Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g51720 Brassica carinata HOM05D000004 ORTHO05D000002 1.2e-115 419.9 217 100.0
Thhalv10002674m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 9.6e-28 127.9 203 34.5
Sp6g11780 Schrenkiella parvula HOM05D011239 ORTHO05D000002 4.5e-25 119.0 72 62.5
Carub.0001s3392 Capsella rubella HOM05D000004 ORTHO05D000002 7.6e-25 118.2 78 61.5
Thhalv10003066m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 2.9e-24 116.3 216 32.9
Sp6g11810 Schrenkiella parvula HOM05D000004 ORTHO05D000002 2.5e-23 113.2 73 57.5
BcaB07g31748 Brassica carinata HOM05D000004 ORTHO05D000002 3.0e-21 106.3 69 59.4
BcaC05g27699 Brassica carinata HOM05D033294 ORTHO05D032665 4.3e-20 102.4 74 58.1
Sp1g30880 Schrenkiella parvula HOM05D000004 ORTHO05D036776 7.7e-17 91.7 203 32.5
ECA238G2583 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.6e-14 82.8 87 37.9
Sp4g07510 Schrenkiella parvula HOM05D000004 ORTHO05D000002 6.7e-13 78.6 49 65.3
Ca_19472_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.5e-12 77.4 80 40.0
AL6G32420 Arabidopsis lyrata HOM05D008905 ORTHO05D000002 2.0e-12 77.0 70 44.3
ECA233G5755 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.0e-12 77.0 72 38.9
THA.LOC104801707 Tarenaya hassleriana HOM05D008905 ORTHO05D000002 2.0e-12 77.0 71 38.0
ClCG03G010050 Citrullus lanatus HOM05D016213 ORTHO05D000002 2.6e-12 76.6 69 39.1
ClCG09G014290 Citrullus lanatus HOM05D000004 ORTHO05D000002 2.6e-12 76.6 69 39.1
ECA232G0044 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.7e-12 75.5 71 38.0
Ca_12309_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 7.4e-12 75.1 80 37.5
Ciclev10030074m.g Citrus clementina HOM05D000004 ORTHO05D000002 9.7e-12 74.7 67 38.8
Psat3g172640 Pisum sativum HOM05D000028 ORTHO05D000390 1.3e-11 74.3 77 35.1
Ca_10305_v3 Cicer arietinum L. HOM05D001134 ORTHO05D000002 2.2e-11 73.6 66 45.5
Ca_27450_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.2e-11 73.6 80 36.2
TWI15G0520 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.2e-11 73.6 84 34.5
Ca_07639_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.8e-11 73.2 71 40.8
Ca_22822_v3 Cicer arietinum L. HOM05D003606 ORTHO05D000002 2.8e-11 73.2 80 37.5
MELO3C028848.2 Cucumis melo HOM05D009641 ORTHO05D013069 2.8e-11 73.2 70 37.1
TPR.G9173 Trifolium pratense HOM05D000004 ORTHO05D000002 2.8e-11 73.2 71 36.6
Ca_11846_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.7e-11 72.8 70 42.9
Ca_19490_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.7e-11 72.8 71 40.8
ECA238G3110 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.7e-11 72.8 71 36.6
Psat4g137240 Pisum sativum HOM05D000004 ORTHO05D000002 3.7e-11 72.8 75 34.7
Sp3g22620 Schrenkiella parvula HOM05D008905 ORTHO05D000002 3.7e-11 72.8 99 32.3
SpUn0027_0100 Schrenkiella parvula HOM05D008905 ORTHO05D000002 3.7e-11 72.8 99 32.3
