Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g50518 Brassica carinata HOM05D005733 ORTHO05D007442 2.0e-172 609.0 304 100.0
C07p55880 Brassica napus HOM05D005733 ORTHO05D007442 1.6e-57 227.3 190 66.3
A03p57670 Brassica napus HOM05D005733 ORTHO05D007442 2.8e-57 226.5 190 65.8
BraA03t14833Z Brassica rapa HOM05D005733 ORTHO05D007442 2.8e-57 226.5 190 65.8
BcaC06g32650 Brassica carinata HOM05D005733 ORTHO05D007442 3.6e-57 226.1 190 66.3
Thhalv10025984m.g Eutrema salsugineum HOM05D005733 ORTHO05D007442 3.6e-57 226.1 190 65.8
CARHR235730 Cardamine hirsuta HOM05D005733 ORTHO05D007442 1.2e-55 221.1 190 64.7
AT4G28030 Arabidopsis thaliana HOM05D005733 ORTHO05D007442 3.4e-55 219.5 225 56.9
Sp7g25980 Schrenkiella parvula HOM05D005733 ORTHO05D007442 4.5e-55 219.2 190 64.7
AL7G24580 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 5.8e-55 218.8 225 56.9
Carub.0007s1276 Capsella rubella HOM05D005733 ORTHO05D007442 4.9e-54 215.7 190 62.1
Aa31LG7G2230 Aethionema arabicum HOM05D005733 ORTHO05D007442 1.8e-51 207.2 226 53.5
THA.LOC104811821 Tarenaya hassleriana HOM05D005733 ORTHO05D007442 3.9e-51 206.1 190 62.1
arahy.Tifrunner.gnm1.ann1.0JVE27 Arachis hypogaea HOM05D005733 ORTHO05D007442 7.9e-44 181.8 191 53.4
arahy.Tifrunner.gnm1.ann1.GE8FUD Arachis hypogaea HOM05D005733 ORTHO05D007442 1.3e-43 181.0 191 53.4
Duzib187G0641 Durio zibethinus HOM05D005733 ORTHO05D007442 1.3e-43 181.0 190 53.2
Thecc.09G161700 Theobroma cacao HOM05D005733 ORTHO05D007442 1.8e-43 180.6 190 54.7
Eucgr.C01245 Eucalyptus grandis HOM05D005733 ORTHO05D007442 2.3e-43 180.3 201 49.3
Glyma.13G091800 Glycine max HOM05D005733 ORTHO05D007442 6.7e-43 178.7 190 53.7
COL.COLO4_27474 Corchorus olitorius HOM05D005733 ORTHO05D007442 1.5e-42 177.6 190 51.6
TWI63G0727 Tripterygium wilfordii HOM05D005733 ORTHO05D007442 1.9e-42 177.2 190 53.7
Cfa013546 Carpinus fangiana HOM05D005733 ORTHO05D007442 4.3e-42 176.0 186 54.8
Aa31sc193G30 Aethionema arabicum HOM05D005733 ORTHO05D007442 9.6e-42 174.9 152 61.8
Glyma.17G068500 Glycine max HOM05D005733 ORTHO05D007442 2.1e-41 173.7 190 52.6
Gorai.004G103800 Gossypium raimondii HOM05D005733 ORTHO05D007442 1.1e-40 171.4 190 51.1
Lj4g0011389 Lotus japonicus HOM05D005733 ORTHO05D007442 1.1e-40 171.4 193 51.3
Atru.chr7.506 Acer truncatum HOM05D005733 ORTHO05D007442 1.8e-40 170.6 191 52.9
Sabra06G0134700 Salix brachista HOM05D005733 ORTHO05D007442 1.8e-40 170.6 190 49.5
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 2.4e-40 170.2 311 42.4
Ca_21184_v3 Cicer arietinum L. HOM05D005733 ORTHO05D007442 5.3e-40 169.1 190 50.0
Potri.006G176500 Populus trichocarpa HOM05D005733 ORTHO05D007442 5.3e-40 169.1 190 49.5
TPR.G5298 Trifolium pratense HOM05D005733 ORTHO05D007442 5.3e-40 169.1 203 48.8
VMungo1215G3105 Vigna mungo HOM05D005733 ORTHO05D007442 6.9e-40 168.7 190 50.5
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 9.0e-40 168.3 311 42.4
Psat4g010480 Pisum sativum HOM05D005733 ORTHO05D007442 1.2e-39 167.9 190 50.0
RcHm_v2.0_Chr4g0404931 Rosa chinensis HOM05D005733 ORTHO05D007442 1.2e-39 167.9 188 50.0
Phvul.003G151100 Phaseolus vulgaris HOM05D005733 ORTHO05D007442 2.0e-39 167.2 190 51.1
FAN17G0482 Fragaria x ananassa HOM05D005733 ORTHO05D007442 3.4e-39 166.4 192 48.4
CiPaw.07G186800 Carya illinoinensis HOM05D005733 ORTHO05D007442 5.8e-39 165.6 196 50.0
