Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g50388 Brassica carinata HOM05D004331 ORTHO05D004984 2.9e-59 231.9 134 100.0
BolC1t02551H Brassica oleracea HOM05D004331 ORTHO05D004984 1.5e-58 229.6 134 99.3
C01p26060 Brassica napus HOM05D004331 ORTHO05D004984 1.6e-57 226.1 134 98.5
C04p02240 Brassica napus HOM05D004331 ORTHO05D004984 1.4e-56 223.0 134 85.8
BcaC09g50949 Brassica carinata HOM05D004331 ORTHO05D004984 5.2e-56 221.1 134 85.8
BcaC02g12734 Brassica carinata HOM05D004331 ORTHO05D004984 6.8e-56 220.7 134 96.3
A05p01900 Brassica napus HOM05D004331 ORTHO05D004984 6.8e-56 220.7 134 96.3
BraA05t19188Z Brassica rapa HOM05D004331 ORTHO05D004984 6.8e-56 220.7 134 96.3
Sp4g23120 Schrenkiella parvula HOM05D004331 ORTHO05D004984 6.8e-56 220.7 134 96.3
BcaC04g21857 Brassica carinata HOM05D004331 ORTHO05D004984 1.5e-55 219.5 134 84.3
C09p26570 Brassica napus HOM05D004331 ORTHO05D004984 1.7e-54 216.1 134 83.6
BolC9t55553H Brassica oleracea HOM05D004331 ORTHO05D004984 1.7e-54 216.1 134 83.6
BcaC02g11378 Brassica carinata HOM05D004331 ORTHO05D004984 4.8e-54 214.5 134 82.8
C04p16400 Brassica napus HOM05D004331 ORTHO05D004984 4.8e-54 214.5 134 82.8
AT3G56430 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 1.4e-53 213.0 112 93.8
AT2G40800 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 5.4e-53 211.1 134 91.0
AL5G37760 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 9.1e-53 210.3 112 92.9
BolC4t21871H Brassica oleracea HOM05D004331 ORTHO05D004984 9.1e-53 210.3 107 96.3
Carub.0005s2321 Capsella rubella HOM05D004331 ORTHO05D004984 9.1e-53 210.3 112 92.0
CARHR135900 Cardamine hirsuta HOM05D004331 ORTHO05D004984 9.1e-53 210.3 134 91.0
AL4G38690 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 2.7e-52 208.8 134 91.8
Thhalv10016808m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 3.5e-52 208.4 134 91.8
Sp5g06060 Schrenkiella parvula HOM05D004331 ORTHO05D004984 1.0e-51 206.8 133 87.2
Aa31LG10G11310 Aethionema arabicum HOM05D004331 ORTHO05D004984 1.7e-51 206.1 112 89.3
CARHR166560 Cardamine hirsuta HOM05D004331 ORTHO05D004984 5.5e-50 201.1 106 92.5
ClCG11G005520 Citrullus lanatus HOM05D004331 ORTHO05D004984 1.6e-49 199.5 131 80.9
TWI73G1241 Tripterygium wilfordii HOM05D004331 ORTHO05D004984 1.6e-49 199.5 132 74.2
Thhalv10006036m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 4.7e-49 198.0 106 91.5
Manes.10G004100 Manihot esculenta HOM05D004331 ORTHO05D004984 1.8e-48 196.1 134 71.6
Sed0000286 Sechium edule HOM05D004331 ORTHO05D004984 1.8e-48 196.1 112 84.8
THA.LOC104814366 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 1.8e-48 196.1 108 87.0
CiPaw.01G307700 Carya illinoinensis HOM05D004331 ORTHO05D004984 3.0e-48 195.3 111 84.7
