Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g50559 Brassica carinata HOM05D001851 ORTHO05D031839 3.3e-43 177.9 88 100.0
BraA01t01843Z Brassica rapa HOM05D001851 ORTHO05D031839 2.7e-21 105.1 77 70.1
A01p19000 Brassica napus HOM05D001851 ORTHO05D031839 3.5e-21 104.8 77 70.1
BNapus_Darmor_BZH_scaffold_78p01020 Brassica napus HOM05D001851 ORTHO05D002237 2.2e-07 58.9 81 48.1
BraA01t04503Z Brassica rapa HOM05D001851 ORTHO05D002237 2.2e-07 58.9 81 48.1
BcaNung06426 Brassica carinata HOM05D001851 ORTHO05D002237 5.0e-07 57.8 81 46.9
BolC1t05725H Brassica oleracea HOM05D001851 ORTHO05D002237 5.0e-07 57.8 81 46.9
BcaB04g19292 Brassica carinata HOM05D001851 ORTHO05D002237 8.5e-07 57.0 82 46.3
BcaB04g21345 Brassica carinata HOM05D001851 ORTHO05D002237 8.5e-07 57.0 82 46.3
BcaNung06424 Brassica carinata HOM05D001851 ORTHO05D002237 8.5e-07 57.0 82 46.3
A03p33870 Brassica napus HOM05D001851 ORTHO05D002237 8.5e-07 57.0 82 46.3
A05p42750 Brassica napus HOM05D001851 ORTHO05D002237 8.5e-07 57.0 82 46.3
C05p62470 Brassica napus HOM05D001851 ORTHO05D002237 8.5e-07 57.0 82 46.3
BolC3t16407H Brassica oleracea HOM05D001851 ORTHO05D002237 8.5e-07 57.0 82 46.3
BolC5t34900H Brassica oleracea HOM05D001851 ORTHO05D002237 8.5e-07 57.0 82 46.3
BraA03t12561Z Brassica rapa HOM05D001851 ORTHO05D002237 8.5e-07 57.0 82 46.3
BraA05t22978Z Brassica rapa HOM05D001851 ORTHO05D002237 8.5e-07 57.0 82 46.3
AT4G34670 Arabidopsis thaliana HOM05D001851 ORTHO05D002237 1.9e-06 55.8 82 45.1
C03p41210 Brassica napus HOM05D001851 ORTHO05D002237 1.9e-06 55.8 82 45.1
AL3G15000 Arabidopsis lyrata HOM05D001851 ORTHO05D002237 2.5e-06 55.5 82 45.1
C03p85600 Brassica napus HOM05D001851 ORTHO05D002237 2.5e-06 55.5 74 45.9
BolC3t20848H Brassica oleracea HOM05D001851 ORTHO05D002237 2.5e-06 55.5 74 45.9
Carub.0003s0403 Capsella rubella HOM05D001851 ORTHO05D002237 4.2e-06 54.7 81 45.7
AL7G16530 Arabidopsis lyrata HOM05D001851 ORTHO05D002237 5.5e-06 54.3 82 43.9
Thhalv10021341m.g Eutrema salsugineum HOM05D001851 ORTHO05D002237 5.5e-06 54.3 82 43.9
AT3G04840 Arabidopsis thaliana HOM05D001851 ORTHO05D002237 7.2e-06 53.9 82 43.9
BcaC01g00885 Brassica carinata HOM05D001851 ORTHO05D002237 9.4e-06 53.5 81 44.4
A08p16680 Brassica napus HOM05D001851 ORTHO05D002237 9.4e-06 53.5 81 44.4
BraA08t33633Z Brassica rapa HOM05D001851 ORTHO05D002237 9.4e-06 53.5 81 44.4


User provided reference genes

Program Settings