Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49369 Brassica carinata HOM05D007475 ORTHO05D009529 3.7e-55 218.0 113 100.0
BcaC09g50609 Brassica carinata HOM05D007475 ORTHO05D009529 3.7e-55 218.0 113 100.0
BcaC09g50612 Brassica carinata HOM05D007475 ORTHO05D009529 3.7e-55 218.0 113 100.0
C01p23280 Brassica napus HOM05D007475 ORTHO05D009529 3.7e-55 218.0 113 100.0
C01p37410 Brassica napus HOM05D007475 ORTHO05D009529 3.7e-55 218.0 113 100.0
BolC1t03708H Brassica oleracea HOM05D007475 ORTHO05D009529 3.7e-55 218.0 113 100.0
A01p18280 Brassica napus HOM05D007475 ORTHO05D009529 1.1e-54 216.5 113 99.1
BcaC09g50606 Brassica carinata HOM05D007475 ORTHO05D009529 3.2e-51 204.9 116 93.1
A01p18330 Brassica napus HOM05D007475 ORTHO05D009529 3.2e-51 204.9 116 93.1
BraA01t01783Z Brassica rapa HOM05D007475 ORTHO05D009529 3.2e-51 204.9 116 93.1
BraA01t01785Z Brassica rapa HOM05D007475 ORTHO05D009529 3.2e-51 204.9 116 93.1
A01p18300 Brassica napus HOM05D007475 ORTHO05D009529 9.4e-51 203.4 113 91.2
A01p18310 Brassica napus HOM05D007475 ORTHO05D009529 9.4e-51 203.4 113 91.2
BraA01t01782Z Brassica rapa HOM05D007475 ORTHO05D009529 9.4e-51 203.4 113 91.2
BraA01t01784Z Brassica rapa HOM05D007475 ORTHO05D009529 9.4e-51 203.4 113 91.2
BcaC09g50610 Brassica carinata HOM05D007475 ORTHO05D009529 8.0e-50 200.3 113 90.3
BolC1t02261H Brassica oleracea HOM05D007475 ORTHO05D009529 1.0e-49 199.9 112 90.2
A01p18340 Brassica napus HOM05D007475 ORTHO05D009529 1.8e-49 199.1 115 90.4
BraA01t01786Z Brassica rapa HOM05D007475 ORTHO05D009529 5.2e-49 197.6 113 90.3
A01p20870 Brassica napus HOM05D007475 ORTHO05D009529 6.7e-49 197.2 113 92.0
BraA01t02006Z Brassica rapa HOM05D007475 ORTHO05D009529 6.7e-49 197.2 113 92.0
BcaC09g50364 Brassica carinata HOM05D007475 ORTHO05D009529 2.0e-48 195.7 113 91.2
C01p26200 Brassica napus HOM05D007475 ORTHO05D009529 2.0e-48 195.7 113 91.2
BolC1t02563H Brassica oleracea HOM05D007475 ORTHO05D009529 2.0e-48 195.7 113 91.2
C01p23300 Brassica napus HOM05D007475 ORTHO05D009529 7.5e-48 193.7 116 87.1
BolC1t02264H Brassica oleracea HOM05D007475 ORTHO05D009529 7.5e-48 193.7 116 87.1
BolC1t02266H Brassica oleracea HOM05D007475 ORTHO05D009529 7.5e-48 193.7 116 87.1
BcaNung00178 Brassica carinata HOM05D007475 ORTHO05D009529 2.2e-47 192.2 113 89.4
BcaNung00179 Brassica carinata HOM05D007475 ORTHO05D009529 2.2e-47 192.2 113 89.4
BcaNung03055 Brassica carinata HOM05D007475 ORTHO05D009529 4.8e-47 191.0 116 87.1
C01p23290 Brassica napus HOM05D007475 ORTHO05D009529 2.7e-45 185.3 113 83.2
BolC1t02262H Brassica oleracea HOM05D007475 ORTHO05D009529 7.7e-45 183.7 113 82.3
BcaB01g05180 Brassica carinata HOM05D007475 ORTHO05D009529 1.0e-44 183.3 112 87.5
C03p10150 Brassica napus HOM05D007475 ORTHO05D009529 1.0e-44 183.3 112 87.5
BolC3t13500H Brassica oleracea HOM05D007475 ORTHO05D009529 1.0e-44 183.3 112 87.5
BraA03t10193Z Brassica rapa HOM05D007475 ORTHO05D009529 1.0e-44 183.3 112 87.5
BcaNung03058 Brassica carinata HOM05D007475 ORTHO05D009529 1.7e-44 182.6 115 83.5
BcaNung03054 Brassica carinata HOM05D007475 ORTHO05D009529 6.5e-44 180.6 115 81.7
BcaC09g50602 Brassica carinata HOM05D007475 ORTHO05D009529 1.9e-43 179.1 115 85.2
BcaB03g12530 Brassica carinata HOM05D007475 ORTHO05D009529 1.2e-32 143.3 112 65.2
A03p57110 Brassica napus HOM05D007475 ORTHO05D009529 5.7e-32 141.0 108 66.7
Thhalv10026791m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 2.3e-28 129.0 112 63.4
A03p08700 Brassica napus HOM05D007475 ORTHO05D009529 2.9e-28 128.6 66 93.9
BcaC07g38274 Brassica carinata HOM05D007475 ORTHO05D009529 2.0e-24 115.9 111 54.1
C08p10230 Brassica napus HOM05D007475 ORTHO05D009529 2.0e-24 115.9 111 54.1
