Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g50606 Brassica carinata HOM05D007475 ORTHO05D009529 1.4e-96 356.3 184 100.0
A01p18330 Brassica napus HOM05D007475 ORTHO05D009529 5.0e-94 347.8 184 98.9
BraA01t01783Z Brassica rapa HOM05D007475 ORTHO05D009529 5.0e-94 347.8 184 98.9
BraA01t01785Z Brassica rapa HOM05D007475 ORTHO05D009529 5.0e-94 347.8 184 98.9
A01p18280 Brassica napus HOM05D007475 ORTHO05D009529 4.7e-92 341.3 184 94.0
BcaC09g49369 Brassica carinata HOM05D007475 ORTHO05D009529 1.2e-90 336.7 184 93.5
BcaC09g50609 Brassica carinata HOM05D007475 ORTHO05D009529 1.2e-90 336.7 184 93.5
C01p23280 Brassica napus HOM05D007475 ORTHO05D009529 1.2e-90 336.7 184 93.5
C01p37410 Brassica napus HOM05D007475 ORTHO05D009529 1.2e-90 336.7 184 93.5
BolC1t03708H Brassica oleracea HOM05D007475 ORTHO05D009529 1.2e-90 336.7 184 93.5
C01p23300 Brassica napus HOM05D007475 ORTHO05D009529 1.3e-89 333.2 184 92.4
BolC1t02264H Brassica oleracea HOM05D007475 ORTHO05D009529 1.3e-89 333.2 184 90.8
A01p18300 Brassica napus HOM05D007475 ORTHO05D009529 1.7e-89 332.8 184 91.8
BraA01t01786Z Brassica rapa HOM05D007475 ORTHO05D009529 2.9e-89 332.0 184 92.4
BolC1t02266H Brassica oleracea HOM05D007475 ORTHO05D009529 3.7e-89 331.6 184 90.2
BraA01t01784Z Brassica rapa HOM05D007475 ORTHO05D009529 6.4e-89 330.9 184 91.3
A01p20870 Brassica napus HOM05D007475 ORTHO05D009529 1.9e-88 329.3 184 92.4
BraA01t02006Z Brassica rapa HOM05D007475 ORTHO05D009529 1.9e-88 329.3 184 92.4
BcaC09g50364 Brassica carinata HOM05D007475 ORTHO05D009529 3.2e-88 328.6 184 92.4
A01p18340 Brassica napus HOM05D007475 ORTHO05D009529 4.1e-88 328.2 184 94.0
BolC1t02261H Brassica oleracea HOM05D007475 ORTHO05D009529 1.2e-87 326.6 184 90.2
A01p18310 Brassica napus HOM05D007475 ORTHO05D009529 1.6e-87 326.2 184 91.8
BolC1t02563H Brassica oleracea HOM05D007475 ORTHO05D009529 2.7e-87 325.5 184 91.8
C01p26200 Brassica napus HOM05D007475 ORTHO05D009529 1.0e-86 323.6 184 91.3
BcaNung03055 Brassica carinata HOM05D007475 ORTHO05D009529 1.1e-85 320.1 185 89.2
BcaNung00178 Brassica carinata HOM05D007475 ORTHO05D009529 3.3e-85 318.5 184 89.1
BcaNung00179 Brassica carinata HOM05D007475 ORTHO05D009529 3.3e-85 318.5 184 89.1
BraA01t01782Z Brassica rapa HOM05D007475 ORTHO05D009529 3.3e-85 318.5 209 80.4
BcaC09g50602 Brassica carinata HOM05D007475 ORTHO05D009529 1.6e-84 316.2 184 91.8
C01p23290 Brassica napus HOM05D007475 ORTHO05D009529 2.1e-84 315.8 184 86.4
BolC1t02262H Brassica oleracea HOM05D007475 ORTHO05D009529 2.1e-84 315.8 184 86.4
BcaB01g05180 Brassica carinata HOM05D007475 ORTHO05D009529 1.2e-82 310.1 186 89.2
C03p10150 Brassica napus HOM05D007475 ORTHO05D009529 1.2e-82 310.1 186 89.2
BolC3t13500H Brassica oleracea HOM05D007475 ORTHO05D009529 1.2e-82 310.1 186 89.2
BraA03t10193Z Brassica rapa HOM05D007475 ORTHO05D009529 1.2e-82 310.1 186 89.2
BcaNung03058 Brassica carinata HOM05D007475 ORTHO05D009529 1.9e-80 302.8 199 78.9