Ca_11127_v3 Cicer arietinum L. HOM05D001650 ORTHO05D001592 4.8e-11 72.4 71 40.8
ECA233G4342 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.8e-11 72.4 70 32.9
Ah.09g237740 Amaranthus hybridus HOM05D016549 ORTHO05D000002 6.3e-11 72.0 71 39.4
Lsat_1_v5_gn_8_119700 Lactuca sativa HOM05D000004 ORTHO05D000002 6.3e-11 72.0 68 41.2
Psat1g213840 Pisum sativum HOM05D000004 ORTHO05D000002 6.3e-11 72.0 75 36.0
Psat6g022920 Pisum sativum HOM05D000004 ORTHO05D000002 6.3e-11 72.0 75 34.7
Psat7g152800 Pisum sativum HOM05D000004 ORTHO05D000002 6.3e-11 72.0 71 36.6
Sp6g23650 Schrenkiella parvula HOM05D008905 ORTHO05D000002 6.3e-11 72.0 81 37.0
Ca_20427_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 8.2e-11 71.6 71 40.8
ECA234G3749 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.2e-11 71.6 71 35.2
Sp2g06690 Schrenkiella parvula HOM05D008905 ORTHO05D000002 8.2e-11 71.6 73 35.6
Ca_16129_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.1e-10 71.2 71 38.0
Psat6g208920 Pisum sativum HOM05D000004 ORTHO05D000002 1.1e-10 71.2 79 34.2
BcaC07g37276 Brassica carinata HOM05D008905 ORTHO05D000002 1.4e-10 70.9 72 36.1
CANSAT54G0404 Cannabis sativa HOM05D000004 ORTHO05D000002 1.4e-10 70.9 71 36.6
Ca_08465_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.4e-10 70.9 71 38.0
Psat5g213280 Pisum sativum HOM05D000004 ORTHO05D000002 1.4e-10 70.9 71 35.2
Ca_02743_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.8e-10 70.5 66 43.9
Ca_07633_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.8e-10 70.5 66 43.9
Sp7g10840 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.8e-10 70.5 73 35.6
THA.LOC104809111 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.4e-10 70.1 69 39.1
TPR.G17488 Trifolium pratense HOM05D000004 ORTHO05D000002 2.4e-10 70.1 71 35.2
VMungo1127G1769 Vigna mungo HOM05D003938 ORTHO05D004759 2.4e-10 70.1 184 25.0
Psat5g155160 Pisum sativum HOM05D000004 ORTHO05D000002 3.1e-10 69.7 75 34.7
Psat5g191920 Pisum sativum HOM05D000004 ORTHO05D000002 3.1e-10 69.7 75 36.0
Psat7g007480 Pisum sativum HOM05D000004 ORTHO05D000002 3.1e-10 69.7 75 34.7
C03p11850 Brassica napus HOM05D008905 ORTHO05D000002 4.1e-10 69.3 77 37.7
BolC3t13655H Brassica oleracea HOM05D008905 ORTHO05D000002 4.1e-10 69.3 77 37.7
Ca_04545_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 4.1e-10 69.3 66 40.9
Ca_07730_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 4.1e-10 69.3 66 40.9
ClCG06G010650 Citrullus lanatus HOM05D000004 ORTHO05D000002 4.1e-10 69.3 69 34.8
ClCG09G015910 Citrullus lanatus HOM05D023487 ORTHO05D034708 4.1e-10 69.3 68 38.2
Sp6g13440 Schrenkiella parvula HOM05D008905 ORTHO05D000002 4.1e-10 69.3 73 37.0
ECA232G1905 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.3e-10 68.9 64 37.5
Sp3g28830 Schrenkiella parvula HOM05D000004 ORTHO05D000002 5.3e-10 68.9 77 32.5
