Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g50258 Brassica carinata HOM05D000977 ORTHO05D001094 2.8e-87 325.1 149 100.0
BcaB01g05295 Brassica carinata HOM05D000977 ORTHO05D001094 6.1e-66 254.2 132 88.6
BcaC08g43417 Brassica carinata HOM05D000977 ORTHO05D001094 6.1e-58 227.6 138 80.4
BcaC02g11859 Brassica carinata HOM05D000977 ORTHO05D001094 1.3e-55 219.9 138 77.5
BcaNung02692 Brassica carinata HOM05D000977 ORTHO05D001094 1.0e-52 210.3 130 79.2
BcaB06g29565 Brassica carinata HOM05D000977 ORTHO05D001094 1.3e-52 209.9 137 74.5
BcaB03g16584 Brassica carinata HOM05D000977 ORTHO05D001094 4.0e-49 198.4 137 70.8
BcaB05g24371 Brassica carinata HOM05D000977 ORTHO05D001094 6.8e-49 197.6 137 70.1
BcaB01g05127 Brassica carinata HOM05D000977 ORTHO05D001094 2.0e-48 196.1 118 80.5
BcaB06g28154 Brassica carinata HOM05D000977 ORTHO05D001094 5.0e-44 181.4 124 71.0
BcaB06g25644 Brassica carinata HOM05D000977 ORTHO05D001094 3.6e-42 175.3 130 66.9
BcaC09g49070 Brassica carinata HOM05D000977 ORTHO05D001094 8.1e-42 174.1 137 66.4
BcaB01g05297 Brassica carinata HOM05D000977 ORTHO05D001094 2.3e-41 172.6 138 65.9
BcaB01g00007 Brassica carinata HOM05D000977 ORTHO05D001094 3.1e-41 172.2 91 84.6
BcaC01g01982 Brassica carinata HOM05D000977 ORTHO05D001094 2.1e-37 159.5 137 57.7
BcaC05g29021 Brassica carinata HOM05D000977 ORTHO05D001094 1.0e-36 157.1 143 58.7
BolC8t48639H Brassica oleracea HOM05D000977 ORTHO05D001094 4.3e-35 151.8 136 55.9
BcaC07g38215 Brassica carinata HOM05D000977 ORTHO05D001094 9.5e-35 150.6 134 54.5
BcaB08g35257 Brassica carinata HOM05D000977 ORTHO05D001094 1.6e-34 149.8 139 54.7
BcaC03g16289 Brassica carinata HOM05D000977 ORTHO05D001094 2.1e-34 149.4 134 53.7
BcaC01g04593 Brassica carinata HOM05D000977 ORTHO05D001094 6.2e-34 147.9 103 65.0
BcaC03g14189 Brassica carinata HOM05D000977 ORTHO05D001094 1.5e-32 143.3 76 88.2
BcaB05g24752 Brassica carinata HOM05D000977 ORTHO05D001094 2.0e-32 142.9 150 47.3
BcaC09g50062 Brassica carinata HOM05D000977 ORTHO05D001094 1.7e-31 139.8 143 48.3
BcaB06g25743 Brassica carinata HOM05D000956 ORTHO05D003111 3.8e-31 138.7 139 48.2
BcaC02g11345 Brassica carinata HOM05D000977 ORTHO05D001094 7.1e-30 134.4 145 48.3
BcaB01g00840 Brassica carinata HOM05D000977 ORTHO05D001094 8.7e-28 127.5 134 50.7
BcaC03g16184 Brassica carinata HOM05D000977 ORTHO05D001094 1.5e-27 126.7 135 46.7
BcaC04g19406 Brassica carinata HOM05D000977 ORTHO05D001094 1.9e-27 126.3 134 47.0
BolC5t34129H Brassica oleracea HOM05D000977 ORTHO05D001094 2.5e-27 125.9 76 72.4
BcaC02g07774 Brassica carinata HOM05D000977 ORTHO05D001094 2.8e-26 122.5 92 57.6
BcaB01g03041 Brassica carinata HOM05D000977 ORTHO05D001094 9.0e-25 117.5 59 89.8
BcaB06g28652 Brassica carinata HOM05D000977 ORTHO05D001094 9.0e-25 117.5 59 89.8
BcaC06g34629 Brassica carinata HOM05D000977 ORTHO05D001094 9.0e-25 117.5 90 56.7
BcaC09g50777 Brassica carinata HOM05D000977 ORTHO05D001094 1.2e-24 117.1 135 43.7
