Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g50110 Brassica carinata HOM05D001498 ORTHO05D016036 3.4e-110 401.7 212 100.0
C03p66360 Brassica napus HOM05D001498 ORTHO05D013028 8.4e-61 237.7 211 65.4
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 2.5e-60 236.1 211 64.9
BraA10t42921Z Brassica rapa HOM05D001498 ORTHO05D011263 1.6e-59 233.4 212 63.7
BraA08t32773Z Brassica rapa HOM05D001498 ORTHO05D011263 2.1e-59 233.0 212 63.2
BraA08t32949Z Brassica rapa HOM05D001498 ORTHO05D011263 7.9e-59 231.1 212 62.7
BraA08t32832Z Brassica rapa HOM05D001498 ORTHO05D011263 1.8e-58 229.9 212 63.7
BraA08t32604Z Brassica rapa HOM05D001498 ORTHO05D011263 2.3e-58 229.6 212 62.7
BraA01t03045Z Brassica rapa HOM05D001498 ORTHO05D011263 3.0e-58 229.2 215 62.3
BolC3t17912H Brassica oleracea HOM05D001498 ORTHO05D011263 5.1e-58 228.4 211 63.0
BolC1t04861H Brassica oleracea HOM05D001498 ORTHO05D016036 6.7e-50 201.4 165 72.7
BolC3t19485H Brassica oleracea HOM05D001498 ORTHO05D016036 4.3e-49 198.7 188 63.8
BraA09t38881Z Brassica rapa HOM05D001498 ORTHO05D013028 7.4e-49 198.0 197 59.9
BolC3t16976H Brassica oleracea HOM05D001498 ORTHO05D011263 1.1e-41 174.1 175 60.0
BcaB06g26725 Brassica carinata HOM05D001498 ORTHO05D016036 1.3e-40 170.6 194 56.7
BcaB02g11315 Brassica carinata HOM05D001498 ORTHO05D008559 4.8e-40 168.7 210 55.7
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 3.1e-39 166.0 201 56.7
BcaB01g01815 Brassica carinata HOM05D001498 ORTHO05D016036 7.7e-38 161.4 191 56.0
C02p52010 Brassica napus HOM05D001498 ORTHO05D013028 1.3e-37 160.6 171 57.9
BcaC01g06538 Brassica carinata HOM05D001498 ORTHO05D016036 1.7e-37 160.2 102 85.3
C01p30540 Brassica napus HOM05D001498 ORTHO05D011263 1.2e-35 154.1 151 61.6
BcaC04g20365 Brassica carinata HOM05D001498 ORTHO05D095589 1.1e-33 147.5 225 49.3
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 1.5e-33 147.1 85 88.2
A01p20530 Brassica napus HOM05D001498 ORTHO05D013028 2.0e-33 146.7 85 87.1
A01p28570 Brassica napus HOM05D001498 ORTHO05D013028 2.0e-33 146.7 85 87.1
BcaC05g28432 Brassica carinata HOM05D001498 ORTHO05D016036 3.3e-33 146.0 76 97.4
A08p06040 Brassica napus HOM05D001498 ORTHO05D013028 3.3e-33 146.0 85 85.9
BcaB07g33756 Brassica carinata HOM05D001498 ORTHO05D003542 3.7e-32 142.5 181 54.1
BolC5t32219H Brassica oleracea HOM05D001498 ORTHO05D016036 8.2e-32 141.4 102 75.5
BolC9t54651H Brassica oleracea HOM05D001498 ORTHO05D016036 5.9e-30 135.2 76 90.8
A09p33370 Brassica napus HOM05D001379 ORTHO05D001277 3.0e-26 122.9 221 40.7
C09p17610 Brassica napus HOM05D001498 ORTHO05D011263 4.0e-26 122.5 67 94.0
C01p30510 Brassica napus HOM05D001498 ORTHO05D011263 1.2e-25 120.9 69 89.9
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 1.2e-25 120.9 83 77.1
C06p18070 Brassica napus HOM05D001498 ORTHO05D011263 2.0e-25 120.2 67 92.5
A03p54370 Brassica napus HOM05D001498 ORTHO05D011263 4.4e-25 119.0 67 91.0
A10p06610 Brassica napus HOM05D001498 ORTHO05D011263 4.4e-25 119.0 67 91.0
C04p56120 Brassica napus HOM05D001498 ORTHO05D011263 4.4e-25 119.0 67 91.0
A01p26290 Brassica napus HOM05D001498 ORTHO05D011263 5.7e-25 118.6 67 91.0
A08p06050 Brassica napus HOM05D001498 ORTHO05D011263 7.5e-25 118.2 67 91.0
A08p07540 Brassica napus HOM05D001498 ORTHO05D011263 7.5e-25 118.2 67 89.6
