Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 3.1e-220 768.5 484 100.0
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 2.2e-112 410.2 267 99.3
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-101 374.4 287 86.1
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 1.9e-92 344.0 272 87.9
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 9.5e-92 341.7 274 84.3
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 4.3e-84 316.2 471 58.0
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 1.8e-82 310.8 454 59.9
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 1.4e-79 301.2 459 57.7
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 7.0e-79 298.9 246 79.7
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 7.3e-76 288.9 204 79.9
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 2.8e-75 287.0 195 78.5
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 1.6e-70 271.2 421 60.1
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 6.4e-64 249.2 152 83.6
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 1.9e-63 247.7 145 85.5
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 6.0e-62 242.7 368 54.9
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 4.7e-59 233.0 157 77.1
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 1.4e-58 231.5 191 66.5
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 3.4e-57 226.9 157 75.2
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-56 224.9 160 72.5
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 8.4e-56 222.2 258 60.5
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 1.4e-55 221.5 174 70.1
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 7.1e-55 219.2 195 65.6
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 2.7e-54 217.2 156 72.4
C03p49800 Brassica napus HOM05D004128 ORTHO05D018561 1.1e-50 205.3 320 69.7
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 9.9e-49 198.7 163 63.8
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 1.7e-48 198.0 187 61.5
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 1.7e-48 198.0 177 58.8
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 1.9e-47 194.5 174 63.2
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 2.4e-47 194.1 189 56.1
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 2.4e-47 194.1 197 56.9
C03p82170 Brassica napus HOM05D004128 ORTHO05D024629 3.2e-47 193.7 155 69.7
BolC3t20535H Brassica oleracea HOM05D004128 ORTHO05D024629 3.2e-47 193.7 155 69.7
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 4.2e-47 193.4 177 57.6
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 6.0e-46 189.5 199 62.3
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 7.9e-46 189.1 198 59.6
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 1.0e-45 188.7 177 57.1
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 1.3e-45 188.3 177 56.5
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 5.1e-45 186.4 192 60.4
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 1.9e-44 184.5 193 52.3
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 6.2e-43 179.5 371 39.4
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 1.4e-42 178.3 165 59.4
C02p36290 Brassica napus HOM05D004128 ORTHO05D097649 1.4e-42 178.3 324 60.8
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 4.0e-42 176.8 153 63.4
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 1.5e-41 174.9 370 42.2
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 2.0e-41 174.5 376 41.0
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 2.0e-41 174.5 143 66.4
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 5.8e-41 172.9 143 65.7
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 9.9e-41 172.2 143 65.0
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 1.7e-40 171.4 143 65.0
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 1.1e-39 168.7 154 58.4
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 1.4e-39 168.3 143 65.0