Ca_16853_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 6.8e-48 194.1 112 81.2
Ca_29501_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 6.8e-48 194.1 112 81.2
Duzib128G0601 Durio zibethinus HOM05D004331 ORTHO05D004984 6.8e-48 194.1 112 82.1
C01p18940 Brassica napus HOM05D004331 ORTHO05D004984 8.8e-48 193.7 102 93.1
BolC1t01820H Brassica oleracea HOM05D004331 ORTHO05D004984 8.8e-48 193.7 102 93.1
A09p49380 Brassica napus HOM05D004331 ORTHO05D004984 1.2e-47 193.4 103 91.3
C08p31740 Brassica napus HOM05D004331 ORTHO05D004984 1.2e-47 193.4 103 91.3
BraA09t40391Z Brassica rapa HOM05D004331 ORTHO05D004984 1.2e-47 193.4 103 91.3
CANSAT56G0386 Cannabis sativa HOM05D004331 ORTHO05D004984 2.0e-47 192.6 131 74.0
Duzib114G0903 Durio zibethinus HOM05D004331 ORTHO05D004984 2.0e-47 192.6 110 83.6
Lalb_Chr11g0067651 Lupinus albus HOM05D004331 ORTHO05D004984 2.6e-47 192.2 112 82.1
BolC8t50795H Brassica oleracea HOM05D004331 ORTHO05D004984 4.4e-47 191.4 103 90.3
MD01G1171000 Malus domestica HOM05D004331 ORTHO05D004984 4.4e-47 191.4 102 90.2
TPR.G13966 Trifolium pratense HOM05D004331 ORTHO05D004984 5.7e-47 191.0 112 78.6
VMungo1309G0248 Vigna mungo HOM05D004331 ORTHO05D004984 7.5e-47 190.7 112 80.4
Cpa.g.sc19.35 Carica papaya HOM05D004331 ORTHO05D004984 9.8e-47 190.3 131 71.8
Peaxi162Scf00073g02119 Petunia axillaris HOM05D004331 ORTHO05D004984 9.8e-47 190.3 133 71.4
Ciclev10031884m.g Citrus clementina HOM05D004331 ORTHO05D004984 1.3e-46 189.9 112 81.2
THA.LOC104824369 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 1.3e-46 189.9 104 86.5
TAR636G1774 Trochodendron aralioides HOM05D004331 ORTHO05D004984 1.3e-46 189.9 132 70.5
Nitab4.5_0009756g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 2.2e-46 189.1 133 69.2
Oeu039397.2 Olea europaea HOM05D004331 ORTHO05D004984 3.7e-46 188.3 133 75.9
Psat5g069640 Pisum sativum HOM05D004331 ORTHO05D004984 3.7e-46 188.3 112 79.5
Sc11g0006070 Simmondsia chinensis HOM05D004331 ORTHO05D004984 4.9e-46 188.0 131 67.2
arahy.Tifrunner.gnm1.ann1.J1TSCZ Arachis hypogaea HOM05D004331 ORTHO05D004984 6.3e-46 187.6 105 83.8
arahy.Tifrunner.gnm1.ann1.M9I45E Arachis hypogaea HOM05D004331 ORTHO05D004984 6.3e-46 187.6 105 83.8
Sabra19G0075700 Salix brachista HOM05D004331 ORTHO05D004984 8.3e-46 187.2 107 84.1
Sabra19G0081100 Salix brachista HOM05D004331 ORTHO05D004984 8.3e-46 187.2 107 84.1
Phvul.009G042200 Phaseolus vulgaris HOM05D004331 ORTHO05D004984 1.1e-45 186.8 106 84.0
CsaV3_5G039270 Cucumis sativus L. HOM05D004331 ORTHO05D004984 1.4e-45 186.4 108 83.3
Migut.F00564 Erythranthe guttata HOM05D004331 ORTHO05D004984 1.8e-45 186.0 134 69.4
Dinv21866 Davidia involucrata HOM05D004331 ORTHO05D004984 2.4e-45 185.7 112 77.7