BcaNung03054 Brassica carinata HOM05D007475 ORTHO05D009529 1.0e-78 297.0 199 76.4
A03p08700 Brassica napus HOM05D007475 ORTHO05D009529 6.2e-68 261.2 140 92.9
A03p57110 Brassica napus HOM05D007475 ORTHO05D009529 4.6e-63 245.0 180 68.9
BcaB03g12530 Brassica carinata HOM05D007475 ORTHO05D009529 9.6e-61 237.3 186 66.7
Thhalv10026791m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 2.9e-57 225.7 187 65.2
BcaC07g38274 Brassica carinata HOM05D007475 ORTHO05D009529 1.6e-52 209.9 183 58.5
C08p10230 Brassica napus HOM05D007475 ORTHO05D009529 1.6e-52 209.9 183 58.5
BraA08t34007Z Brassica rapa HOM05D007475 ORTHO05D009529 6.2e-52 208.0 183 58.5
BcaC09g50612 Brassica carinata HOM05D007475 ORTHO05D009529 8.1e-52 207.6 116 93.1
Carub.0007s1368 Capsella rubella HOM05D007475 ORTHO05D009529 9.0e-51 204.1 185 59.5
AL7G25640 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 1.5e-50 203.4 179 62.0
AL7G25650 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 1.5e-50 203.4 179 61.5
AL7G25660 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 1.5e-50 203.4 183 59.0
BraA03t14781Z Brassica rapa HOM05D007475 ORTHO05D009529 1.7e-49 199.9 183 60.1
AT4G27140 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 2.2e-49 199.5 174 61.5
A08p20510 Brassica napus HOM05D007475 ORTHO05D009529 2.2e-49 199.5 183 57.4
BcaC09g50610 Brassica carinata HOM05D007475 ORTHO05D009529 6.4e-49 198.0 116 88.8
AT4G27150 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 7.1e-48 194.5 180 58.9
AT4G27170 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 2.7e-47 192.6 185 58.4
CARHR058020 Cardamine hirsuta HOM05D007475 ORTHO05D009529 1.0e-46 190.7 189 58.2
CARHR289420 Cardamine hirsuta HOM05D007475 ORTHO05D009529 2.3e-46 189.5 178 58.4
AT4G27160 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 1.5e-45 186.8 180 58.3
Carub.0007s1369 Capsella rubella HOM05D007475 ORTHO05D009529 4.3e-45 185.3 183 59.0
Carub.0007s1367 Capsella rubella HOM05D007475 ORTHO05D009529 3.7e-44 182.2 183 55.7
Carub.0007s1370 Capsella rubella HOM05D007475 ORTHO05D009529 1.5e-42 176.8 175 54.3
CARHR289410 Cardamine hirsuta HOM05D007475 ORTHO05D009529 1.0e-41 174.1 176 55.7
Carub.0008s0615 Capsella rubella HOM05D007475 ORTHO05D009529 8.4e-41 171.0 175 54.3
A03p57140 Brassica napus HOM05D007475 ORTHO05D009529 9.3e-40 167.5 175 54.3
Aa31LG5G10270 Aethionema arabicum HOM05D007475 ORTHO05D009529 1.6e-39 166.8 184 50.0
C07p55330 Brassica napus HOM05D007475 ORTHO05D009529 2.7e-39 166.0 175 53.7
BolC7t46014H Brassica oleracea HOM05D007475 ORTHO05D009529 2.7e-39 166.0 175 53.7
Sp7g25120 Schrenkiella parvula HOM05D007475 ORTHO05D009529 4.6e-39 165.2 183 56.8
CARHR234800 Cardamine hirsuta HOM05D007475 ORTHO05D009529 5.1e-38 161.8 134 66.4
Aa31LG5G10280 Aethionema arabicum HOM05D007475 ORTHO05D009529 7.4e-37 157.9 176 48.3
BcaC06g32708 Brassica carinata HOM05D007475 ORTHO05D009529 9.0e-35 151.0 175 52.0
