Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g51511 Brassica carinata HOM05D000051 ORTHO05D013024 2.1e-106 389.0 196 100.0
C01p12380 Brassica napus HOM05D000051 ORTHO05D013024 8.0e-98 360.5 241 80.1
BolC1t01212H Brassica oleracea HOM05D000051 ORTHO05D013024 8.0e-98 360.5 241 80.1
BcaNung05876 Brassica carinata HOM05D000051 ORTHO05D013024 2.3e-92 342.4 241 76.3
C09p12870 Brassica napus HOM05D000051 ORTHO05D013024 4.2e-91 338.2 241 75.1
BolC9t54176H Brassica oleracea HOM05D000051 ORTHO05D013024 4.2e-91 338.2 241 75.1
A09p10900 Brassica napus HOM05D000051 ORTHO05D013024 9.5e-91 337.0 241 74.7
BcaC04g23034 Brassica carinata HOM05D002392 ORTHO05D002491 1.2e-90 336.7 241 74.7
BraA09t36730Z Brassica rapa HOM05D000051 ORTHO05D013024 4.7e-90 334.7 241 74.3
BcaC01g03038 Brassica carinata HOM05D000051 ORTHO05D013024 8.4e-47 191.0 209 55.0
A03p45700 Brassica napus HOM05D000051 ORTHO05D013024 7.8e-45 184.5 146 66.4
BraA03t13702Z Brassica rapa HOM05D000051 ORTHO05D013024 7.8e-45 184.5 146 66.4
C03p56840 Brassica napus HOM05D000051 ORTHO05D013024 3.3e-27 125.9 98 66.3
BolC3t17964H Brassica oleracea HOM05D000051 ORTHO05D013024 3.3e-27 125.9 98 66.3
BcaB08g34634 Brassica carinata HOM05D000051 ORTHO05D013024 2.7e-21 106.3 152 45.4
Sp3g29370 Schrenkiella parvula HOM05D000051 ORTHO05D013024 8.7e-20 101.3 97 59.8
C03p56850 Brassica napus HOM05D000051 ORTHO05D013024 4.8e-18 95.5 96 55.2
BolC3t17966H Brassica oleracea HOM05D000051 ORTHO05D013024 4.8e-18 95.5 96 55.2
Thhalv10015652m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 6.9e-09 65.1 81 42.0
BraA10t43079Z Brassica rapa HOM05D000051 ORTHO05D000015 1.2e-08 64.3 112 37.5
C02p15130 Brassica napus HOM05D000051 ORTHO05D000015 3.4e-08 62.8 215 29.3
Thhalv10013717m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.4e-08 62.8 72 47.2
AL8G32110 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 7.7e-08 61.6 81 39.5
C03p15710 Brassica napus HOM05D000051 ORTHO05D000015 1.7e-07 60.5 169 27.2
BolC2t07630H Brassica oleracea HOM05D000051 ORTHO05D000015 2.9e-07 59.7 220 29.5
Carub.0001s3076 Capsella rubella HOM05D000051 ORTHO05D000015 6.5e-07 58.5 85 37.6
BraA02t05969Z Brassica rapa HOM05D000051 ORTHO05D000015 8.5e-07 58.2 181 31.5
AL595U10020 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.1e-06 57.8 75 42.7
BcaC01g06424 Brassica carinata HOM05D000051 ORTHO05D000015 1.1e-06 57.8 83 34.9
BolC9t57643H Brassica oleracea HOM05D000051 ORTHO05D000015 1.1e-06 57.8 72 45.8
THA.LOC104817871 Tarenaya hassleriana HOM05D000051 ORTHO05D000015 1.1e-06 57.8 92 37.0
AL8G32080 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.4e-06 57.4 75 44.0
A02p09160 Brassica napus HOM05D000051 ORTHO05D000015 1.4e-06 57.4 81 39.5
BraA02t05983Z Brassica rapa HOM05D000051 ORTHO05D000015 1.4e-06 57.4 81 39.5
Carub.0007s2694 Capsella rubella HOM05D000051 ORTHO05D000015 1.4e-06 57.4 72 41.7
AL8G32650 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.9e-06 57.0 81 38.3
CARHR269870 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.9e-06 57.0 76 42.1
C09p47990 Brassica napus HOM05D000051 ORTHO05D023684 2.5e-06 56.6 75 42.7
CARHR139720 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.5e-06 56.6 78 42.3
BcaB01g04399 Brassica carinata HOM05D000051 ORTHO05D000015 4.2e-06 55.8 120 31.7
A03p13310 Brassica napus HOM05D000051 ORTHO05D000015 4.2e-06 55.8 75 44.0
A03p13450 Brassica napus HOM05D000051 ORTHO05D000015 4.2e-06 55.8 98 34.7
C03p15750 Brassica napus HOM05D000051 ORTHO05D000015 4.2e-06 55.8 98 34.7
BraA03t10643Z Brassica rapa HOM05D000051 ORTHO05D000015 4.2e-06 55.8 75 44.0
CARHR269840 Cardamine hirsuta HOM05D000051 ORTHO05D000015 4.2e-06 55.8 79 41.8
Thhalv10015809m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.2e-06 55.8 157 30.6
BcaC06g31036 Brassica carinata HOM05D000051 ORTHO05D000015 5.5e-06 55.5 234 27.4
C02p15320 Brassica napus HOM05D000051 ORTHO05D000015 5.5e-06 55.5 81 38.3
BolC2t07648H Brassica oleracea HOM05D000051 ORTHO05D000015 5.5e-06 55.5 81 38.3
BolC9t57641H Brassica oleracea HOM05D000051 ORTHO05D023684 5.5e-06 55.5 72 45.8
Thhalv10015273m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.5e-06 55.5 80 37.5
AL5G38170 Arabidopsis lyrata HOM05D000051 ORTHO05D023684 7.2e-06 55.1 73 42.5
AT5G56380 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 7.2e-06 55.1 90 35.6
Carub.0007s2699 Capsella rubella HOM05D000051 ORTHO05D000015 7.2e-06 55.1 219 27.9
AL7G51940 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 9.4e-06 54.7 84 39.3
BraA03t10655Z Brassica rapa HOM05D000051 ORTHO05D000015 9.4e-06 54.7 80 42.5
CARHR269850 Cardamine hirsuta HOM05D000051 ORTHO05D000015 9.4e-06 54.7 124 35.5


User provided reference genes

Program Settings