C07p30730 Brassica napus HOM05D001498 ORTHO05D011263 7.5e-25 118.2 67 91.0
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 9.8e-25 117.9 68 86.8
C06p23330 Brassica napus HOM05D001498 ORTHO05D011263 1.7e-24 117.1 67 91.0
C09p21180 Brassica napus HOM05D001498 ORTHO05D011263 1.7e-24 117.1 67 89.6
BolC6t36238H Brassica oleracea HOM05D001498 ORTHO05D011263 1.7e-24 117.1 67 89.6
A01p28580 Brassica napus HOM05D001498 ORTHO05D011263 2.2e-24 116.7 67 89.6
A08p09510 Brassica napus HOM05D001498 ORTHO05D011263 2.2e-24 116.7 67 88.1
BcaC04g22592 Brassica carinata HOM05D001498 ORTHO05D019943 1.7e-21 107.1 62 90.3
BcaB07g33082 Brassica carinata HOM05D001498 ORTHO05D016036 4.2e-20 102.4 56 92.9
C09p19430 Brassica napus HOM05D001498 ORTHO05D013028 1.2e-19 100.9 62 85.5
C08p06690 Brassica napus HOM05D001498 ORTHO05D027369 2.1e-19 100.1 59 88.1
C09p27460 Brassica napus HOM05D001498 ORTHO05D013028 2.1e-19 100.1 59 88.1
BolC8t49420H Brassica oleracea HOM05D001498 ORTHO05D011448 2.1e-19 100.1 59 88.1
C01p48960 Brassica napus HOM05D001498 ORTHO05D013028 2.7e-19 99.8 59 88.1
C04p41870 Brassica napus HOM05D001498 ORTHO05D011448 3.6e-19 99.4 58 89.7
A05p28410 Brassica napus HOM05D001498 ORTHO05D011448 4.7e-19 99.0 59 86.4
BraA07t28351Z Brassica rapa HOM05D001498 ORTHO05D011448 4.7e-19 99.0 59 86.4
A08p07530 Brassica napus HOM05D001498 ORTHO05D013028 1.0e-18 97.8 59 84.7
A08p09500 Brassica napus HOM05D001498 ORTHO05D011448 1.4e-18 97.4 59 84.7
BolC3t18712H Brassica oleracea HOM05D001498 ORTHO05D011448 1.4e-18 97.4 59 84.7
A01p26280 Brassica napus HOM05D001498 ORTHO05D011448 2.3e-18 96.7 59 84.7
C09p16600 Brassica napus HOM05D001498 ORTHO05D011448 5.2e-18 95.5 58 87.9
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 3.4e-17 92.8 204 40.7
C04p41860 Brassica napus HOM05D001498 ORTHO05D011263 1.7e-16 90.5 49 91.8
C09p16590 Brassica napus HOM05D001498 ORTHO05D011263 1.7e-16 90.5 49 91.8
C09p28460 Brassica napus HOM05D001498 ORTHO05D011263 1.7e-16 90.5 49 91.8
BolC2t08804H Brassica oleracea HOM05D001498 ORTHO05D011263 1.7e-16 90.5 49 91.8
BolC4t25124H Brassica oleracea HOM05D001498 ORTHO05D011263 1.7e-16 90.5 49 91.8
BolC6t38705H Brassica oleracea HOM05D001498 ORTHO05D011263 1.7e-16 90.5 49 91.8
BolC8t47733H Brassica oleracea HOM05D001498 ORTHO05D011263 1.7e-16 90.5 49 91.8
C05p34960 Brassica napus HOM05D001498 ORTHO05D011263 2.2e-16 90.1 49 89.8
BcaB04g17974 Brassica carinata HOM05D001498 ORTHO05D093757 3.7e-16 89.4 204 42.2
A10p06850 Brassica napus HOM05D001498 ORTHO05D011263 3.7e-16 89.4 49 89.8
C03p75880 Brassica napus HOM05D001498 ORTHO05D011263 3.7e-16 89.4 49 89.8
C02p53490 Brassica napus HOM05D001498 ORTHO05D011263 4.9e-16 89.0 49 89.8
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 4.9e-16 89.0 53 86.8
BolC9t55021H Brassica oleracea HOM05D001498 ORTHO05D011263 4.9e-16 89.0 49 89.8
BolC6t36733H Brassica oleracea HOM05D001498 ORTHO05D011506 9.2e-15 84.7 211 37.9
BcaC04g19550 Brassica carinata HOM05D001498 ORTHO05D008559 3.5e-14 82.8 48 95.8
BcaC05g27520 Brassica carinata HOM05D001498 ORTHO05D008559 3.5e-14 82.8 48 95.8
BcaC07g39106 Brassica carinata HOM05D001498 ORTHO05D008559 3.5e-14 82.8 48 95.8
BcaC08g43732 Brassica carinata HOM05D001498 ORTHO05D008559 3.5e-14 82.8 48 95.8