MD16G1262600 Malus domestica HOM05D005733 ORTHO05D007442 5.8e-39 165.6 191 49.7
PGR142G3644 Punica granatum HOM05D005733 ORTHO05D007442 5.8e-39 165.6 191 49.2
Medtr4g129490 Medicago truncatula HOM05D005733 ORTHO05D007442 1.7e-38 164.1 190 50.0
GSVIVG01023749001 Vitis vinifera HOM05D005733 ORTHO05D007442 2.2e-38 163.7 189 48.7
Lalb_Chr13g0300531 Lupinus albus HOM05D005733 ORTHO05D007442 3.8e-38 162.9 188 48.4
QL02p095666 Quercus lobata HOM05D005733 ORTHO05D007442 6.5e-38 162.2 186 51.6
Rhsim01G0012100 Rhododendron simsii HOM05D005733 ORTHO05D007442 6.5e-38 162.2 191 49.2
Sc08g0005630 Simmondsia chinensis HOM05D005733 ORTHO05D007442 6.5e-38 162.2 190 51.1
TAR383G0601 Trochodendron aralioides HOM05D005733 ORTHO05D007442 6.5e-38 162.2 188 51.1
Aqoxy7G03235 Aquilegia oxysepala HOM05D005733 ORTHO05D007442 8.4e-38 161.8 190 50.0
CsaV3_7G001070 Cucumis sativus L. HOM05D005733 ORTHO05D007442 8.4e-38 161.8 185 51.9
FvH4_4g23510 Fragaria vesca HOM05D005733 ORTHO05D007442 8.4e-38 161.8 192 48.4
FAN12G3847 Fragaria x ananassa HOM05D005733 ORTHO05D007442 1.4e-37 161.0 192 47.9
Ciclev10010607m.g Citrus clementina HOM05D005733 ORTHO05D007442 1.9e-37 160.6 189 48.7
Sed0012123 Sechium edule HOM05D005733 ORTHO05D007442 3.2e-37 159.8 190 48.4
Cpa.g.sc75.16 Carica papaya HOM05D005733 ORTHO05D007442 4.2e-37 159.5 238 43.7
Hma1.2p1_1531F.1_g289230 Hydrangea macrophylla HOM05D005733 ORTHO05D007442 4.2e-37 159.5 189 49.2
Psat4g048120 Pisum sativum HOM05D005733 ORTHO05D007442 4.2e-37 159.5 180 50.6
MSTRG.19675 Avicennia marina HOM05D005733 ORTHO05D007442 7.2e-37 158.7 189 47.6
EL10Ac8g18867 Beta vulgaris HOM05D005733 ORTHO05D007442 7.2e-37 158.7 190 50.5
CSS0014936 Camellia sinensis var. sinensis HOM05D005733 ORTHO05D007442 7.2e-37 158.7 191 47.6
CANSAT11G0464 Cannabis sativa HOM05D005733 ORTHO05D007442 1.2e-36 157.9 186 50.0
MELO3C013348.2 Cucumis melo HOM05D005733 ORTHO05D007442 1.2e-36 157.9 187 50.8
Lj9A728T23 Lonicera japonica HOM05D005733 ORTHO05D007442 1.2e-36 157.9 184 46.7
Oeu058827.1 Olea europaea HOM05D005733 ORTHO05D007442 2.1e-36 157.1 189 47.6
SalBow6G0174 Salvia bowleyana HOM05D005733 ORTHO05D007442 3.5e-36 156.4 188 47.3
Migut.J01418 Erythranthe guttata HOM05D005733 ORTHO05D007442 6.1e-36 155.6 189 47.6
Actinidia20956 Actinidia chinensis HOM05D005733 ORTHO05D007442 1.8e-35 154.1 190 47.9
PSO063G5638 Papaver somniferum HOM05D005733 ORTHO05D007442 3.9e-35 152.9 186 47.8
Cc06_g14000 Coffea canephora HOM05D005733 ORTHO05D007442 6.7e-35 152.1 204 44.6
PSO782G5004 Papaver somniferum HOM05D005733 ORTHO05D007442 1.5e-34 151.0 187 48.1
Manes.06G030000 Manihot esculenta HOM05D005733 ORTHO05D007442 1.9e-34 150.6 221 43.4
ClCG02G004040 Citrullus lanatus HOM05D005733 ORTHO05D007442 2.5e-34 150.2 221 44.3
DCAR_014719 Daucus carota HOM05D005733 ORTHO05D007442 3.3e-34 149.8 190 47.4
Gohir.A08G096462 Gossypium hirsutum HOM05D005733 ORTHO05D007442 3.3e-34 149.8 160 53.1
Hund08988 Selenicereus undatus HOM05D005733 ORTHO05D007442 5.7e-34 149.1 190 47.4
SGA_v2.0_scaffold66G22515 Striga asiatica HOM05D005733 ORTHO05D007442 1.6e-33 147.5 204 42.6
Lsat_1_v5_gn_8_64360 Lactuca sativa HOM05D005733 ORTHO05D007442 1.1e-32 144.8 189 46.0
MBI14_g08080_MAGBIO Magnolia biondii HOM05D005733 ORTHO05D007442 2.4e-32 143.7 152 50.0