Ca_07517_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 6.9e-10 68.6 71 39.4
A03p10320 Brassica napus HOM05D008905 ORTHO05D000002 9.1e-10 68.2 77 36.4
Ca_14712_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.2e-09 67.8 71 39.4
Psat0s2723g0120 Pisum sativum HOM05D003114 ORTHO05D003519 1.2e-09 67.8 66 36.4
Sp6g16040 Schrenkiella parvula HOM05D008905 ORTHO05D000002 1.2e-09 67.8 73 35.6
SpUn0001_0220 Schrenkiella parvula HOM05D008905 ORTHO05D000002 1.2e-09 67.8 73 34.2
CARHR263960 Cardamine hirsuta HOM05D008905 ORTHO05D000002 1.5e-09 67.4 73 32.9
Ca_11845_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.5e-09 67.4 71 39.4
Lalb_Chr24g0402721 Lupinus albus HOM05D000004 ORTHO05D000002 1.5e-09 67.4 71 35.2
Psat2g032840 Pisum sativum HOM05D000004 ORTHO05D000002 1.5e-09 67.4 71 35.2
Psat7g172320 Pisum sativum HOM05D000004 ORTHO05D000002 1.5e-09 67.4 70 35.7
Ca_10432_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.0e-09 67.0 71 33.8
Ca_12559_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.0e-09 67.0 71 32.4
Manes.03G212950 Manihot esculenta HOM05D003122 ORTHO05D000002 2.0e-09 67.0 213 24.9
AL7G36470 Arabidopsis lyrata HOM05D008905 ORTHO05D000002 2.6e-09 66.6 73 38.4
CARHR053150 Cardamine hirsuta HOM05D008905 ORTHO05D000002 2.6e-09 66.6 73 32.9
ClCG03G009890 Citrullus lanatus HOM05D000004 ORTHO05D000002 2.6e-09 66.6 82 26.8
Psat5g083560 Pisum sativum HOM05D000004 ORTHO05D000002 2.6e-09 66.6 71 33.8
Sopen00g004920 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-09 66.6 73 28.8
Psat0s1287g0080 Pisum sativum HOM05D000004 ORTHO05D000002 3.4e-09 66.2 71 31.0
THA.LOC104815241 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.4e-09 66.2 71 33.8
Ah.02g117930 Amaranthus hybridus HOM05D016549 ORTHO05D000002 4.5e-09 65.9 85 30.6
BcaC02g11045 Brassica carinata HOM05D014061 ORTHO05D000002 4.5e-09 65.9 70 37.1
Manes.17G059650 Manihot esculenta HOM05D003122 ORTHO05D010195 4.5e-09 65.9 67 43.3
Psat5g016360 Pisum sativum HOM05D000004 ORTHO05D000002 4.5e-09 65.9 71 33.8
THA.LOC104798668 Tarenaya hassleriana HOM05D008905 ORTHO05D000002 4.5e-09 65.9 71 31.0
Sp1g32560 Schrenkiella parvula HOM05D008905 ORTHO05D000002 5.9e-09 65.5 73 37.0
AT1G67020 Arabidopsis thaliana HOM05D010730 ORTHO05D000002 1.0e-08 64.7 77 33.8
Ca_16100_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.0e-08 64.7 71 36.6
ECA233G0504 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.0e-08 64.7 71 32.4
Nn6g31876 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.0e-08 64.7 77 33.8
Ah.05g174530 Amaranthus hybridus HOM05D016549 ORTHO05D000002 1.3e-08 64.3 71 35.2
Ca_12969_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.3e-08 64.3 70 37.1
Ca_23727_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.3e-08 64.3 66 39.4
Psat5g159360 Pisum sativum HOM05D000004 ORTHO05D000002 1.3e-08 64.3 71 32.4
