Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 1.9e-47 192.2 100 100.0
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 1.9e-47 192.2 100 100.0
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 4.3e-47 191.0 100 99.0
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 4.3e-47 191.0 100 99.0
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 1.3e-43 179.5 100 93.0
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 1.7e-43 179.1 100 93.0
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 1.2e-25 119.8 94 62.8
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 2.1e-25 119.0 94 63.8
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 4.6e-25 117.9 67 88.1
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 6.0e-25 117.5 94 60.6
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 7.8e-25 117.1 94 60.6
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 1.3e-24 116.3 92 60.9
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 1.3e-24 116.3 94 62.8
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 1.7e-24 115.9 94 60.6
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 1.7e-24 115.9 94 62.8
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 3.0e-24 115.2 91 63.7
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 3.9e-24 114.8 94 57.4
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 3.9e-24 114.8 94 60.6
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 5.1e-24 114.4 94 60.6
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 5.1e-24 114.4 94 60.6
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 6.6e-24 114.0 94 57.4
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 8.7e-24 113.6 94 59.6
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 8.7e-24 113.6 94 59.6
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 8.7e-24 113.6 94 59.6
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 8.7e-24 113.6 94 60.6
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 1.1e-23 113.2 94 59.6
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.5e-23 112.8 94 59.6
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 1.5e-23 112.8 94 59.6
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 1.5e-23 112.8 94 58.5
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 1.5e-23 112.8 95 62.1
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 1.9e-23 112.5 95 58.9
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 2.5e-23 112.1 94 60.6
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 3.3e-23 111.7 94 58.5
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 4.3e-23 111.3 90 61.1
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 4.3e-23 111.3 90 61.1
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 5.6e-23 110.9 92 60.9
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 7.3e-23 110.5 94 58.5
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 9.6e-23 110.2 92 59.8
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 9.6e-23 110.2 94 57.4
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 9.6e-23 110.2 93 57.0
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 1.3e-22 109.8 94 59.6
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 1.6e-22 109.4 94 57.4
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 1.6e-22 109.4 94 57.4
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 1.6e-22 109.4 94 59.6
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 2.1e-22 109.0 94 55.3
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 2.1e-22 109.0 92 60.9
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 2.1e-22 109.0 92 58.7
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 2.1e-22 109.0 94 58.5
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 3.6e-22 108.2 94 56.4
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 4.8e-22 107.8 94 55.3
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 4.8e-22 107.8 94 56.4
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 6.2e-22 107.5 94 57.4
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 6.2e-22 107.5 94 57.4
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 8.1e-22 107.1 94 56.4
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 8.1e-22 107.1 94 56.4
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 8.1e-22 107.1 94 58.5
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 1.1e-21 106.7 93 57.0
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 1.1e-21 106.7 94 54.3
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 1.1e-21 106.7 94 56.4
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 1.1e-21 106.7 94 56.4
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 1.4e-21 106.3 94 57.4
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 1.4e-21 106.3 94 57.4
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 1.8e-21 105.9 92 58.7
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 2.4e-21 105.5 92 58.7
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 4.0e-21 104.8 95 56.8
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 4.0e-21 104.8 93 54.8
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 5.3e-21 104.4 92 57.6
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 5.3e-21 104.4 93 53.8
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 6.9e-21 104.0 94 55.3
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 6.9e-21 104.0 94 55.3
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 1.2e-20 103.2 91 54.9
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 1.2e-20 103.2 95 54.7
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 1.5e-20 102.8 94 54.3
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 2.0e-20 102.4 94 53.2
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 2.0e-20 102.4 95 54.7
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 2.0e-20 102.4 95 54.7
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 2.0e-20 102.4 95 54.7
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 5.8e-20 100.9 79 63.3
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 5.8e-20 100.9 94 53.2
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 7.6e-20 100.5 94 56.4
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 7.6e-20 100.5 91 53.8
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 2.9e-19 98.6 92 53.3
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 2.9e-19 98.6 96 55.2
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 3.8e-19 98.2 94 55.3
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 8.4e-19 97.1 81 59.3
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 1.4e-18 96.3 91 51.6
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 1.9e-18 95.9 91 51.6
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 4.2e-18 94.7 92 51.1
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 7.1e-18 94.0 93 49.5
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 2.1e-17 92.4 94 46.8
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 2.1e-17 92.4 92 52.2
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 4.6e-17 91.3 70 64.3
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 6.0e-17 90.9 94 47.9
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 2.3e-16 89.0 69 63.8
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 3.0e-16 88.6 84 53.6
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 3.9e-16 88.2 123 41.5
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 1.1e-15 86.7 89 50.6
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 1.9e-15 85.9 75 57.3
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 1.9e-15 85.9 95 48.4
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 3.3e-15 85.1 75 53.3
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 4.3e-15 84.7 80 51.2
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 7.4e-15 84.0 95 43.2
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 2.8e-14 82.0 67 56.7
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 4.8e-14 81.3 81 49.4
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 8.1e-14 80.5 94 50.0
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 9.3e-10 67.0 64 56.2
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 2.1e-09 65.9 95 42.1
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 2.7e-09 65.5 50 64.0
Lj1A1236G69 Lonicera japonica HOM05D000015 ORTHO05D009146 2.8e-06 55.5 108 35.2


User provided reference genes

Program Settings