Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g51106 Brassica carinata HOM05D013699 ORTHO05D023882 1.2e-50 203.0 110 100.0
BcaC03g13198 Brassica carinata HOM05D013699 ORTHO05D017637 2.3e-41 172.2 95 96.8
BraA06t24278Z Brassica rapa HOM05D013699 ORTHO05D023882 1.7e-36 156.0 109 80.7
BolC2t06279H Brassica oleracea HOM05D013699 ORTHO05D017637 1.3e-20 103.2 56 96.4
BraA09t38272Z Brassica rapa HOM05D010756 ORTHO05D000925 2.7e-18 95.5 105 52.4
BraA08t33512Z Brassica rapa HOM05D001239 ORTHO05D000925 1.0e-17 93.6 100 57.0
BraA01t00649Z Brassica rapa HOM05D001239 ORTHO05D000925 1.7e-17 92.8 93 54.8
BcaC02g12210 Brassica carinata HOM05D000003 ORTHO05D000925 2.3e-17 92.4 100 55.0
BraA10t43824Z Brassica rapa HOM05D001239 ORTHO05D000925 1.5e-16 89.7 100 53.0
BcaC09g49165 Brassica carinata HOM05D000032 ORTHO05D000925 9.6e-16 87.0 89 55.1
BolC1t03157H Brassica oleracea HOM05D010756 ORTHO05D000925 1.2e-15 86.7 73 64.4
BolC8t49469H Brassica oleracea HOM05D001239 ORTHO05D000925 2.8e-15 85.5 103 49.5
BraA07t28081Z Brassica rapa HOM05D001239 ORTHO05D000925 4.7e-15 84.7 110 47.3
BolC2t06823H Brassica oleracea HOM05D010756 ORTHO05D000925 1.1e-14 83.6 92 53.3
BolC3t14366H Brassica oleracea HOM05D010756 ORTHO05D000925 1.2e-13 80.1 109 45.0
C06p08080 Brassica napus HOM05D001239 ORTHO05D000925 2.0e-13 79.3 99 46.5
C08p32300 Brassica napus HOM05D010756 ORTHO05D000925 2.0e-13 79.3 93 48.4
BolC8t50844H Brassica oleracea HOM05D010756 ORTHO05D000925 2.0e-13 79.3 93 48.4
BcaC09g51103 Brassica carinata HOM05D023287 ORTHO05D023882 2.6e-13 79.0 43 97.7
BraA04t17503Z Brassica rapa HOM05D001239 ORTHO05D000925 5.8e-13 77.8 94 47.9
BolC7t42027H Brassica oleracea HOM05D001239 ORTHO05D000925 1.4e-11 73.2 94 46.8
BcaC08g44551 Brassica carinata HOM05D010756 ORTHO05D023874 1.9e-11 72.8 93 45.2
BolC6t35759H Brassica oleracea HOM05D010756 ORTHO05D000925 3.2e-11 72.0 93 46.2
BcaC01g06146 Brassica carinata HOM05D001239 ORTHO05D000925 5.4e-11 71.2 100 45.0
BolC7t45220H Brassica oleracea HOM05D001239 ORTHO05D000925 7.1e-11 70.9 94 45.7
BcaC05g30415 Brassica carinata HOM05D010756 ORTHO05D023874 1.2e-10 70.1 93 43.0
BcaC01g01483 Brassica carinata HOM05D001239 ORTHO05D000925 6.0e-10 67.8 100 43.0
BraA02t07341Z Brassica rapa HOM05D013699 ORTHO05D017637 6.0e-10 67.8 47 78.7
C07p34530 Brassica napus HOM05D009883 ORTHO05D042457 7.8e-10 67.4 93 41.9
BolC7t43984H Brassica oleracea HOM05D009883 ORTHO05D042457 7.8e-10 67.4 93 41.9
BraA03t10715Z Brassica rapa HOM05D013699 ORTHO05D017637 7.8e-10 67.4 70 54.3