AL8G30160 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 4.6e-31 138.7 176 48.3
AT5G54740 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 8.7e-30 134.4 176 47.2
Sp6g16690 Schrenkiella parvula HOM05D007475 ORTHO05D009529 3.3e-29 132.5 178 46.6
Thhalv10015934m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 3.7e-28 129.0 175 45.1
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 4.8e-28 128.6 177 44.6
Aa31LG3G10660 Aethionema arabicum HOM05D007475 ORTHO05D009529 1.1e-27 127.5 175 43.4
BcaC09g50613 Brassica carinata HOM05D007475 ORTHO05D009529 2.2e-25 119.8 62 93.5
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 6.5e-25 118.2 175 42.9
THA.LOC104817656 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.1e-24 117.5 174 42.5
THA.LOC104822214 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.1e-24 117.5 174 42.5
THA.LOC104822215 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.1e-24 117.5 174 42.5
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.4e-24 117.1 175 40.6
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 5.5e-24 115.2 177 41.2
BcaC09g50611 Brassica carinata HOM05D007475 ORTHO05D009529 7.2e-24 114.8 62 90.3
BcaNung00181 Brassica carinata HOM05D007475 ORTHO05D009529 9.4e-24 114.4 116 54.3
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.3e-22 109.8 175 41.1
BcaB08g35832 Brassica carinata HOM05D007475 ORTHO05D009529 7.4e-21 104.8 137 49.6
THA.LOC104817655 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.7e-20 103.6 174 39.1
Sp7g25110 Schrenkiella parvula HOM05D007475 ORTHO05D009529 5.9e-18 95.1 75 64.0
BolC8t48701H Brassica oleracea HOM05D007475 ORTHO05D009529 2.5e-16 89.7 100 48.0
Cpa.g.sc10.244 Carica papaya HOM05D007475 ORTHO05D009529 3.6e-15 85.9 174 33.9
THA.LOC104809798 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 4.7e-15 85.5 134 38.8
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 2.0e-13 80.1 172 33.1
Cpa.g.sc10.251 Carica papaya HOM05D007475 ORTHO05D009529 1.1e-11 74.3 174 30.5
Cpa.g.sc10.239 Carica papaya HOM05D007475 ORTHO05D009529 1.4e-11 73.9 174 30.5
Cpa.g.sc10.243 Carica papaya HOM05D007475 ORTHO05D009529 1.8e-11 73.6 174 35.1
Cpa.g.sc10.249 Carica papaya HOM05D007475 ORTHO05D009529 2.4e-11 73.2 174 29.9
Ciclev10009789m.g Citrus clementina HOM05D007475 ORTHO05D009529 3.1e-11 72.8 177 29.4
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 4.5e-10 68.9 171 28.7
Cpa.g.sc97.59 Carica papaya HOM05D007475 ORTHO05D009529 2.2e-09 66.6 173 31.2
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 1.6e-07 60.5 163 30.7
Manes.15G075900 Manihot esculenta HOM05D007475 ORTHO05D005877 6.1e-07 58.5 166 27.7
HanXRQChr11g0332911 Helianthus annuus HOM05D009374 ORTHO05D012864 3.0e-06 56.2 162 32.1
Sopen08g028810 Solanum pennellii HOM05D006536 ORTHO05D005877 4.0e-06 55.8 135 31.1


User provided reference genes

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