CDE02G3066 Ceratophyllum demersum HOM05D005733 ORTHO05D007442 4.1e-32 142.9 189 47.1
ECA236G1842 Erigeron canadensis HOM05D005733 ORTHO05D007442 5.3e-32 142.5 194 42.8
HanXRQChr10g0284091 Helianthus annuus HOM05D005733 ORTHO05D007442 5.3e-32 142.5 194 44.3
AUR62028411 Chenopodium quinoa HOM05D005733 ORTHO05D007442 6.9e-32 142.1 156 52.6
AL3G40460 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 4.5e-31 139.4 93 76.3
PGSC0003DMG402011224 Solanum tuberosum HOM05D005733 ORTHO05D007442 2.2e-30 137.1 190 43.7
Prupe.1G097300 Prunus persica HOM05D005733 ORTHO05D007442 2.9e-30 136.7 148 53.4
Peaxi162Scf00525g00817 Petunia axillaris HOM05D005733 ORTHO05D007442 3.8e-30 136.3 190 43.2
vmacro13073 Vaccinium macrocarpon HOM05D005733 ORTHO05D007442 3.8e-30 136.3 153 50.3
AUR62039751 Chenopodium quinoa HOM05D005733 ORTHO05D007442 8.5e-30 135.2 156 50.6
Solyc07g006340.3 Solanum lycopersicum HOM05D005733 ORTHO05D007442 1.1e-29 134.8 190 43.7
Sopen07g002430 Solanum pennellii HOM05D005733 ORTHO05D007442 1.1e-29 134.8 190 43.7
CAN.G1870.3 Capsicum annuum HOM05D005733 ORTHO05D007442 2.5e-29 133.7 184 43.5
Nitab4.5_0005985g0010 Nicotiana tabacum HOM05D005733 ORTHO05D007442 4.2e-29 132.9 190 41.1
ATR0580G232 Amborella trichopoda HOM05D005733 ORTHO05D007442 9.4e-29 131.7 152 49.3
HPP92_025686 Vanilla planifolia HOM05D005733 ORTHO05D007442 9.4e-29 131.7 186 42.5
BcaC09g50520 Brassica carinata HOM05D005733 ORTHO05D007442 1.2e-28 131.3 218 42.2
AL1G31260 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 3.0e-27 126.7 87 74.7
AL6G37990 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 3.0e-27 126.7 87 74.7
AL7G30680 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 3.0e-27 126.7 87 74.7
unitig_0.g187 Utricularia gibba HOM05D005733 ORTHO05D007442 5.7e-26 122.5 168 45.2
Zm00001eb412590 Zea mays HOM05D005733 ORTHO05D007442 2.2e-25 120.6 120 50.0
FAN05G3225 Fragaria x ananassa HOM05D005733 ORTHO05D007442 4.8e-25 119.4 155 47.1
FAN05G4341 Fragaria x ananassa HOM05D005733 ORTHO05D007442 4.8e-25 119.4 155 47.1
Haze_22166 Corylus avellana HOM05D005733 ORTHO05D007442 2.4e-24 117.1 107 56.1
Nn4g23704 Nelumbo nucifera HOM05D005733 ORTHO05D007442 1.2e-23 114.8 179 39.7
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 4.5e-23 112.8 246 39.0
Cc00_g30300 Coffea canephora HOM05D005733 ORTHO05D007442 1.0e-22 111.7 118 49.2
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 2.5e-21 107.1 191 42.4
Dinv41304 Davidia involucrata HOM05D005733 ORTHO05D007442 1.8e-19 100.9 120 52.5
C01p24460 Brassica napus HOM05D005733 ORTHO05D007442 2.3e-19 100.5 90 56.7
CDE05G3532 Ceratophyllum demersum HOM05D001854 ORTHO05D001800 5.1e-19 99.4 119 48.7
FAN07G2740 Fragaria x ananassa HOM05D005733 ORTHO05D007442 2.0e-18 97.4 118 45.8
Nitab4.5_0005551g0010 Nicotiana tabacum HOM05D005733 ORTHO05D007442 3.3e-18 96.7 141 42.6
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 1.4e-16 91.3 81 70.4
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 3.1e-16 90.1 65 80.0
C02p34360 Brassica napus HOM05D005733 ORTHO05D007442 4.1e-16 89.7 122 50.0
BolC2t09466H Brassica oleracea HOM05D005733 ORTHO05D007442 7.0e-16 89.0 122 49.2
arahy.Tifrunner.gnm1.ann1.IUS3AS Arachis hypogaea HOM05D005733 ORTHO05D007442 1.2e-15 88.2 74 56.8
Os08g0260000 Oryza sativa ssp. japonica HOM05D005733 ORTHO05D007442 1.2e-15 88.2 112 45.5