BcaC03g14593 Brassica carinata HOM05D000977 ORTHO05D001094 8.4e-23 110.9 86 57.0
BcaB02g06733 Brassica carinata HOM05D000977 ORTHO05D001094 1.2e-21 107.1 87 63.2
BcaC09g48657 Brassica carinata HOM05D000977 ORTHO05D001094 2.7e-21 105.9 131 43.5
BcaC05g28212 Brassica carinata HOM05D000977 ORTHO05D001094 3.5e-21 105.5 90 53.3
BcaB05g22931 Brassica carinata HOM05D000977 ORTHO05D001094 6.0e-21 104.8 136 42.6
BcaC05g25865 Brassica carinata HOM05D000977 ORTHO05D001094 1.7e-20 103.2 92 51.1
BcaB02g07004 Brassica carinata HOM05D000977 ORTHO05D001094 3.0e-20 102.4 50 90.0
BcaC06g34108 Brassica carinata HOM05D000977 ORTHO05D001094 3.0e-20 102.4 78 65.4
BcaNung05397 Brassica carinata HOM05D000977 ORTHO05D001094 6.6e-20 101.3 49 93.9
BcaC09g49400 Brassica carinata HOM05D000977 ORTHO05D001094 1.9e-19 99.8 78 65.4
BcaC03g15612 Brassica carinata HOM05D000977 ORTHO05D001094 3.3e-19 99.0 135 42.2
BcaC08g44076 Brassica carinata HOM05D000977 ORTHO05D001094 3.6e-18 95.5 134 41.0
BcaB07g33579 Brassica carinata HOM05D000977 ORTHO05D001094 4.8e-18 95.1 90 51.1
BcaC07g38370 Brassica carinata HOM05D000977 ORTHO05D001094 6.2e-18 94.7 134 40.3
BcaB07g33774 Brassica carinata HOM05D000977 ORTHO05D001094 6.9e-17 91.3 126 45.2
BcaB03g16826 Brassica carinata HOM05D000834 ORTHO05D000909 9.0e-17 90.9 94 54.3
A05p16280 Brassica napus HOM05D000977 ORTHO05D001094 2.6e-16 89.4 117 39.3
C05p08440 Brassica napus HOM05D000977 ORTHO05D001094 4.2e-14 82.0 110 38.2
BraA10t43803Z Brassica rapa HOM05D000977 ORTHO05D001094 4.2e-14 82.0 110 38.2
C03p33940 Brassica napus HOM05D000977 ORTHO05D001094 5.4e-14 81.6 110 38.2
BcaC01g00337 Brassica carinata HOM05D000977 ORTHO05D001094 7.1e-14 81.3 110 38.2
BraA06t25649Z Brassica rapa HOM05D000977 ORTHO05D001094 7.1e-14 81.3 88 47.7
BcaC02g11241 Brassica carinata HOM05D000977 ORTHO05D001094 2.1e-13 79.7 45 73.3
BcaC07g37500 Brassica carinata HOM05D000977 ORTHO05D001094 2.1e-13 79.7 110 38.2
BcaB08g36951 Brassica carinata HOM05D000977 ORTHO05D001094 6.0e-13 78.2 57 66.7
BcaC01g01703 Brassica carinata HOM05D000977 ORTHO05D001094 6.0e-13 78.2 135 36.3
BcaC08g43369 Brassica carinata HOM05D000977 ORTHO05D001094 7.9e-13 77.8 110 36.4
C06p07370 Brassica napus HOM05D000977 ORTHO05D001094 7.9e-13 77.8 110 36.4
BcaB03g16512 Brassica carinata HOM05D000977 ORTHO05D001094 1.0e-12 77.4 110 36.4
BcaC05g25704 Brassica carinata HOM05D000977 ORTHO05D001094 1.8e-12 76.6 87 41.4
BcaC05g28606 Brassica carinata HOM05D000977 ORTHO05D001094 2.3e-12 76.3 75 44.0
BcaC04g23591 Brassica carinata HOM05D000977 ORTHO05D001094 3.0e-12 75.9 104 40.4
BcaB02g07001 Brassica carinata HOM05D000977 ORTHO05D001094 5.1e-12 75.1 61 62.3
BcaC03g15217 Brassica carinata HOM05D000977 ORTHO05D001094 5.1e-12 75.1 87 41.4
BcaNung00428 Brassica carinata HOM05D000977 ORTHO05D001094 5.1e-12 75.1 43 76.7
BolC2t08846H Brassica oleracea HOM05D000977 ORTHO05D001094 5.1e-12 75.1 87 41.4
