Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g51119 Brassica carinata HOM05D021885 ORTHO05D024379 1.7e-45 185.7 92 100.0
BolC1t01622H Brassica oleracea HOM05D021885 ORTHO05D024379 2.1e-32 142.1 98 80.6
A01p13790 Brassica napus HOM05D021885 ORTHO05D024379 1.4e-31 139.4 98 78.6
C01p16790 Brassica napus HOM05D021885 ORTHO05D024379 2.2e-29 132.1 98 77.6
BraA01t01325Z Brassica rapa HOM05D021885 ORTHO05D024379 2.8e-21 105.1 64 87.5
A07p16700 Brassica napus HOM05D000231 ORTHO05D000132 1.9e-17 92.4 54 90.7
BcaC06g34808 Brassica carinata HOM05D000231 ORTHO05D000132 9.5e-17 90.1 54 90.7
C07p24420 Brassica napus HOM05D000231 ORTHO05D000132 9.5e-17 90.1 54 90.7
BolC7t42962H Brassica oleracea HOM05D000231 ORTHO05D000132 9.5e-17 90.1 54 90.7
BcaB02g09948 Brassica carinata HOM05D000231 ORTHO05D000132 2.8e-16 88.6 58 84.5
BraA07t29393Z Brassica rapa HOM05D000231 ORTHO05D000132 2.8e-16 88.6 54 87.0
Sp2g29410 Schrenkiella parvula HOM05D000231 ORTHO05D000132 6.1e-16 87.4 54 87.0
Thhalv10004441m.g Eutrema salsugineum HOM05D000231 ORTHO05D000132 2.0e-14 82.4 54 81.5
Carub.0008s2725 Capsella rubella HOM05D000231 ORTHO05D000132 3.4e-14 81.6 53 81.1
CARHR280370 Cardamine hirsuta HOM05D000231 ORTHO05D000132 4.9e-13 77.8 54 79.6
AL8G44080 Arabidopsis lyrata HOM05D000231 ORTHO05D000132 1.1e-12 76.6 54 77.8
AT5G67260 Arabidopsis thaliana HOM05D000231 ORTHO05D000132 1.6e-11 72.8 52 76.9
Carub.0005s1642 Capsella rubella HOM05D000231 ORTHO05D000132 5.9e-11 70.9 54 68.5
Thhalv10010471m.g Eutrema salsugineum HOM05D000231 ORTHO05D000132 3.8e-10 68.2 54 63.0
AT3G50070 Arabidopsis thaliana HOM05D000231 ORTHO05D000132 6.6e-10 67.4 54 64.8
Sp5g12040 Schrenkiella parvula HOM05D000231 ORTHO05D000132 1.5e-09 66.2 58 58.6
AL5G30190 Arabidopsis lyrata HOM05D000231 ORTHO05D000132 2.5e-09 65.5 54 61.1
BcaC06g33110 Brassica carinata HOM05D000231 ORTHO05D000132 1.0e-07 60.1 51 60.8
BcaB05g23184 Brassica carinata HOM05D000231 ORTHO05D000132 8.9e-07 57.0 52 57.7
THA.LOC104821243 Tarenaya hassleriana HOM05D000231 ORTHO05D000132 8.9e-07 57.0 54 59.3
BcaC06g33281 Brassica carinata HOM05D000231 ORTHO05D000132 2.0e-06 55.8 52 61.5
C07p45640 Brassica napus HOM05D000231 ORTHO05D000132 2.0e-06 55.8 52 61.5
BolC7t45085H Brassica oleracea HOM05D000231 ORTHO05D000132 2.0e-06 55.8 52 61.5
CARHR159140 Cardamine hirsuta HOM05D000231 ORTHO05D000132 4.4e-06 54.7 52 61.5
A03p47690 Brassica napus HOM05D000231 ORTHO05D000132 5.7e-06 54.3 52 59.6
BraA03t13880Z Brassica rapa HOM05D000231 ORTHO05D000132 5.7e-06 54.3 52 59.6


User provided reference genes

Program Settings