BcaC08g44374 Brassica carinata HOM05D001498 ORTHO05D008559 3.5e-14 82.8 48 95.8
BolC2t11287H Brassica oleracea HOM05D001498 ORTHO05D008559 3.5e-14 82.8 48 95.8
BolC3t16975H Brassica oleracea HOM05D001498 ORTHO05D008559 3.5e-14 82.8 48 95.8
BolC9t55020H Brassica oleracea HOM05D000589 ORTHO05D001885 3.5e-14 82.8 48 95.8
BraA09t40147Z Brassica rapa HOM05D001498 ORTHO05D008559 3.5e-14 82.8 48 95.8
BolC6t37491H Brassica oleracea HOM05D000589 ORTHO05D001885 7.7e-14 81.6 48 93.8
BcaC07g38656 Brassica carinata HOM05D001498 ORTHO05D008559 1.7e-13 80.5 48 93.8
BcaC06g36689 Brassica carinata HOM05D001498 ORTHO05D091472 3.8e-13 79.3 107 53.3
BcaC04g22430 Brassica carinata HOM05D001498 ORTHO05D008559 8.6e-13 78.2 48 91.7
BcaB05g23540 Brassica carinata HOM05D001498 ORTHO05D008559 1.1e-12 77.8 48 91.7
BcaC08g44055 Brassica carinata HOM05D001498 ORTHO05D008559 1.5e-12 77.4 48 89.6
BcaB05g23075 Brassica carinata HOM05D001498 ORTHO05D008559 1.9e-12 77.0 45 93.3
BcaB06g26762 Brassica carinata HOM05D001498 ORTHO05D008559 1.9e-12 77.0 45 93.3
BcaB07g33083 Brassica carinata HOM05D001498 ORTHO05D008559 2.5e-12 76.6 44 95.5
BcaC05g26790 Brassica carinata HOM05D001498 ORTHO05D008559 2.5e-12 76.6 44 95.5
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 2.5e-12 76.6 44 95.5
BraA03t14503Z Brassica rapa HOM05D001498 ORTHO05D008559 2.5e-12 76.6 44 95.5
BraA08t32605Z Brassica rapa HOM05D000589 ORTHO05D001885 2.5e-12 76.6 44 95.5
BraA08t32950Z Brassica rapa HOM05D000589 ORTHO05D001885 2.5e-12 76.6 44 95.5
BcaB06g27859 Brassica carinata HOM05D001498 ORTHO05D008559 5.6e-12 75.5 48 89.6
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 7.3e-12 75.1 44 93.2
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 7.3e-12 75.1 44 93.2
BcaC01g02506 Brassica carinata HOM05D001498 ORTHO05D008559 1.2e-11 74.3 47 91.5
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 1.2e-11 74.3 44 93.2
BcaB07g33318 Brassica carinata HOM05D001498 ORTHO05D008559 2.8e-11 73.2 45 88.9
A10p06860 Brassica napus HOM05D001498 ORTHO05D013028 2.8e-11 73.2 42 90.5
C06p23320 Brassica napus HOM05D001498 ORTHO05D019943 1.2e-09 67.8 39 92.3
C04p56110 Brassica napus HOM05D001498 ORTHO05D019943 1.5e-09 67.4 42 83.3
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 3.4e-09 66.2 44 77.3
C09p28450 Brassica napus HOM05D001498 ORTHO05D027369 3.4e-09 66.2 42 81.0
BcaC02g09115 Brassica carinata HOM05D001498 ORTHO05D027369 7.5e-09 65.1 102 44.1
A03p54360 Brassica napus HOM05D001498 ORTHO05D013028 7.5e-09 65.1 36 94.4
BcaNung05283 Brassica carinata HOM05D001498 ORTHO05D008559 4.9e-08 62.4 45 82.2
BcaB07g32208 Brassica carinata HOM05D001498 ORTHO05D027369 6.4e-08 62.0 37 89.2
BcaB06g26316 Brassica carinata HOM05D001498 ORTHO05D008559 1.1e-07 61.2 45 71.1
BcaB06g26679 Brassica carinata HOM05D001498 ORTHO05D008559 5.4e-07 58.9 45 68.9
BcaC06g33590 Brassica carinata HOM05D001498 ORTHO05D093683 7.0e-07 58.5 32 93.8
BcaB05g24510 Brassica carinata HOM05D001498 ORTHO05D008559 9.2e-07 58.2 48 68.8
BcaC01g03920 Brassica carinata HOM05D001498 ORTHO05D091853 2.7e-06 56.6 129 38.8
BcaB04g17679 Brassica carinata HOM05D001498 ORTHO05D008559 7.8e-06 55.1 45 71.1


User provided reference genes

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