VMungo0720G2483 Vigna mungo HOM05D002038 ORTHO05D030727 1.3e-08 64.3 71 33.8
Psat1g036880 Pisum sativum HOM05D000004 ORTHO05D000002 1.7e-08 63.9 75 37.3
VMungo0464G0875 Vigna mungo HOM05D003387 ORTHO05D005400 1.7e-08 63.9 78 32.1
Ca_01976_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.2e-08 63.5 71 33.8
TPR.G31865 Trifolium pratense HOM05D000004 ORTHO05D000002 2.9e-08 63.2 71 29.6
Ca_22696_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.8e-08 62.8 58 44.8
CsaV3_1G011190 Cucumis sativus L. HOM05D000004 ORTHO05D000002 5.0e-08 62.4 71 35.2
Sp3g28500 Schrenkiella parvula HOM05D000004 ORTHO05D000002 5.0e-08 62.4 69 33.3
BcaC04g21337 Brassica carinata HOM05D014061 ORTHO05D000002 6.5e-08 62.0 70 34.3
Carub.0004s0689 Capsella rubella HOM05D008905 ORTHO05D000002 6.5e-08 62.0 63 34.9
AUR62029623 Chenopodium quinoa HOM05D004927 ORTHO05D005798 6.5e-08 62.0 58 34.5
Psat3g027240 Pisum sativum HOM05D000004 ORTHO05D000002 6.5e-08 62.0 75 30.7
VMungo0464G1208 Vigna mungo HOM05D000004 ORTHO05D000002 6.5e-08 62.0 72 33.3
BcaB04g17630 Brassica carinata HOM05D008905 ORTHO05D000002 8.5e-08 61.6 70 34.3
Nn1g00297 Nelumbo nucifera HOM05D000004 ORTHO05D000002 8.5e-08 61.6 79 35.4
PSO675G7897 Papaver somniferum HOM05D000004 ORTHO05D000002 8.5e-08 61.6 67 32.8
Psat7g066480 Pisum sativum HOM05D000004 ORTHO05D000002 8.5e-08 61.6 71 32.4
Sed0022134 Sechium edule HOM05D000004 ORTHO05D000002 8.5e-08 61.6 207 22.2
TPR.G6695 Trifolium pratense HOM05D000004 ORTHO05D000002 1.1e-07 61.2 71 29.6
BcaB01g00892 Brassica carinata HOM05D014061 ORTHO05D000002 1.4e-07 60.8 70 32.9
BcaC02g07698 Brassica carinata HOM05D008905 ORTHO05D000002 1.4e-07 60.8 77 29.9
ECA238G4415 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-07 60.8 71 32.4
Psat0s1991g0120 Pisum sativum HOM05D000004 ORTHO05D000002 1.4e-07 60.8 63 33.3
Psat0s3577g0080 Pisum sativum HOM05D000004 ORTHO05D000002 1.4e-07 60.8 67 34.3
CANSAT35G0070 Cannabis sativa HOM05D000004 ORTHO05D000002 1.9e-07 60.5 123 31.7
Ca_05479_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.9e-07 60.5 69 34.8
Ca_12602_v3 Cicer arietinum L. HOM05D000836 ORTHO05D000002 1.9e-07 60.5 71 29.6
Ca_26814_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.5e-07 60.1 70 35.7
ClCG06G009980 Citrullus lanatus HOM05D000004 ORTHO05D000002 2.5e-07 60.1 71 33.8
Nn2g14669 Nelumbo nucifera HOM05D000004 ORTHO05D000002 2.5e-07 60.1 66 33.3
Psat2g127640 Pisum sativum HOM05D000004 ORTHO05D000002 3.2e-07 59.7 84 25.0
TPR.G11444 Trifolium pratense HOM05D000004 ORTHO05D000002 3.2e-07 59.7 61 37.7
VMungo1383G3216 Vigna mungo HOM05D001447 ORTHO05D010195 3.2e-07 59.7 66 33.3
BcaC03g16345 Brassica carinata HOM05D008905 ORTHO05D000002 5.5e-07 58.9 70 28.6
MELO3C002493.2 Cucumis melo HOM05D000004 ORTHO05D000002 5.5e-07 58.9 69 33.3
VMungo0331G1288 Vigna mungo HOM05D004910 ORTHO05D010195 5.5e-07 58.9 71 29.6
