Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 4.1e-153 544.7 270 100.0
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 3.6e-149 531.6 267 98.9
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 1.4e-148 529.6 267 98.5
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 1.4e-148 529.6 267 98.5
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 3.5e-144 515.0 260 98.8
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 3.9e-143 511.5 267 96.3
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 3.1e-140 501.9 264 93.6
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 2.0e-139 499.2 264 93.2
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 3.5e-136 488.4 267 89.9
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 1.6e-133 479.6 267 89.1
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 1.1e-132 476.9 264 89.0
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 1.1e-132 476.9 264 89.0
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 6.6e-127 457.6 265 86.8
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 2.4e-108 396.0 269 74.7
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 3.1e-108 395.6 264 75.4
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 1.5e-107 393.3 267 75.7
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 4.5e-107 391.7 265 74.3
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 9.9e-107 390.6 264 75.0
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 1.3e-106 390.2 265 72.1
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 4.9e-106 388.3 265 73.2
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 1.4e-105 386.7 269 73.6
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 1.4e-105 386.7 269 73.2
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 4.2e-105 385.2 268 73.5
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 5.4e-105 384.8 268 72.8
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 7.1e-105 384.4 264 72.7
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 7.1e-105 384.4 269 73.2
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 6.0e-104 381.3 268 73.1
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 7.9e-104 380.9 265 72.1
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 7.9e-104 380.9 265 72.1
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 1.0e-103 380.6 265 73.2
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 1.8e-103 379.8 267 70.4
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 1.8e-103 379.8 265 71.7
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 1.8e-103 379.8 263 73.4
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 2.3e-103 379.4 267 73.8
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 2.3e-103 379.4 262 72.5
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 3.9e-103 378.6 268 72.4
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 3.9e-103 378.6 264 72.7
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 5.1e-103 378.3 267 73.0
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 5.1e-103 378.3 271 72.3
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 6.7e-103 377.9 264 72.3
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 6.7e-103 377.9 262 70.6
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 6.7e-103 377.9 264 72.7
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 8.7e-103 377.5 265 71.3
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 8.7e-103 377.5 264 71.6
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 2.5e-102 375.9 262 74.0
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 2.5e-102 375.9 264 72.0
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 2.5e-102 375.9 267 73.0
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 4.3e-102 375.2 274 70.8
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 5.6e-102 374.8 263 73.0
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 7.4e-102 374.4 262 72.5
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 9.6e-102 374.0 267 73.8
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 1.3e-101 373.6 268 69.4
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 1.3e-101 373.6 264 72.0
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 1.3e-101 373.6 264 72.0
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 1.6e-101 373.2 265 70.9
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 1.6e-101 373.2 264 69.7
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 1.6e-101 373.2 264 72.0
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 2.1e-101 372.9 265 70.6
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 2.1e-101 372.9 267 71.5
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 4.8e-101 371.7 248 71.8
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 4.8e-101 371.7 263 70.7
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 1.1e-100 370.5 256 74.2
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 1.1e-100 370.5 264 70.1
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 5.3e-100 368.2 263 70.7
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 6.9e-100 367.9 284 68.3
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 3.4e-99 365.5 263 70.3
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 3.4e-99 365.5 270 71.1
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 2.2e-98 362.8 264 70.5
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 4.9e-98 361.7 263 71.1
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 8.4e-98 360.9 268 72.0
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 1.4e-97 360.1 267 70.4
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 2.5e-97 359.4 262 70.2
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 3.2e-97 359.0 262 71.0
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 4.2e-97 358.6 262 68.3
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 7.1e-97 357.8 264 69.3
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 3.5e-96 355.5 266 71.1
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 6.0e-96 354.8 287 65.9
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 6.7e-95 351.3 262 68.3
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 1.5e-94 350.1 297 62.3
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 1.9e-94 349.7 275 66.2
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 1.3e-93 347.1 262 69.1
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 2.8e-93 345.9 267 66.3
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 4.8e-93 345.1 281 66.2
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 2.4e-92 342.8 300 64.7
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 5.3e-92 341.7 241 71.8
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 2.6e-91 339.3 285 66.7
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 2.3e-87 326.2 270 64.1
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 3.0e-87 325.9 271 64.2
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 4.3e-86 322.0 337 56.4
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 9.0e-84 314.3 241 66.4
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 1.2e-83 313.9 246 64.2
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 3.0e-79 299.3 243 61.7
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 5.3e-76 288.5 505 39.0
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 3.1e-68 262.7 192 72.4
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 2.0e-67 260.0 255 54.1
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 6.1e-64 248.4 177 70.6
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 1.5e-57 227.3 166 66.3
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 3.6e-56 222.6 185 63.8
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 2.6e-54 216.5 173 64.7
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 3.6e-48 196.1 154 63.6
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 1.2e-46 191.0 178 58.4
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 6.3e-45 185.3 165 61.8
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 3.5e-35 152.9 239 38.1
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 2.8e-32 143.3 88 75.0
Zm00001eb395460 Zea mays HOM05D006577 ORTHO05D008428 1.2e-27 127.9 95 69.5
Zm00001eb339160 Zea mays HOM05D006577 ORTHO05D008428 1.7e-26 124.0 94 68.1
VMungo0251G3731 Vigna mungo HOM05D006577 ORTHO05D008428 1.9e-25 120.6 93 68.8
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 5.6e-25 119.0 194 43.3
Os06g0708900 Oryza sativa ssp. japonica HOM05D006577 ORTHO05D008428 7.3e-25 118.6 96 64.6
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 7.1e-20 102.1 115 53.0
Cre06.g280700 Chlamydomonas reinhardtii HOM05D006577 ORTHO05D008428 2.0e-14 84.0 120 39.2
TPR.G13376 Trifolium pratense HOM05D006577 ORTHO05D008428 4.9e-13 79.3 67 61.2
CARHR123800 Cardamine hirsuta HOM05D006577 ORTHO05D008428 1.3e-10 71.2 37 83.8


User provided reference genes

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