BolC3t17885H Brassica oleracea HOM05D009883 ORTHO05D000925 1.0e-09 67.0 73 54.8
BolC6t37992H Brassica oleracea HOM05D010756 ORTHO05D000925 1.3e-09 66.6 94 44.7
BolC2t08127H Brassica oleracea HOM05D010756 ORTHO05D000925 1.7e-09 66.2 81 48.1
BolC8t49091H Brassica oleracea HOM05D001239 ORTHO05D000925 1.7e-09 66.2 94 43.6
C03p75170 Brassica napus HOM05D001239 ORTHO05D000925 5.1e-09 64.7 80 43.8
BolC9t59239H Brassica oleracea HOM05D016984 ORTHO05D018748 5.1e-09 64.7 81 46.9
BraA02t08675Z Brassica rapa HOM05D001239 ORTHO05D000925 6.6e-09 64.3 87 46.0
BraA06t27638Z Brassica rapa HOM05D010756 ORTHO05D033742 2.5e-08 62.4 64 53.1
C01p16740 Brassica napus HOM05D009883 ORTHO05D014964 7.3e-08 60.8 75 48.0
BolC7t43973H Brassica oleracea HOM05D010756 ORTHO05D033742 7.3e-08 60.8 70 51.4
C07p55460 Brassica napus HOM05D009883 ORTHO05D014964 1.6e-07 59.7 75 46.7
BcaB07g32252 Brassica carinata HOM05D009883 ORTHO05D000925 2.1e-07 59.3 105 35.2
C02p10910 Brassica napus HOM05D010911 ORTHO05D041405 2.1e-07 59.3 110 40.9
BraA03t13396Z Brassica rapa HOM05D009883 ORTHO05D024588 2.8e-07 58.9 73 46.6
C08p16430 Brassica napus HOM05D009883 ORTHO05D024588 3.6e-07 58.5 73 45.2
C08p33880 Brassica napus HOM05D009883 ORTHO05D024588 3.6e-07 58.5 75 44.0
BcaB07g32459 Brassica carinata HOM05D009883 ORTHO05D014964 4.8e-07 58.2 66 48.5
BolC2t07161H Brassica oleracea HOM05D010911 ORTHO05D041405 4.8e-07 58.2 110 40.0
C05p06360 Brassica napus HOM05D009883 ORTHO05D024588 8.1e-07 57.4 73 45.2
C08p48040 Brassica napus HOM05D001239 ORTHO05D000925 8.1e-07 57.4 107 37.4
BolC5t29233H Brassica oleracea HOM05D009883 ORTHO05D024588 8.1e-07 57.4 73 45.2
BolC8t47090H Brassica oleracea HOM05D009883 ORTHO05D013233 8.1e-07 57.4 74 44.6
A05p29390 Brassica napus HOM05D009883 ORTHO05D014964 1.1e-06 57.0 99 38.4
A02p23490 Brassica napus HOM05D023287 ORTHO05D023882 2.4e-06 55.8 40 72.5
BcaC04g19170 Brassica carinata HOM05D001239 ORTHO05D000925 3.1e-06 55.5 100 40.0
BcaC07g39054 Brassica carinata HOM05D001239 ORTHO05D000925 3.1e-06 55.5 99 35.4
C02p48850 Brassica napus HOM05D010911 ORTHO05D024084 3.1e-06 55.5 58 51.7
BolC4t27575H Brassica oleracea HOM05D009883 ORTHO05D014964 4.0e-06 55.1 70 44.3
BolC1t04990H Brassica oleracea HOM05D001239 ORTHO05D000925 5.3e-06 54.7 82 39.0
BcaC01g00118 Brassica carinata HOM05D001239 ORTHO05D000925 6.9e-06 54.3 81 40.7
C06p07680 Brassica napus HOM05D001239 ORTHO05D000925 6.9e-06 54.3 73 45.2
BraA05t20543Z Brassica rapa HOM05D016984 ORTHO05D018748 6.9e-06 54.3 55 56.4


User provided reference genes

Program Settings