Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g50234 Brassica carinata HOM05D000353 ORTHO05D005681 2.1e-39 165.2 84 100.0
C02p27630 Brassica napus HOM05D000353 ORTHO05D012074 1.4e-35 152.5 77 98.7
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 1.8e-35 152.1 83 92.8
BcaC05g27602 Brassica carinata HOM05D000353 ORTHO05D012074 1.8e-35 152.1 83 92.8
A02p28660 Brassica napus HOM05D000353 ORTHO05D012074 1.8e-35 152.1 83 92.8
C05p35880 Brassica napus HOM05D000353 ORTHO05D005681 1.8e-35 152.1 83 92.8
BolC4t26685H Brassica oleracea HOM05D000353 ORTHO05D012074 1.8e-35 152.1 83 92.8
BolC5t34001H Brassica oleracea HOM05D000353 ORTHO05D012074 1.8e-35 152.1 83 92.8
BolC8t48492H Brassica oleracea HOM05D000353 ORTHO05D012074 1.8e-35 152.1 83 92.8
BraA02t07901Z Brassica rapa HOM05D000353 ORTHO05D012074 1.8e-35 152.1 83 92.8
C05p53350 Brassica napus HOM05D000353 ORTHO05D005681 2.4e-35 151.8 83 91.6
BolC2t09049H Brassica oleracea HOM05D000353 ORTHO05D012074 3.2e-35 151.4 83 91.6
BcaC03g15183 Brassica carinata HOM05D000353 ORTHO05D000174 4.1e-35 151.0 77 97.4
BcaC04g22103 Brassica carinata HOM05D000353 ORTHO05D012074 1.2e-34 149.4 83 90.4
C09p23330 Brassica napus HOM05D000353 ORTHO05D012074 1.2e-34 149.4 83 90.4
BolC5t34015H Brassica oleracea HOM05D000353 ORTHO05D012074 1.2e-34 149.4 83 91.6
BolC9t55251H Brassica oleracea HOM05D000353 ORTHO05D012074 1.2e-34 149.4 83 90.4
BolC5t32307H Brassica oleracea HOM05D000353 ORTHO05D012074 3.5e-34 147.9 83 90.4
BcaC06g33696 Brassica carinata HOM05D000353 ORTHO05D012074 4.6e-34 147.5 83 90.4
C03p63080 Brassica napus HOM05D000353 ORTHO05D005681 5.9e-34 147.1 83 90.4
BcaC06g36012 Brassica carinata HOM05D000353 ORTHO05D012074 2.3e-33 145.2 83 89.2
C07p19100 Brassica napus HOM05D000353 ORTHO05D012074 1.2e-31 139.4 83 84.3
BcaC06g35171 Brassica carinata HOM05D000353 ORTHO05D012074 1.6e-31 139.0 83 84.3
BolC7t42421H Brassica oleracea HOM05D000353 ORTHO05D012074 1.6e-31 139.0 83 84.3
A05p21300 Brassica napus HOM05D000353 ORTHO05D012074 3.6e-31 137.9 83 84.3
BraA05t21038Z Brassica rapa HOM05D000353 ORTHO05D012074 3.6e-31 137.9 83 84.3
C02p47700 Brassica napus HOM05D000353 ORTHO05D012074 6.2e-31 137.1 83 83.1
BolC9t57768H Brassica oleracea HOM05D000353 ORTHO05D012074 2.0e-29 132.1 83 84.3
A01p27040 Brassica napus HOM05D000353 ORTHO05D012074 1.4e-27 125.9 83 78.3
BraA01t02838Z Brassica rapa HOM05D000353 ORTHO05D012074 1.4e-27 125.9 83 78.3
C02p27150 Brassica napus HOM05D000353 ORTHO05D012074 3.3e-24 114.8 83 74.7
C09p49190 Brassica napus HOM05D000353 ORTHO05D005681 2.8e-23 111.7 62 91.9
BcaB01g00780 Brassica carinata HOM05D000353 ORTHO05D011975 1.3e-20 102.8 77 67.5
BcaB01g02874 Brassica carinata HOM05D000353 ORTHO05D011975 3.2e-19 98.2 77 64.9
BolC7t42422H Brassica oleracea HOM05D000353 ORTHO05D011975 8.1e-15 83.6 74 55.4
A01p27050 Brassica napus HOM05D000353 ORTHO05D011975 1.8e-14 82.4 89 51.7
BraA01t02839Z Brassica rapa HOM05D000353 ORTHO05D011975 1.8e-14 82.4 89 51.7
C09p64190 Brassica napus HOM05D000353 ORTHO05D011975 3.1e-14 81.6 89 51.7
BolC5t34008H Brassica oleracea HOM05D000353 ORTHO05D011975 3.1e-14 81.6 74 56.8
BolC9t59256H Brassica oleracea HOM05D000353 ORTHO05D011975 3.1e-14 81.6 89 51.7
C03p63090 Brassica napus HOM05D000353 ORTHO05D011975 6.8e-14 80.5 89 51.7
C09p23340 Brassica napus HOM05D000353 ORTHO05D011975 6.8e-14 80.5 87 52.9
BolC9t57769H Brassica oleracea HOM05D000353 ORTHO05D011975 6.8e-14 80.5 89 51.7
A02p28650 Brassica napus HOM05D000353 ORTHO05D011975 8.9e-14 80.1 89 51.7