BolC4t25488H Brassica oleracea HOM05D004128 ORTHO05D018561 1.4e-39 168.3 96 90.6
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 3.2e-39 167.2 373 40.5
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 4.2e-39 166.8 166 56.0
BraA09t37797Z Brassica rapa HOM05D004128 ORTHO05D024629 4.2e-39 166.8 145 64.8
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 5.5e-39 166.4 134 61.9
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 2.7e-38 164.1 154 57.1
BcaC06g35461 Brassica carinata HOM05D004128 ORTHO05D018561 6.2e-35 152.9 164 72.0
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 5.8e-33 146.4 116 63.8
BcaC01g04075 Brassica carinata HOM05D004128 ORTHO05D018561 7.6e-33 146.0 78 93.6
BcaC01g00877 Brassica carinata HOM05D004128 ORTHO05D018561 6.5e-32 142.9 98 77.6
C08p39080 Brassica napus HOM05D004128 ORTHO05D018561 1.9e-31 141.4 284 66.9
BcaC04g21799 Brassica carinata HOM05D004128 ORTHO05D018561 3.2e-31 140.6 287 63.4
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 1.5e-28 131.7 138 58.7
C06p23810 Brassica napus HOM05D004128 ORTHO05D013239 1.5e-28 131.7 324 52.5
BcaC07g40907 Brassica carinata HOM05D004128 ORTHO05D008395 4.3e-28 130.2 76 94.7
BcaB04g19552 Brassica carinata HOM05D004128 ORTHO05D008395 8.2e-27 125.9 105 60.0
BcaC04g20235 Brassica carinata HOM05D004128 ORTHO05D018561 6.5e-24 116.3 79 77.2
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 1.4e-23 115.2 197 42.1
A07p17770 Brassica napus HOM05D004128 ORTHO05D008395 1.9e-23 114.8 79 72.2
A10p06920 Brassica napus HOM05D004128 ORTHO05D028143 2.5e-23 114.4 430 43.7
BcaB02g11374 Brassica carinata HOM05D004128 ORTHO05D008395 7.2e-23 112.8 172 42.4
C01p25860 Brassica napus HOM05D002053 ORTHO05D002135 7.2e-23 112.8 56 100.0
BcaC01g01241 Brassica carinata HOM05D004128 ORTHO05D092402 9.4e-23 112.5 330 44.2
Sp6g09630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 1.8e-21 108.2 173 37.6
BNapus_Darmor_BZH_scaffold_167p00050 Brassica napus HOM05D004128 ORTHO05D008395 3.0e-21 107.5 130 43.1
BolC9t58724H Brassica oleracea HOM05D004128 ORTHO05D008395 5.1e-21 106.7 72 72.2
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-20 105.1 69 73.9
BolC2t10084H Brassica oleracea HOM05D004128 ORTHO05D008395 5.7e-20 103.2 146 39.7
BolC8t48683H Brassica oleracea HOM05D008062 ORTHO05D008395 9.7e-20 102.4 134 41.0
BolC4t28166H Brassica oleracea HOM05D008062 ORTHO05D008395 1.7e-19 101.7 135 40.7
BcaC07g37416 Brassica carinata HOM05D004128 ORTHO05D008395 6.3e-19 99.8 170 42.4
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 8.2e-19 99.4 151 43.7
A01p25700 Brassica napus HOM05D008062 ORTHO05D008395 3.4e-17 94.0 124 39.5
A02p15830 Brassica napus HOM05D008062 ORTHO05D008395 2.2e-16 91.3 123 40.7
A06p00930 Brassica napus HOM05D008062 ORTHO05D008395 2.2e-16 91.3 123 40.7
C06p53090 Brassica napus HOM05D008735 ORTHO05D097507 2.2e-16 91.3 72 68.1
BcaC07g40144 Brassica carinata HOM05D013675 ORTHO05D091228 3.8e-16 90.5 53 81.1
C09p43170 Brassica napus HOM05D007203 ORTHO05D013810 3.8e-16 90.5 151 39.7
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 6.5e-16 89.7 55 72.7
C03p49780 Brassica napus HOM05D004128 ORTHO05D008395 6.5e-16 89.7 43 95.3
BolC2t07481H Brassica oleracea HOM05D008062 ORTHO05D008395 6.5e-16 89.7 123 39.0
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 8.5e-16 89.4 126 47.6
C05p06180 Brassica napus HOM05D008062 ORTHO05D008395 2.5e-15 87.8 119 40.3
C09p52720 Brassica napus HOM05D004128 ORTHO05D008395 2.5e-15 87.8 43 93.0
BolC5t30880H Brassica oleracea HOM05D004128 ORTHO05D013239 2.5e-15 87.8 43 93.0
BcaC08g44612 Brassica carinata HOM05D007203 ORTHO05D011558 4.2e-15 87.0 89 55.1
BraA02t06439Z Brassica rapa HOM05D004128 ORTHO05D008395 4.2e-15 87.0 122 40.2
C09p32150 Brassica napus HOM05D008062 ORTHO05D008395 5.5e-15 86.7 122 40.2
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 5.5e-15 86.7 151 44.4
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 5.5e-15 86.7 126 46.8
BcaB04g18992 Brassica carinata HOM05D004128 ORTHO05D095711 1.6e-14 85.1 98 52.0