BolC3t19702H Brassica oleracea HOM05D000977 ORTHO05D001094 5.1e-12 75.1 110 36.4
BcaC07g37597 Brassica carinata HOM05D000977 ORTHO05D001094 8.7e-12 74.3 75 44.0
BcaB07g33902 Brassica carinata HOM05D000977 ORTHO05D008837 1.1e-11 73.9 77 42.9
BcaC03g16857 Brassica carinata HOM05D000977 ORTHO05D001094 1.1e-11 73.9 75 42.7
C09p43120 Brassica napus HOM05D000977 ORTHO05D001094 1.5e-11 73.6 115 33.9
BolC9t57183H Brassica oleracea HOM05D000977 ORTHO05D001094 1.5e-11 73.6 115 33.9
BcaB05g25307 Brassica carinata HOM05D000977 ORTHO05D001094 2.5e-11 72.8 76 44.7
BcaC06g33964 Brassica carinata HOM05D000977 ORTHO05D001094 2.5e-11 72.8 82 41.5
BcaC04g20474 Brassica carinata HOM05D000977 ORTHO05D001094 4.3e-11 72.0 115 33.9
BcaC05g25860 Brassica carinata HOM05D000977 ORTHO05D001094 5.6e-11 71.6 86 44.2
BcaC08g44704 Brassica carinata HOM05D000977 ORTHO05D001094 7.4e-11 71.2 134 35.1
A04p14250 Brassica napus HOM05D000977 ORTHO05D001094 7.4e-11 71.2 102 36.3
BcaC01g02182 Brassica carinata HOM05D000977 ORTHO05D001094 1.6e-10 70.1 103 35.9
BolSC21t60291H Brassica oleracea HOM05D000977 ORTHO05D001094 1.6e-10 70.1 103 35.9
BcaC04g22822 Brassica carinata HOM05D000977 ORTHO05D001094 2.8e-10 69.3 75 41.3
BcaB03g14367 Brassica carinata HOM05D000977 ORTHO05D001094 4.8e-10 68.6 103 34.0
BcaB08g35410 Brassica carinata HOM05D000977 ORTHO05D001094 4.8e-10 68.6 75 38.7
BcaC09g48979 Brassica carinata HOM05D000977 ORTHO05D001094 4.8e-10 68.6 75 40.0
BcaB01g00648 Brassica carinata HOM05D000977 ORTHO05D010766 6.2e-10 68.2 75 38.7
BcaC06g35365 Brassica carinata HOM05D000977 ORTHO05D001094 6.2e-10 68.2 98 35.7
BcaB08g35729 Brassica carinata HOM05D000977 ORTHO05D001094 8.1e-10 67.8 64 46.9
BcaC05g27245 Brassica carinata HOM05D000977 ORTHO05D001094 8.1e-10 67.8 75 41.3
BcaC05g27597 Brassica carinata HOM05D000977 ORTHO05D001094 8.1e-10 67.8 75 40.0
BcaC03g15595 Brassica carinata HOM05D000977 ORTHO05D001094 1.4e-09 67.0 80 40.0
BolC5t33109H Brassica oleracea HOM05D000977 ORTHO05D001094 1.8e-09 66.6 145 32.4
BcaB01g03497 Brassica carinata HOM05D000977 ORTHO05D010766 2.4e-09 66.2 75 37.3
BcaC01g01159 Brassica carinata HOM05D000977 ORTHO05D001094 2.4e-09 66.2 93 36.6
BcaC01g03210 Brassica carinata HOM05D000977 ORTHO05D001094 2.4e-09 66.2 75 38.7
BcaB06g29622 Brassica carinata HOM05D000977 ORTHO05D001094 3.1e-09 65.9 84 39.3
BcaB07g33258 Brassica carinata HOM05D000977 ORTHO05D010766 4.0e-09 65.5 75 36.0
BcaC09g49808 Brassica carinata HOM05D000977 ORTHO05D001094 4.0e-09 65.5 63 44.4
C04p44910 Brassica napus HOM05D000977 ORTHO05D001094 4.0e-09 65.5 62 45.2
BolC6t36171H Brassica oleracea HOM05D000977 ORTHO05D001094 4.0e-09 65.5 102 33.3
BcaC09g49398 Brassica carinata HOM05D000977 ORTHO05D001094 5.3e-09 65.1 102 34.3
BcaC05g27458 Brassica carinata HOM05D000977 ORTHO05D001094 9.0e-09 64.3 96 34.4
BcaC06g34451 Brassica carinata HOM05D000977 ORTHO05D001094 9.0e-09 64.3 96 34.4
