Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g50279 Brassica carinata HOM05D000802 ORTHO05D013138 5.4e-132 474.6 280 100.0
C01p27050 Brassica napus HOM05D000802 ORTHO05D013138 7.6e-118 427.6 309 86.1
BolC1t02653H Brassica oleracea HOM05D000802 ORTHO05D013138 4.2e-116 421.8 306 85.9
BraA01t02079Z Brassica rapa HOM05D000802 ORTHO05D013138 3.3e-89 332.4 299 72.6
A01p21700 Brassica napus HOM05D000802 ORTHO05D013138 4.1e-87 325.5 312 69.9
BcaC09g50273 Brassica carinata HOM05D000802 ORTHO05D013138 5.5e-68 261.9 309 58.3
BcaNung00244 Brassica carinata HOM05D000802 ORTHO05D013138 9.1e-63 244.6 309 58.6
Sp7g14180 Schrenkiella parvula HOM05D000802 ORTHO05D013138 1.2e-49 201.1 370 45.9
CARHR290330 Cardamine hirsuta HOM05D000802 ORTHO05D013138 1.1e-44 184.5 348 44.8
AL7G39480 Arabidopsis lyrata HOM05D000802 ORTHO05D013138 2.6e-41 173.3 364 44.2
Carub.0007s2584 Capsella rubella HOM05D000802 ORTHO05D013138 7.8e-38 161.8 373 42.1
Thhalv10024270m.g Eutrema salsugineum HOM05D000802 ORTHO05D013138 4.7e-27 125.9 350 37.7
Aa31LG10G6290 Aethionema arabicum HOM05D000802 ORTHO05D013138 6.2e-19 99.0 358 34.6
AT4G15810 Arabidopsis thaliana HOM05D000802 ORTHO05D013138 2.9e-08 63.5 284 33.5
THA.LOC104821777 Tarenaya hassleriana HOM05D000802 ORTHO05D013138 1.2e-06 58.2 271 30.6


User provided reference genes

Program Settings