BcaB05g22460 Brassica carinata HOM05D008735 ORTHO05D094962 1.6e-14 85.1 98 52.0
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 6.1e-14 83.2 120 45.0
BcaB07g32839 Brassica carinata HOM05D004128 ORTHO05D008395 1.0e-13 82.4 97 50.5
BcaB01g01318 Brassica carinata HOM05D004128 ORTHO05D008395 1.8e-13 81.6 86 50.0
C08p52210 Brassica napus HOM05D010080 ORTHO05D012169 3.9e-13 80.5 92 54.3
C04p32440 Brassica napus HOM05D008735 ORTHO05D099532 6.7e-13 79.7 67 65.7
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 8.8e-13 79.3 137 42.3
BolC3t18729H Brassica oleracea HOM05D004128 ORTHO05D008395 1.5e-12 78.6 135 34.8
A09p64600 Brassica napus HOM05D004128 ORTHO05D008395 2.0e-12 78.2 86 45.3
C02p45990 Brassica napus HOM05D004128 ORTHO05D008395 2.6e-12 77.8 86 45.3
BolC3t20838H Brassica oleracea HOM05D004128 ORTHO05D104579 2.6e-12 77.8 341 44.9
C03p49840 Brassica napus HOM05D004128 ORTHO05D008395 4.4e-12 77.0 86 45.3
C06p42690 Brassica napus HOM05D007203 ORTHO05D013810 4.4e-12 77.0 123 40.7
BolC1t02375H Brassica oleracea HOM05D004128 ORTHO05D008395 9.7e-12 75.9 86 44.2
BolC5t31082H Brassica oleracea HOM05D004128 ORTHO05D024629 1.7e-11 75.1 39 92.3
C06p45720 Brassica napus HOM05D007203 ORTHO05D013810 2.2e-11 74.7 127 40.9
BcaC01g00878 Brassica carinata HOM05D004128 ORTHO05D096075 2.8e-11 74.3 112 57.1
C09p63040 Brassica napus HOM05D007203 ORTHO05D013810 3.1e-10 70.9 126 38.9
BolC4t27914H Brassica oleracea HOM05D008062 ORTHO05D008395 3.1e-10 70.9 134 34.3
BraA05t21895Z Brassica rapa HOM05D004128 ORTHO05D008395 5.3e-10 70.1 34 94.1
C09p19220 Brassica napus HOM05D004128 ORTHO05D102580 1.2e-09 68.9 80 56.2
BolC6t38322H Brassica oleracea HOM05D004128 ORTHO05D008395 1.2e-09 68.9 66 43.9
C03p46960 Brassica napus HOM05D008735 ORTHO05D099308 2.0e-09 68.2 71 57.7
BcaC01g00876 Brassica carinata HOM05D004128 ORTHO05D008395 5.9e-09 66.6 34 88.2
BcaC08g45091 Brassica carinata HOM05D004128 ORTHO05D008395 7.7e-09 66.2 80 56.2
C09p28930 Brassica napus HOM05D007203 ORTHO05D008395 7.7e-09 66.2 106 42.5
C04p39160 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-08 65.5 34 88.2
C03p80320 Brassica napus HOM05D008735 ORTHO05D097331 1.7e-08 65.1 72 59.7
Sp7g07830 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.7e-08 65.1 92 39.1
BcaC03g14469 Brassica carinata HOM05D004128 ORTHO05D008395 2.2e-08 64.7 83 57.8
C03p85510 Brassica napus HOM05D004128 ORTHO05D013239 2.9e-08 64.3 47 72.3
BcaB05g23062 Brassica carinata HOM05D004128 ORTHO05D092751 5.0e-08 63.5 114 35.1
C04p37860 Brassica napus HOM05D008735 ORTHO05D099266 5.0e-08 63.5 54 66.7
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 6.5e-08 63.2 95 46.3
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 8.5e-08 62.8 90 50.0
C02p46650 Brassica napus HOM05D008735 ORTHO05D098808 8.5e-08 62.8 73 57.5
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 1.1e-07 62.4 269 39.8
BcaC05g27574 Brassica carinata HOM05D007203 ORTHO05D039927 1.5e-07 62.0 84 46.4
C03p79170 Brassica napus HOM05D008735 ORTHO05D098026 1.5e-07 62.0 72 58.3
BraA05t20994Z Brassica rapa HOM05D004128 ORTHO05D024629 1.5e-07 62.0 37 83.8
Sp6g02630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 1.9e-07 61.6 129 34.9
BcaC04g22448 Brassica carinata HOM05D004128 ORTHO05D096019 4.2e-07 60.5 269 48.3
A08p09180 Brassica napus HOM05D004128 ORTHO05D008395 4.2e-07 60.5 87 54.0
C06p31950 Brassica napus HOM05D004128 ORTHO05D008395 2.7e-06 57.8 55 43.6
C01p48550 Brassica napus HOM05D004128 ORTHO05D008395 4.7e-06 57.0 49 63.3
C03p57000 Brassica napus HOM05D007203 ORTHO05D031716 4.7e-06 57.0 100 49.0
BolC9t58725H Brassica oleracea HOM05D004128 ORTHO05D008395 4.7e-06 57.0 49 63.3
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 6.1e-06 56.6 83 54.2
BcaC04g20967 Brassica carinata HOM05D004128 ORTHO05D008395 6.1e-06 56.6 257 40.1
BcaC07g37436 Brassica carinata HOM05D004128 ORTHO05D008395 8.0e-06 56.2 63 63.5


User provided reference genes

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