Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g50494 Brassica carinata HOM05D005953 ORTHO05D004056 3.0e-27 124.8 80 100.0
A01p19690 Brassica napus HOM05D005953 ORTHO05D004056 3.0e-27 124.8 80 100.0
BraA01t01902Z Brassica rapa HOM05D005953 ORTHO05D004056 3.0e-27 124.8 80 100.0
C01p24770 Brassica napus HOM05D005953 ORTHO05D004056 1.5e-26 122.5 80 90.0
BolC1t02424H Brassica oleracea HOM05D005953 ORTHO05D004056 7.4e-26 120.2 80 87.5
Carub.0007s1247 Capsella rubella HOM05D005953 ORTHO05D004056 9.1e-24 113.2 80 77.5
AT4G28290 Arabidopsis thaliana HOM05D005953 ORTHO05D004056 1.4e-21 105.9 81 84.0
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 1.9e-21 105.5 80 76.2
BcaB03g12563 Brassica carinata HOM05D005953 ORTHO05D004056 4.2e-21 104.4 81 81.5
BcaB03g12564 Brassica carinata HOM05D005953 ORTHO05D004056 4.2e-21 104.4 81 81.5
BcaNung01582 Brassica carinata HOM05D005953 ORTHO05D004056 6.1e-20 100.5 80 86.2
BcaC07g38320 Brassica carinata HOM05D005953 ORTHO05D004056 1.3e-17 92.8 81 70.4
BraA08t33974Z Brassica rapa HOM05D005953 ORTHO05D004056 8.2e-17 90.1 81 69.1
AL7G24310 Arabidopsis lyrata HOM05D005953 ORTHO05D004056 1.1e-16 89.7 81 76.5
Thhalv10026705m.g Eutrema salsugineum HOM05D005953 ORTHO05D004056 5.3e-16 87.4 81 80.2
C08p10750 Brassica napus HOM05D005953 ORTHO05D004056 5.9e-15 84.0 81 64.2
BolC8t48747H Brassica oleracea HOM05D005953 ORTHO05D004056 5.9e-15 84.0 81 64.2
CARHR236000 Cardamine hirsuta HOM05D005953 ORTHO05D004056 6.5e-14 80.5 80 76.2
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 2.4e-08 62.0 81 51.9
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 3.1e-08 61.6 82 48.8
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 5.3e-08 60.8 80 50.0
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 1.2e-07 59.7 80 52.5
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 1.6e-07 59.3 84 51.2
Actinidia11037 Actinidia chinensis HOM05D005953 ORTHO05D004056 2.7e-07 58.5 80 66.2
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 3.5e-07 58.2 82 46.3
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 1.3e-06 56.2 86 52.3
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 1.3e-06 56.2 80 58.8
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 1.7e-06 55.8 85 47.1
DCAR_009746 Daucus carota HOM05D005953 ORTHO05D004056 1.7e-06 55.8 80 40.0
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 1.7e-06 55.8 81 48.1
Lalb_Chr03g0029431 Lupinus albus HOM05D005953 ORTHO05D004056 1.7e-06 55.8 80 51.2
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 1.7e-06 55.8 80 47.5
ATR0304G024 Amborella trichopoda HOM05D005953 ORTHO05D004056 2.9e-06 55.1 80 46.2
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 2.9e-06 55.1 81 49.4
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 2.9e-06 55.1 82 42.7
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 3.8e-06 54.7 80 43.8
DCAR_013006 Daucus carota HOM05D005953 ORTHO05D004056 5.0e-06 54.3 90 42.2
Lalb_Chr14g0366901 Lupinus albus HOM05D005953 ORTHO05D004056 5.0e-06 54.3 84 50.0
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 5.0e-06 54.3 80 43.8
Solyc07g054060.3 Solanum lycopersicum HOM05D005953 ORTHO05D004056 5.0e-06 54.3 83 47.0
Lsat_1_v5_gn_8_134201 Lactuca sativa HOM05D005953 ORTHO05D004056 6.5e-06 53.9 80 46.2
Gohir.A12G241800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 8.5e-06 53.5 80 46.2
PGSC0003DMG400018306 Solanum tuberosum HOM05D005953 ORTHO05D004056 8.5e-06 53.5 83 47.0


User provided reference genes

Program Settings