AL7G25660 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 2.6e-24 115.5 99 60.6
BcaNung00181 Brassica carinata HOM05D007475 ORTHO05D009529 3.4e-24 115.2 113 57.5
A08p20510 Brassica napus HOM05D007475 ORTHO05D009529 5.7e-24 114.4 111 54.1
BraA08t34007Z Brassica rapa HOM05D007475 ORTHO05D009529 5.7e-24 114.4 111 54.1
AL7G25650 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 9.8e-24 113.6 97 59.8
AT4G27140 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 1.3e-23 113.2 90 63.3
AL7G25640 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 2.9e-23 112.1 95 60.0
AT4G27150 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 1.8e-22 109.4 108 50.9
Carub.0007s1368 Capsella rubella HOM05D007475 ORTHO05D009529 2.4e-22 109.0 112 52.7
CARHR058020 Cardamine hirsuta HOM05D007475 ORTHO05D009529 7.0e-22 107.5 115 53.9
AT4G27170 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 4.6e-21 104.8 110 54.5
CARHR289420 Cardamine hirsuta HOM05D007475 ORTHO05D009529 1.3e-20 103.2 104 53.8
Carub.0007s1369 Capsella rubella HOM05D007475 ORTHO05D009529 3.0e-20 102.1 112 53.6
Carub.0007s1367 Capsella rubella HOM05D007475 ORTHO05D009529 1.9e-19 99.4 112 51.8
AT4G27160 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 2.8e-18 95.5 108 49.1
Carub.0007s1370 Capsella rubella HOM05D007475 ORTHO05D009529 6.2e-18 94.4 92 50.0
BraA03t14781Z Brassica rapa HOM05D007475 ORTHO05D009529 3.1e-17 92.0 111 47.7
Carub.0008s0615 Capsella rubella HOM05D007475 ORTHO05D009529 3.1e-17 92.0 89 52.8
CARHR289410 Cardamine hirsuta HOM05D007475 ORTHO05D009529 8.9e-17 90.5 104 51.0
BolC8t48701H Brassica oleracea HOM05D007475 ORTHO05D009529 3.4e-16 88.6 94 51.1
Aa31LG5G10270 Aethionema arabicum HOM05D007475 ORTHO05D009529 1.7e-15 86.3 103 45.6
Aa31LG5G10280 Aethionema arabicum HOM05D007475 ORTHO05D009529 3.2e-14 82.0 93 44.1
Sp7g25120 Schrenkiella parvula HOM05D007475 ORTHO05D009529 3.2e-14 82.0 112 50.0
A03p57140 Brassica napus HOM05D007475 ORTHO05D009529 1.6e-13 79.7 82 48.8
C07p55330 Brassica napus HOM05D007475 ORTHO05D009529 1.6e-13 79.7 82 48.8
BolC7t46014H Brassica oleracea HOM05D007475 ORTHO05D009529 1.6e-13 79.7 82 48.8
AL8G30160 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 2.0e-13 79.3 91 47.3
BcaC06g32708 Brassica carinata HOM05D007475 ORTHO05D009529 1.3e-12 76.6 82 50.0
CARHR234800 Cardamine hirsuta HOM05D007475 ORTHO05D009529 1.3e-12 76.6 63 66.7
AT5G54740 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 1.9e-11 72.8 91 45.1
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 9.5e-11 70.5 102 41.2
Sp6g16690 Schrenkiella parvula HOM05D007475 ORTHO05D009529 3.6e-10 68.6 88 42.0
THA.LOC104817655 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.8e-09 66.2 78 42.3
Thhalv10015934m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 2.3e-09 65.9 96 41.7
THA.LOC104809798 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.3e-09 65.9 89 41.6
THA.LOC104817656 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.3e-09 65.9 89 41.6
THA.LOC104822214 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.3e-09 65.9 89 41.6
THA.LOC104822215 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.3e-09 65.9 89 41.6
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 4.0e-09 65.1 92 39.1
Aa31LG3G10660 Aethionema arabicum HOM05D007475 ORTHO05D009529 5.2e-09 64.7 93 41.9
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 8.9e-09 63.9 102 39.2
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.5e-08 63.2 95 38.9
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.7e-07 58.5 89 38.2


User provided reference genes

Program Settings