AagrBONN_evm.TU.Sc2ySwM_344.3527 Anthoceros agrestis HOM05D005733 ORTHO05D007442 2.0e-15 87.4 233 30.5
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 4.5e-15 86.3 80 63.8
arahy.Tifrunner.gnm1.ann1.65BVJ7 Arachis hypogaea HOM05D005733 ORTHO05D007442 5.9e-15 85.9 86 52.3
Pp3c1_4600 Physcomitrium patens HOM05D005733 ORTHO05D007442 2.2e-14 84.0 134 40.3
Psat4g048000 Pisum sativum HOM05D005733 ORTHO05D007442 2.2e-14 84.0 90 47.8
Hund26406 Selenicereus undatus HOM05D005733 ORTHO05D007442 3.8e-14 83.2 118 40.7
Gohir.D08G097100 Gossypium hirsutum HOM05D005733 ORTHO05D007442 8.5e-14 82.0 77 50.6
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 3.2e-13 80.1 76 64.5
SEGI_16930 Sequoiadendron giganteum HOM05D005733 ORTHO05D007442 5.5e-13 79.3 184 29.3
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 2.1e-12 77.4 67 67.2
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 2.1e-12 77.4 65 69.2
Mapoly0019s0038 Marchantia polymorpha HOM05D005733 ORTHO05D007442 2.1e-12 77.4 162 35.2
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 2.7e-12 77.0 66 66.7
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 3.6e-12 76.6 80 62.5
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 4.7e-12 76.3 65 69.2
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 6.1e-12 75.9 64 70.3
AagrBONN_evm.TU.Sc2ySwM_117.2238 Anthoceros agrestis HOM05D004023 ORTHO05D004681 8.0e-12 75.5 167 34.1
Ah.14g084100 Amaranthus hybridus HOM05D005733 ORTHO05D007442 1.0e-11 75.1 184 31.5
arahy.Tifrunner.gnm1.ann1.RS9BE1 Arachis hypogaea HOM05D004903 ORTHO05D005849 2.3e-11 73.9 58 55.2
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 3.0e-11 73.6 65 66.2
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 1.1e-08 65.1 63 65.1
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 3.1e-08 63.5 78 53.8
Haze_22164 Corylus avellana HOM05D005733 ORTHO05D007442 9.1e-08 62.0 79 51.9
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 1.6e-07 61.2 63 57.1
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 3.5e-07 60.1 92 44.6
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 3.5e-07 60.1 63 57.1
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 5.9e-07 59.3 63 60.3
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 7.7e-07 58.9 63 55.6
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 1.0e-06 58.5 63 55.6
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 1.0e-06 58.5 64 57.8
BolC1t02395H Brassica oleracea HOM05D005733 ORTHO05D007442 1.7e-06 57.8 30 86.7
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 1.7e-06 57.8 63 60.3
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 2.2e-06 57.4 63 57.1
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 2.2e-06 57.4 63 54.0
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 3.8e-06 56.6 59 59.3
arahy.Tifrunner.gnm1.ann1.00M671 Arachis hypogaea HOM05D005733 ORTHO05D007442 5.0e-06 56.2 40 52.5
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 6.5e-06 55.8 63 54.0
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 8.5e-06 55.5 80 46.2
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 8.5e-06 55.5 63 52.4
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 8.5e-06 55.5 63 55.6


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