C02p27140 Brassica napus HOM05D000353 ORTHO05D000174 8.9e-14 80.1 89 51.7
C05p35890 Brassica napus HOM05D000353 ORTHO05D011975 8.9e-14 80.1 89 51.7
BraA02t07900Z Brassica rapa HOM05D000353 ORTHO05D011975 8.9e-14 80.1 89 51.7
BolC8t47318H Brassica oleracea HOM05D000353 ORTHO05D011975 1.5e-13 79.3 89 49.4
C02p47690 Brassica napus HOM05D000353 ORTHO05D011975 2.0e-13 79.0 89 49.4
BolC2t10806H Brassica oleracea HOM05D000353 ORTHO05D011975 2.0e-13 79.0 89 49.4
BolC5t31839H Brassica oleracea HOM05D000353 ORTHO05D011975 2.0e-13 79.0 89 49.4
BolC5t34016H Brassica oleracea HOM05D000353 ORTHO05D011975 4.4e-13 77.8 89 50.6
C09p17510 Brassica napus HOM05D000353 ORTHO05D011975 7.6e-13 77.0 89 50.6
C05p53380 Brassica napus HOM05D000353 ORTHO05D011975 9.9e-13 76.6 89 50.6
BolC8t48493H Brassica oleracea HOM05D000353 ORTHO05D011975 1.3e-12 76.3 89 51.7
BolC5t32503H Brassica oleracea HOM05D000353 ORTHO05D042563 2.2e-12 75.5 72 54.2
BcaC05g27208 Brassica carinata HOM05D000353 ORTHO05D011975 2.9e-12 75.1 69 53.6
C05p37620 Brassica napus HOM05D000353 ORTHO05D042563 6.4e-12 73.9 72 52.8
C09p64180 Brassica napus HOM05D000353 ORTHO05D039625 1.4e-11 72.8 45 84.4
BcaB07g32709 Brassica carinata HOM05D000353 ORTHO05D005681 1.9e-11 72.4 56 67.9
BcaB03g15977 Brassica carinata HOM05D000353 ORTHO05D005681 4.1e-11 71.2 75 44.0
BcaC07g37502 Brassica carinata HOM05D000353 ORTHO05D039805 7.1e-11 70.5 79 49.4
BolC8t47825H Brassica oleracea HOM05D000353 ORTHO05D039805 7.1e-11 70.5 79 49.4
BcaC05g29110 Brassica carinata HOM05D000353 ORTHO05D039625 1.6e-10 69.3 45 84.4
BcaB08g34856 Brassica carinata HOM05D000353 ORTHO05D005681 3.5e-10 68.2 75 42.7
BcaB08g34640 Brassica carinata HOM05D000353 ORTHO05D005681 4.6e-10 67.8 75 40.0
BcaB01g01176 Brassica carinata HOM05D000353 ORTHO05D092964 7.8e-10 67.0 75 41.3
BcaB04g17266 Brassica carinata HOM05D000353 ORTHO05D005681 7.8e-10 67.0 75 41.3
BcaB04g18044 Brassica carinata HOM05D000353 ORTHO05D005681 7.8e-10 67.0 75 41.3
C07p19110 Brassica napus HOM05D000353 ORTHO05D011975 1.0e-09 66.6 62 51.6
BcaB02g10509 Brassica carinata HOM05D000353 ORTHO05D005681 1.3e-09 66.2 83 43.4
BcaB03g16214 Brassica carinata HOM05D000353 ORTHO05D005681 2.3e-09 65.5 87 48.3
BcaB01g01095 Brassica carinata HOM05D000353 ORTHO05D005681 1.1e-08 63.2 75 40.0
BcaB03g16076 Brassica carinata HOM05D000353 ORTHO05D005681 5.6e-08 60.8 83 38.6
BcaB05g24102 Brassica carinata HOM05D000353 ORTHO05D005681 7.3e-08 60.5 73 43.8
BolC8t48064H Brassica oleracea HOM05D000353 ORTHO05D033592 7.3e-08 60.5 76 39.5
BcaB02g11477 Brassica carinata HOM05D000353 ORTHO05D005681 9.6e-08 60.1 83 37.3
BraA02t07832Z Brassica rapa HOM05D000353 ORTHO05D027349 8.1e-07 57.0 80 35.0
A08p10030 Brassica napus HOM05D000353 ORTHO05D033592 1.1e-06 56.6 76 38.2
BcaB02g11108 Brassica carinata HOM05D000353 ORTHO05D005681 1.4e-06 56.2 89 39.3
C09p21140 Brassica napus HOM05D000353 ORTHO05D013242 1.4e-06 56.2 83 42.2
BolC9t55015H Brassica oleracea HOM05D000353 ORTHO05D013242 1.4e-06 56.2 83 42.2
BcaC01g04869 Brassica carinata HOM05D000353 ORTHO05D027041 1.8e-06 55.8 75 37.3
BolC9t59255H Brassica oleracea HOM05D000353 ORTHO05D105477 1.8e-06 55.8 32 81.2
C03p32830 Brassica napus HOM05D000353 ORTHO05D027041 2.4e-06 55.5 77 36.4
BolC3t15617H Brassica oleracea HOM05D000353 ORTHO05D027041 2.4e-06 55.5 77 36.4
BraA08t32999Z Brassica rapa HOM05D000353 ORTHO05D033592 5.2e-06 54.3 71 38.0
BcaB01g01136 Brassica carinata HOM05D000353 ORTHO05D013242 9.0e-06 53.5 52 50.0


User provided reference genes

Program Settings