Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g51105 Brassica carinata HOM05D009883 ORTHO05D014964 1.9e-60 235.7 126 100.0
C04p60840 Brassica napus HOM05D009883 ORTHO05D014964 1.8e-34 149.4 167 58.1
BcaB07g32459 Brassica carinata HOM05D009883 ORTHO05D014964 2.4e-31 139.0 115 67.0
BcaB06g28528 Brassica carinata HOM05D009883 ORTHO05D014964 1.7e-21 106.3 57 91.2
C01p16740 Brassica napus HOM05D009883 ORTHO05D014964 1.3e-19 100.1 63 92.1
C07p55460 Brassica napus HOM05D009883 ORTHO05D014964 4.0e-18 95.1 64 87.5
C03p45410 Brassica napus HOM05D009883 ORTHO05D014964 9.0e-18 94.0 57 75.4
BraA01t04009Z Brassica rapa HOM05D009883 ORTHO05D014964 4.4e-17 91.7 57 73.7
BcaB02g07877 Brassica carinata HOM05D009883 ORTHO05D014964 1.7e-16 89.7 57 70.2
BolC4t27575H Brassica oleracea HOM05D009883 ORTHO05D014964 2.5e-12 75.9 51 84.3
A05p29390 Brassica napus HOM05D009883 ORTHO05D014964 1.6e-11 73.2 44 90.9
C05p06360 Brassica napus HOM05D009883 ORTHO05D024588 2.0e-09 66.2 63 68.3
BcaC08g44116 Brassica carinata HOM05D012955 ORTHO05D013233 7.6e-09 64.3 89 51.7
C08p16430 Brassica napus HOM05D009883 ORTHO05D024588 9.9e-09 63.9 63 66.7
BolC5t29233H Brassica oleracea HOM05D009883 ORTHO05D024588 9.9e-09 63.9 63 66.7
C02p10910 Brassica napus HOM05D010911 ORTHO05D041405 1.3e-08 63.5 65 66.2
C08p33880 Brassica napus HOM05D009883 ORTHO05D024588 1.3e-08 63.5 64 65.6
BolC2t07161H Brassica oleracea HOM05D010911 ORTHO05D041405 1.3e-08 63.5 65 66.2
C02p48850 Brassica napus HOM05D010911 ORTHO05D024084 2.2e-08 62.8 64 65.6
C07p34530 Brassica napus HOM05D009883 ORTHO05D042457 2.9e-08 62.4 70 61.4
BolC7t43984H Brassica oleracea HOM05D009883 ORTHO05D042457 2.9e-08 62.4 70 61.4
BolC2t10979H Brassica oleracea HOM05D010911 ORTHO05D024084 4.9e-08 61.6 64 65.6
BcaC09g51604 Brassica carinata HOM05D010911 ORTHO05D013233 6.4e-08 61.2 43 76.7
C01p19620 Brassica napus HOM05D010911 ORTHO05D024084 1.1e-07 60.5 64 64.1
BcaC03g13094 Brassica carinata HOM05D012955 ORTHO05D013233 1.4e-07 60.1 61 63.9
BolC2t06001H Brassica oleracea HOM05D012955 ORTHO05D013233 1.4e-07 60.1 61 63.9
BcaC03g16984 Brassica carinata HOM05D010911 ORTHO05D024084 2.4e-07 59.3 64 64.1
C01p11480 Brassica napus HOM05D012955 ORTHO05D013233 2.4e-07 59.3 64 60.9
BolC1t01117H Brassica oleracea HOM05D012955 ORTHO05D013233 5.5e-07 58.2 64 59.4
BolC8t47090H Brassica oleracea HOM05D009883 ORTHO05D013233 1.2e-06 57.0 66 60.6
BcaC05g30415 Brassica carinata HOM05D010756 ORTHO05D023874 1.6e-06 56.6 58 62.1
BcaC08g44551 Brassica carinata HOM05D010756 ORTHO05D023874 1.6e-06 56.6 58 62.1
BcaC07g40017 Brassica carinata HOM05D010911 ORTHO05D013233 2.1e-06 56.2 58 62.1
BcaB06g26236 Brassica carinata HOM05D010911 ORTHO05D013233 4.6e-06 55.1 63 58.7
C09p12520 Brassica napus HOM05D031612 ORTHO05D041637 4.6e-06 55.1 63 61.9
BolC6t35759H Brassica oleracea HOM05D010756 ORTHO05D000925 7.9e-06 54.3 61 60.7


User provided reference genes

Program Settings