Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g50349 Brassica carinata HOM05D010379 ORTHO05D012419 5.8e-65 250.8 127 100.0
BolC1t02584H Brassica oleracea HOM05D010379 ORTHO05D012419 5.8e-65 250.8 127 100.0
C01p26370 Brassica napus HOM05D010379 ORTHO05D012419 4.9e-64 247.7 127 98.4
A01p21100 Brassica napus HOM05D010379 ORTHO05D012419 3.5e-62 241.5 127 97.6
BraA01t02021Z Brassica rapa HOM05D010379 ORTHO05D012419 3.5e-62 241.5 127 97.6
BcaNung00193 Brassica carinata HOM05D010379 ORTHO05D012419 2.1e-59 232.3 127 94.5
A08p12490 Brassica napus HOM05D010379 ORTHO05D012419 9.6e-52 206.8 128 84.4
BraA08t33240Z Brassica rapa HOM05D010379 ORTHO05D012419 9.6e-52 206.8 128 84.4
Sp7g15000 Schrenkiella parvula HOM05D010379 ORTHO05D012419 1.2e-51 206.5 124 85.5
Carub.0007s2506 Capsella rubella HOM05D010379 ORTHO05D012419 1.6e-51 206.1 127 85.0
BolC8t48370H Brassica oleracea HOM05D010379 ORTHO05D012419 2.1e-51 205.7 128 84.4
AL7G38540 Arabidopsis lyrata HOM05D010379 ORTHO05D012419 2.4e-50 202.2 127 83.5
AT4G16447 Arabidopsis thaliana HOM05D010379 ORTHO05D012419 9.0e-50 200.3 127 82.7
Thhalv10026565m.g Eutrema salsugineum HOM05D010379 ORTHO05D012419 9.0e-50 200.3 128 82.8
A03p49840 Brassica napus HOM05D010379 ORTHO05D012419 2.2e-48 195.7 127 80.3
BraA03t14079Z Brassica rapa HOM05D010379 ORTHO05D012419 2.2e-48 195.7 127 80.3
C07p47900 Brassica napus HOM05D010379 ORTHO05D012419 8.4e-48 193.7 127 79.5
BolC7t45312H Brassica oleracea HOM05D010379 ORTHO05D012419 8.4e-48 193.7 127 79.5
BcaC07g37989 Brassica carinata HOM05D010379 ORTHO05D012419 5.4e-47 191.0 117 85.5
CARHR222830 Cardamine hirsuta HOM05D010379 ORTHO05D012419 1.6e-46 189.5 128 79.7
THA.LOC104815481 Tarenaya hassleriana HOM05D010379 ORTHO05D012419 1.3e-19 100.1 142 52.1
Aa31LG2G12520 Aethionema arabicum HOM05D010379 ORTHO05D012419 5.3e-18 94.7 140 47.1
Cpa.g.sc2750.2 Carica papaya HOM05D004793 ORTHO05D004423 1.9e-12 76.3 128 41.4
PGR004G1083 Punica granatum HOM05D004793 ORTHO05D004423 3.2e-07 58.9 141 38.3
Medtr4g133720 Medicago truncatula HOM05D004793 ORTHO05D004423 4.2e-07 58.5 98 41.8
Eucgr.D01438 Eucalyptus grandis HOM05D004793 ORTHO05D004423 5.5e-07 58.2 144 38.9
GSVIVG01037785001 Vitis vinifera HOM05D004793 ORTHO05D004423 5.5e-07 58.2 127 40.9
CSS0022938 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 9.4e-07 57.4 133 39.1
CSS0021588 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 1.6e-06 56.6 133 41.4
Duzib192G0740 Durio zibethinus HOM05D004793 ORTHO05D004423 2.1e-06 56.2 133 38.3
Thecc.06G236700 Theobroma cacao HOM05D004793 ORTHO05D004423 2.1e-06 56.2 127 42.5
Migut.M00035 Erythranthe guttata HOM05D004793 ORTHO05D004423 7.9e-06 54.3 129 35.7


User provided reference genes

Program Settings