MD07G1237400 Malus domestica HOM05D004331 ORTHO05D004984 2.4e-45 185.7 101 87.1
MSTRG.156 Avicennia marina HOM05D004331 ORTHO05D004984 5.4e-45 184.5 133 68.4
Potri.019G062200 Populus trichocarpa HOM05D004331 ORTHO05D004984 5.4e-45 184.5 101 86.1
Gohir.D10G184000 Gossypium hirsutum HOM05D004331 ORTHO05D004984 7.0e-45 184.1 105 84.8
Gorai.011G206200 Gossypium raimondii HOM05D004331 ORTHO05D004984 7.0e-45 184.1 105 84.8
RcHm_v2.0_Chr1g0372681 Rosa chinensis HOM05D004331 ORTHO05D004984 7.0e-45 184.1 105 83.8
SGA_v2.0_scaffold397G50761 Striga asiatica HOM05D004331 ORTHO05D004984 7.0e-45 184.1 112 77.7
Dinv34508 Davidia involucrata HOM05D004331 ORTHO05D004984 9.1e-45 183.7 112 76.8
FvH4_7g26230 Fragaria vesca HOM05D004331 ORTHO05D004984 9.1e-45 183.7 104 84.6
FAN06G3213 Fragaria x ananassa HOM05D004331 ORTHO05D004984 9.1e-45 183.7 104 84.6
FAN10G3590 Fragaria x ananassa HOM05D004331 ORTHO05D004984 9.1e-45 183.7 104 84.6
FAN01G2544 Fragaria x ananassa HOM05D004331 ORTHO05D004984 1.2e-44 183.3 104 84.6
Atru.chr12.214 Acer truncatum HOM05D004331 ORTHO05D004984 1.6e-44 183.0 101 85.1
QL08p065166 Quercus lobata HOM05D004331 ORTHO05D004984 1.6e-44 183.0 102 84.3
Cfa001189 Carpinus fangiana HOM05D004331 ORTHO05D004984 3.5e-44 181.8 101 85.1
PGR142G0580 Punica granatum HOM05D004331 ORTHO05D004984 3.5e-44 181.8 101 83.2
GSVIVG01032862001 Vitis vinifera HOM05D004331 ORTHO05D004984 3.5e-44 181.8 101 83.2
Glyma.06G141000 Glycine max HOM05D004331 ORTHO05D004984 4.5e-44 181.4 101 82.2
Lj1g0025811 Lotus japonicus HOM05D004331 ORTHO05D004984 4.5e-44 181.4 105 78.1
Eucgr.L02349 Eucalyptus grandis HOM05D004331 ORTHO05D004984 5.9e-44 181.0 101 82.2
MELO3C022105.2 Cucumis melo HOM05D004331 ORTHO05D004984 1.0e-43 180.3 101 85.1
Lj1A969T93 Lonicera japonica HOM05D004331 ORTHO05D004984 1.0e-43 180.3 133 75.9
Haze_17376 Corylus avellana HOM05D004331 ORTHO05D004984 1.3e-43 179.9 101 84.2
Medtr3g093690 Medicago truncatula HOM05D004331 ORTHO05D004984 1.3e-43 179.9 106 79.2
Gohir.A10G177400 Gossypium hirsutum HOM05D004331 ORTHO05D004984 2.3e-43 179.1 101 85.1
HanXRQChr07g0204811 Helianthus annuus HOM05D004331 ORTHO05D004984 6.6e-43 177.6 134 65.7
MBI15_g36678_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 6.6e-43 177.6 112 75.0
Eucgr.G03152 Eucalyptus grandis HOM05D004331 ORTHO05D004984 8.6e-43 177.2 101 81.2
Glyma.04G223900 Glycine max HOM05D004331 ORTHO05D004984 8.6e-43 177.2 101 80.2
CSS0028422 Camellia sinensis var. sinensis HOM05D004331 ORTHO05D004984 1.1e-42 176.8 107 77.6
Sopen03g025450 Solanum pennellii HOM05D004331 ORTHO05D004984 1.5e-42 176.4 105 79.0
Lalb_Chr08g0239281 Lupinus albus HOM05D004331 ORTHO05D004984 1.9e-42 176.0 112 76.8
