Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g50569 Brassica carinata HOM05D000978 ORTHO05D000813 4.5e-58 227.6 108 100.0
A04p24100 Brassica napus HOM05D000978 ORTHO05D000813 4.2e-16 88.2 64 67.2
BcaB06g28524 Brassica carinata HOM05D000978 ORTHO05D000813 7.2e-16 87.4 62 69.4
C04p60810 Brassica napus HOM05D000978 ORTHO05D000813 7.2e-16 87.4 62 69.4
BolC4t27572H Brassica oleracea HOM05D000978 ORTHO05D000813 7.2e-16 87.4 62 69.4
BraA04t17930Z Brassica rapa HOM05D000978 ORTHO05D000813 7.2e-16 87.4 61 72.1
BcaB06g28443 Brassica carinata HOM05D000978 ORTHO05D000813 1.6e-15 86.3 60 71.7
Sp4g13760 Schrenkiella parvula HOM05D000978 ORTHO05D000813 1.0e-14 83.6 60 68.3
Thhalv10016331m.g Eutrema salsugineum HOM05D000978 ORTHO05D000813 1.4e-11 73.2 63 61.9
CiPaw.03G261800 Carya illinoinensis HOM05D000978 ORTHO05D000813 1.2e-10 70.1 63 58.7
Aa31LG5G5670 Aethionema arabicum HOM05D000978 ORTHO05D000813 2.6e-10 68.9 63 60.3
Haze_24600 Corylus avellana HOM05D000978 ORTHO05D000813 4.5e-10 68.2 63 58.7
A05p14490 Brassica napus HOM05D000978 ORTHO05D000813 1.0e-09 67.0 60 58.3
BraA05t20380Z Brassica rapa HOM05D000978 ORTHO05D000813 3.8e-09 65.1 58 56.9
GSVIVG01028300001 Vitis vinifera HOM05D000978 ORTHO05D000813 5.0e-09 64.7 63 57.1
Carub.0004s1257 Capsella rubella HOM05D000978 ORTHO05D000813 8.5e-09 63.9 58 56.9
Gohir.A07G211500 Gossypium hirsutum HOM05D000978 ORTHO05D000813 3.2e-08 62.0 63 54.0
CARHR124870 Cardamine hirsuta HOM05D000978 ORTHO05D000813 4.2e-08 61.6 60 56.7
C04p19320 Brassica napus HOM05D000978 ORTHO05D000813 5.5e-08 61.2 58 53.4
BolC4t23465H Brassica oleracea HOM05D000978 ORTHO05D000813 5.5e-08 61.2 58 53.4
Gohir.D07G217700 Gossypium hirsutum HOM05D000978 ORTHO05D000813 9.4e-08 60.5 63 52.4
Gorai.001G251900 Gossypium raimondii HOM05D000978 ORTHO05D000813 9.4e-08 60.5 63 52.4
Potri.002G040600 Populus trichocarpa HOM05D000978 ORTHO05D000813 9.4e-08 60.5 63 52.4
THA.LOC104815852 Tarenaya hassleriana HOM05D000978 ORTHO05D009488 1.2e-07 60.1 62 56.5
BcaC02g11200 Brassica carinata HOM05D000978 ORTHO05D000813 2.1e-07 59.3 57 52.6
Ciclev10018993m.g Citrus clementina HOM05D000978 ORTHO05D000813 2.7e-07 58.9 63 52.4
Potri.005G222500 Populus trichocarpa HOM05D000978 ORTHO05D000813 2.7e-07 58.9 63 50.8
Prupe.8G225900 Prunus persica HOM05D000978 ORTHO05D000813 3.6e-07 58.5 63 52.4
AT2G31280 Arabidopsis thaliana HOM05D000978 ORTHO05D000813 4.7e-07 58.2 60 55.0
Sabra02G0032300 Salix brachista HOM05D000978 ORTHO05D000813 4.7e-07 58.2 63 50.8
BcaB06g28442 Brassica carinata HOM05D013645 ORTHO05D015919 6.1e-07 57.8 39 71.8
Duzib138G0712 Durio zibethinus HOM05D000978 ORTHO05D000813 8.0e-07 57.4 63 50.8
QL09p038079 Quercus lobata HOM05D000978 ORTHO05D000813 8.0e-07 57.4 64 53.1
Thecc.01G261200 Theobroma cacao HOM05D000978 ORTHO05D000813 8.0e-07 57.4 63 50.8
Duzib133G1328 Durio zibethinus HOM05D000978 ORTHO05D000813 1.0e-06 57.0 63 49.2
BcaB02g10367 Brassica carinata HOM05D000978 ORTHO05D000813 1.4e-06 56.6 60 51.7
Hma1.2p1_0273F.1_g109880 Hydrangea macrophylla HOM05D000978 ORTHO05D000813 1.8e-06 56.2 63 50.8
RcHm_v2.0_Chr6g0288541 Rosa chinensis HOM05D000978 ORTHO05D000813 2.3e-06 55.8 63 49.2
THA.LOC104800877 Tarenaya hassleriana HOM05D000978 ORTHO05D000813 4.0e-06 55.1 63 49.2
Sabra05G0171200 Salix brachista HOM05D000978 ORTHO05D000813 5.2e-06 54.7 63 49.2
TWI12G0684 Tripterygium wilfordii HOM05D000978 ORTHO05D000813 5.2e-06 54.7 63 49.2
CsaV3_7G027460 Cucumis sativus L. HOM05D000978 ORTHO05D000813 6.7e-06 54.3 63 50.8
AL4G26510 Arabidopsis lyrata HOM05D000978 ORTHO05D000813 8.8e-06 53.9 60 51.7
ClCG09G007670 Citrullus lanatus HOM05D000978 ORTHO05D000813 8.8e-06 53.9 63 50.8


User provided reference genes

Program Settings