38.4
CANSAT54G1951 Cannabis sativa HOM05D000520 ORTHO05D000399 4.4e-07 59.3 80 35.0
Potri.001G326100 Populus trichocarpa HOM05D014780 ORTHO05D010368 4.4e-07 59.3 88 38.6
Potri.009G126600 Populus trichocarpa HOM05D014780 ORTHO05D010368 5.7e-07 58.9 74 35.1
Sed0006744 Sechium edule HOM05D029525 ORTHO05D010368 9.7e-07 58.2 76 36.8
Haze_05094 Corylus avellana HOM05D010143 ORTHO05D010368 3.7e-06 56.2 76 31.6
CsaV3_7G028570 Cucumis sativus L. HOM05D029525 ORTHO05D010368 6.3e-06 55.5 84 31.0
Lj4g0007031 Lotus japonicus HOM05D010143 ORTHO05D010368 6.3e-06 55.5 76 34.2
CSS0027010 Camellia sinensis var. sinensis HOM05D030391 ORTHO05D010368 8.2e-06 55.1 83 39.8


User provided reference genes

Program Settings