BcaC08g43667 Brassica carinata HOM05D000977 ORTHO05D001094 1.2e-08 63.9 102 33.3
BcaC09g51962 Brassica carinata HOM05D000977 ORTHO05D001094 1.2e-08 63.9 123 30.1
BcaC05g27350 Brassica carinata HOM05D000977 ORTHO05D001094 1.5e-08 63.5 63 42.9
BcaC06g36718 Brassica carinata HOM05D000977 ORTHO05D091329 2.6e-08 62.8 111 34.2
AL8G14210 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 3.4e-08 62.4 104 34.6
BcaC09g48943 Brassica carinata HOM05D000977 ORTHO05D001094 3.4e-08 62.4 123 30.1
BcaB03g16268 Brassica carinata HOM05D000977 ORTHO05D001094 4.5e-08 62.0 67 37.3
BcaC04g22155 Brassica carinata HOM05D000977 ORTHO05D001094 4.5e-08 62.0 123 29.3
BcaC08g44987 Brassica carinata HOM05D000977 ORTHO05D039833 7.6e-08 61.2 67 52.2
BcaC09g49956 Brassica carinata HOM05D000977 ORTHO05D001094 7.6e-08 61.2 123 29.3
BcaC08g42857 Brassica carinata HOM05D000977 ORTHO05D001094 1.3e-07 60.5 72 40.3
BcaB05g24591 Brassica carinata HOM05D000977 ORTHO05D001094 1.7e-07 60.1 39 74.4
BcaC05g27349 Brassica carinata HOM05D000977 ORTHO05D001094 1.7e-07 60.1 100 36.0
BcaC02g11706 Brassica carinata HOM05D000977 ORTHO05D001094 2.2e-07 59.7 60 53.3
BcaC04g22236 Brassica carinata HOM05D000977 ORTHO05D001094 2.2e-07 59.7 64 39.1
BcaC09g50384 Brassica carinata HOM05D000977 ORTHO05D001094 3.8e-07 58.9 103 28.2
BcaB07g33549 Brassica carinata HOM05D000977 ORTHO05D001094 1.1e-06 57.4 87 39.1
BolC2t11864H Brassica oleracea HOM05D000977 ORTHO05D001094 1.1e-06 57.4 88 36.4
BolC5t32181H Brassica oleracea HOM05D000977 ORTHO05D001094 1.1e-06 57.4 66 37.9
BcaB08g35676 Brassica carinata HOM05D000977 ORTHO05D001094 1.4e-06 57.0 72 33.3
Carub.0008s0688 Capsella rubella HOM05D000977 ORTHO05D001094 1.4e-06 57.0 65 41.5
Carub.0027s0003 Capsella rubella HOM05D000977 ORTHO05D001094 1.4e-06 57.0 67 40.3
BcaC02g09936 Brassica carinata HOM05D000977 ORTHO05D001094 1.9e-06 56.6 87 36.8
BraA04t16482Z Brassica rapa HOM05D000977 ORTHO05D001094 1.9e-06 56.6 81 39.5
BcaC01g01920 Brassica carinata HOM05D000977 ORTHO05D001094 2.4e-06 56.2 112 31.2
BcaC04g21360 Brassica carinata HOM05D000977 ORTHO05D001094 2.4e-06 56.2 63 38.1
BcaC09g48661 Brassica carinata HOM05D000267 ORTHO05D010766 2.4e-06 56.2 81 34.6
BolC8t47282H Brassica oleracea HOM05D000977 ORTHO05D001094 2.4e-06 56.2 87 36.8
Thhalv10000546m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 2.4e-06 56.2 84 34.5
BcaB05g24440 Brassica carinata HOM05D000977 ORTHO05D001094 3.2e-06 55.8 75 29.3
BcaC02g10227 Brassica carinata HOM05D000977 ORTHO05D001094 4.2e-06 55.5 66 36.4
BcaC03g16219 Brassica carinata HOM05D000977 ORTHO05D001094 4.2e-06 55.5 66 36.4
BcaC05g28482 Brassica carinata HOM05D000977 ORTHO05D001094 7.1e-06 54.7 84 36.9
BcaC02g12311 Brassica carinata HOM05D000977 ORTHO05D001094 9.3e-06 54.3 85 35.3
BcaC05g28638 Brassica carinata HOM05D000977 ORTHO05D001094 9.3e-06 54.3 70 44.3


User provided reference genes

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