CAN.G30.2 Capsicum annuum HOM05D004331 ORTHO05D004984 2.5e-42 175.6 100 83.0
Thecc.10G186200 Theobroma cacao HOM05D004331 ORTHO05D004984 2.5e-42 175.6 102 83.3
Solyc03g095470.3 Solanum lycopersicum HOM05D004331 ORTHO05D004984 3.3e-42 175.3 105 78.1
Actinidia01013 Actinidia chinensis HOM05D004331 ORTHO05D004984 5.6e-42 174.5 100 82.0
Hund13431 Selenicereus undatus HOM05D004331 ORTHO05D004984 5.6e-42 174.5 133 64.7
PSO017G4126 Papaver somniferum HOM05D004331 ORTHO05D004984 7.2e-42 174.1 112 75.0
Aqoxy4G03301 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 9.5e-42 173.7 106 76.4
COL.COLO4_19485 Corchorus olitorius HOM05D004331 ORTHO05D004984 9.5e-42 173.7 101 83.2
PGSC0003DMG400005253 Solanum tuberosum HOM05D004331 ORTHO05D004984 9.5e-42 173.7 100 81.0
ATR1127G084 Amborella trichopoda HOM05D004331 ORTHO05D004984 1.6e-41 172.9 106 75.5
Actinidia07780 Actinidia chinensis HOM05D004331 ORTHO05D004984 2.1e-41 172.6 112 78.6
Cc02_g05110 Coffea canephora HOM05D004331 ORTHO05D004984 2.8e-41 172.2 100 81.0
Nn5g26801 Nelumbo nucifera HOM05D004331 ORTHO05D004984 2.8e-41 172.2 106 75.5
SalBow3G0869 Salvia bowleyana HOM05D004331 ORTHO05D004984 2.8e-41 172.2 99 80.8
Os01g0168300 Oryza sativa ssp. japonica HOM05D004331 ORTHO05D004984 3.6e-41 171.8 112 75.0
Ah.10g029610 Amaranthus hybridus HOM05D000033 ORTHO05D000913 6.1e-41 171.0 112 70.5
SEGI_36006 Sequoiadendron giganteum HOM05D004331 ORTHO05D004984 1.0e-40 170.2 100 79.0
SGA_v2.0_scaffold60G20876 Striga asiatica HOM05D004331 ORTHO05D004984 1.0e-40 170.2 112 72.3
vmacro09950 Vaccinium macrocarpon HOM05D004331 ORTHO05D004984 1.8e-40 169.5 100 77.0
AUR62030578 Chenopodium quinoa HOM05D004331 ORTHO05D004984 2.3e-40 169.1 108 73.1
PSO170G2208 Papaver somniferum HOM05D004331 ORTHO05D004984 2.3e-40 169.1 105 75.2
Lsat_1_v5_gn_2_127600 Lactuca sativa HOM05D004331 ORTHO05D004984 4.0e-40 168.3 108 74.1
BcaC04g23398 Brassica carinata HOM05D004331 ORTHO05D004984 5.2e-40 167.9 134 79.9
AUR62032546 Chenopodium quinoa HOM05D004331 ORTHO05D004984 5.2e-40 167.9 108 72.2
DCAR_020157 Daucus carota HOM05D004331 ORTHO05D004984 5.2e-40 167.9 100 78.0
unitig_88.g27825 Utricularia gibba HOM05D004331 ORTHO05D004984 5.2e-40 167.9 108 73.1
Zm00001eb336450 Zea mays HOM05D004331 ORTHO05D004984 5.2e-40 167.9 108 75.0
ECA238G1814 Erigeron canadensis HOM05D004331 ORTHO05D004984 8.9e-40 167.2 107 73.8
EL10Ac2g02684 Beta vulgaris HOM05D004331 ORTHO05D004984 1.2e-39 166.8 108 73.1
Rhsim09G0186700 Rhododendron simsii HOM05D004331 ORTHO05D004984 1.2e-39 166.8 105 73.3
C03p81590 Brassica napus HOM05D004331 ORTHO05D004984 1.5e-39 166.4 106 83.0
BolC3t20429H Brassica oleracea HOM05D004331 ORTHO05D004984 1.5e-39 166.4 106 83.0
