Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g50509 Brassica carinata HOM05D006722 ORTHO05D007944 1.8e-47 192.2 93 100.0
BolC1t02409H Brassica oleracea HOM05D006722 ORTHO05D007944 1.7e-45 185.7 93 96.8
BraA01t01892Z Brassica rapa HOM05D006722 ORTHO05D007944 2.9e-42 174.9 93 90.3
A01p19570 Brassica napus HOM05D006722 ORTHO05D007944 7.3e-41 170.2 93 89.2
BcaNung01592 Brassica carinata HOM05D006722 ORTHO05D007944 4.4e-38 161.0 94 86.2
Sp7g26110 Schrenkiella parvula HOM05D006722 ORTHO05D007944 4.9e-29 131.0 93 74.2
Thhalv10027152m.g Eutrema salsugineum HOM05D006722 ORTHO05D007944 1.4e-28 129.4 93 68.8
AL7G24440 Arabidopsis lyrata HOM05D006722 ORTHO05D007944 1.7e-26 122.5 93 67.7
BolC7t46077H Brassica oleracea HOM05D006722 ORTHO05D007944 8.6e-26 120.2 92 68.5
A03p57860 Brassica napus HOM05D006722 ORTHO05D007944 3.3e-25 118.2 92 67.4
BraA03t14850Z Brassica rapa HOM05D006722 ORTHO05D007944 3.3e-25 118.2 92 67.4
C07p56000 Brassica napus HOM05D006722 ORTHO05D007944 5.6e-25 117.5 92 67.4
Carub.0007s1261 Capsella rubella HOM05D006722 ORTHO05D007944 1.2e-22 109.8 93 62.4
AT4G28160 Arabidopsis thaliana HOM05D006722 ORTHO05D007944 4.6e-19 97.8 93 60.2
CARHR235870 Cardamine hirsuta HOM05D006722 ORTHO05D007944 8.1e-16 87.0 93 53.8
Thhalv10002109m.g Eutrema salsugineum HOM05D006722 ORTHO05D007944 1.7e-13 79.3 115 41.7
Sp3g34120 Schrenkiella parvula HOM05D006722 ORTHO05D007944 1.7e-13 79.3 119 41.2
BcaC06g32641 Brassica carinata HOM05D006722 ORTHO05D007944 3.8e-13 78.2 67 62.7
AT2G20870 Arabidopsis thaliana HOM05D006722 ORTHO05D007944 4.9e-13 77.8 114 42.1
Carub.0003s3553 Capsella rubella HOM05D006722 ORTHO05D007944 4.9e-13 77.8 115 40.9
BcaB08g34945 Brassica carinata HOM05D006722 ORTHO05D007944 6.4e-13 77.4 119 40.3
Aa31LG8G17780 Aethionema arabicum HOM05D006722 ORTHO05D007944 1.1e-12 76.6 108 46.3
AL3G54120 Arabidopsis lyrata HOM05D006722 ORTHO05D007944 1.4e-12 76.3 114 41.2
BcaC07g41191 Brassica carinata HOM05D006722 ORTHO05D007944 4.2e-12 74.7 119 38.7
C08p41970 Brassica napus HOM05D006722 ORTHO05D007944 4.2e-12 74.7 119 38.7
BolC8t51760H Brassica oleracea HOM05D006722 ORTHO05D007944 4.2e-12 74.7 119 38.7
CARHR111610 Cardamine hirsuta HOM05D006722 ORTHO05D007944 4.2e-12 74.7 117 40.2
A09p58680 Brassica napus HOM05D006722 ORTHO05D007944 7.1e-12 73.9 119 37.8
BraA09t41254Z Brassica rapa HOM05D006722 ORTHO05D007944 7.1e-12 73.9 119 37.8
THA.LOC104824711 Tarenaya hassleriana HOM05D006722 ORTHO05D007944 4.6e-11 71.2 114 38.6


User provided reference genes

Program Settings