Ca_07353_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 9.4e-07 58.2 70 35.7
Nn5g27771 Nelumbo nucifera HOM05D000004 ORTHO05D000002 9.4e-07 58.2 79 35.4
PSO017G2872 Papaver somniferum HOM05D000004 ORTHO05D000002 9.4e-07 58.2 71 32.4
PSO063G4877 Papaver somniferum HOM05D000004 ORTHO05D000002 9.4e-07 58.2 70 35.7
Psat4g053400 Pisum sativum HOM05D000004 ORTHO05D000002 9.4e-07 58.2 68 33.8
Psat5g099160 Pisum sativum HOM05D000004 ORTHO05D000002 9.4e-07 58.2 87 25.3
VMungo1383G2683 Vigna mungo HOM05D003122 ORTHO05D000002 9.4e-07 58.2 71 29.6
BcaC02g11168 Brassica carinata HOM05D008905 ORTHO05D000002 1.2e-06 57.8 67 35.8
Ah.15g096030 Amaranthus hybridus HOM05D016549 ORTHO05D000002 1.6e-06 57.4 62 38.7
TPR.G6049 Trifolium pratense HOM05D012325 ORTHO05D013858 1.6e-06 57.4 56 35.7
VMungo1383G0727 Vigna mungo HOM05D000250 ORTHO05D002850 1.6e-06 57.4 63 33.3
COL.COLO4_05398 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.1e-06 57.0 60 35.0
Nn4g24324 Nelumbo nucifera HOM05D012325 ORTHO05D000002 2.1e-06 57.0 64 37.5
Psat1g201560 Pisum sativum HOM05D000004 ORTHO05D000002 2.1e-06 57.0 63 31.7
TPR.G6321 Trifolium pratense HOM05D000004 ORTHO05D000002 2.1e-06 57.0 67 25.4
Ca_03855_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.7e-06 56.6 74 37.8
Psat3g025360 Pisum sativum HOM05D000004 ORTHO05D000002 2.7e-06 56.6 68 26.5
Psat7g017240 Pisum sativum HOM05D000004 ORTHO05D000002 2.7e-06 56.6 68 26.5
ECA238G4401 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.7e-06 55.8 91 28.6
VMungo0720G2490 Vigna mungo HOM05D012939 ORTHO05D010195 4.7e-06 55.8 89 25.8
BraA07t30903Z Brassica rapa HOM05D010730 ORTHO05D013750 6.1e-06 55.5 81 32.1
Lalb_Chr12g0204601 Lupinus albus HOM05D003122 ORTHO05D000002 6.1e-06 55.5 70 31.4
Psat1g111280 Pisum sativum HOM05D000004 ORTHO05D000002 6.1e-06 55.5 66 30.3
Psat3g115000 Pisum sativum HOM05D003122 ORTHO05D000002 6.1e-06 55.5 208 25.0
Sp3g27120 Schrenkiella parvula HOM05D000004 ORTHO05D000002 6.1e-06 55.5 32 65.6
Sp5g17430 Schrenkiella parvula HOM05D000004 ORTHO05D000002 6.1e-06 55.5 72 30.6
TWI31G1488 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.1e-06 55.5 70 31.4
TWI34G0287 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.1e-06 55.5 70 31.4
TWI38G0029 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.1e-06 55.5 70 31.4
TWI81G0785 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.1e-06 55.5 70 31.4
Ca_28249_v3 Cicer arietinum L. HOM05D000290 ORTHO05D000002 7.9e-06 55.1 57 38.6
PSO170G5011 Papaver somniferum HOM05D000004 ORTHO05D000002 7.9e-06 55.1 69 30.4
PSO339G3572 Papaver somniferum HOM05D000004 ORTHO05D000002 7.9e-06 55.1 71 31.0
TPR.G27313 Trifolium pratense HOM05D000004 ORTHO05D000002 7.9e-06 55.1 61 29.5


User provided reference genes

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