HPP92_012570 Vanilla planifolia HOM05D004331 ORTHO05D004984 3.4e-39 165.2 112 73.2
BcaC01g00580 Brassica carinata HOM05D003032 ORTHO05D003456 4.4e-39 164.9 106 82.1
Hma1.2p1_0264F.1_g105850 Hydrangea macrophylla HOM05D004331 ORTHO05D004984 7.5e-39 164.1 100 78.0
Pp3c7_18440 Physcomitrium patens HOM05D004331 ORTHO05D004984 1.2e-36 156.8 133 58.6
Mapoly0158s0020 Marchantia polymorpha HOM05D004331 ORTHO05D004984 3.5e-36 155.2 107 72.0
Pp3c1_5190 Physcomitrium patens HOM05D004331 ORTHO05D004984 1.5e-34 149.8 112 64.3
AagrBONN_evm.TU.Sc2ySwM_340.90 Anthoceros agrestis HOM05D004331 ORTHO05D004984 3.3e-34 148.7 100 70.0
Actinidia13632 Actinidia chinensis HOM05D004331 ORTHO05D004984 1.7e-30 136.3 92 73.9
CBR_g29882 Chara braunii HOM05D004331 ORTHO05D004984 3.2e-29 132.1 100 63.0
SMO361G0183 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 1.2e-28 130.2 115 56.5
SMO199G0115 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 1.6e-28 129.8 116 56.0
BolC9t53789H Brassica oleracea HOM05D004331 ORTHO05D004984 6.0e-28 127.9 87 95.4
Manes.03G048500 Manihot esculenta HOM05D004331 ORTHO05D004984 6.6e-27 124.4 108 61.1
BcaC07g39957 Brassica carinata HOM05D004331 ORTHO05D004984 1.1e-26 123.6 103 62.1
Carub.0004s2310 Capsella rubella HOM05D004331 ORTHO05D004984 1.5e-26 123.2 86 73.3
Prupe.2G266500 Prunus persica HOM05D004331 ORTHO05D004984 2.6e-23 112.5 79 70.9
SMO361G0173 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 3.4e-23 112.1 111 48.6
SMO361G0787 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 3.4e-23 112.1 111 48.6
HPP92_012539 Vanilla planifolia HOM05D004331 ORTHO05D004984 2.9e-22 109.0 114 56.1
SHI31863 Sapria himalayana HOM05D004331 ORTHO05D004984 4.6e-20 101.7 65 69.2
VMungo0540G1227 Vigna mungo HOM05D004331 ORTHO05D004984 1.3e-19 100.1 82 63.4
MSTRG.8387 Avicennia marina HOM05D004331 ORTHO05D004984 5.1e-19 98.2 73 63.0
BraA04t18575Z Brassica rapa HOM05D004331 ORTHO05D016805 4.4e-15 85.1 44 95.5
BolC4t28360H Brassica oleracea HOM05D004331 ORTHO05D004984 1.9e-13 79.7 71 62.0
PRCOL_00001688 Prasinoderma coloniale HOM05D004331 ORTHO05D004984 1.2e-12 77.0 111 39.6
Nitab4.5_0018056g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 2.1e-12 76.3 45 75.6
Aqoxy4G02083 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 4.6e-12 75.1 49 67.3
SHI31864 Sapria himalayana HOM05D004331 ORTHO05D004984 3.0e-11 72.4 45 73.3
Cre05.g232752 Chlamydomonas reinhardtii HOM05D004331 ORTHO05D004984 3.9e-11 72.0 152 30.3
CiPaw.02G199300 Carya illinoinensis HOM05D004331 ORTHO05D004984 4.3e-10 68.6 40 72.5
MCO04G099 Micromonas commoda HOM05D004331 ORTHO05D004984 8.4e-06 54.3 128 28.9


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