Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g50027 Brassica carinata HOM05D007568 ORTHO05D009779 2.5e-80 302.0 148 100.0
BolC8t51027H Brassica oleracea HOM05D007568 ORTHO05D009779 5.9e-77 290.8 153 95.4
A03p66080 Brassica napus HOM05D007568 ORTHO05D009779 1.2e-74 283.1 141 98.6
A05p17030 Brassica napus HOM05D007568 ORTHO05D009779 1.2e-74 283.1 141 98.6
A01p06890 Brassica napus HOM05D007568 ORTHO05D009779 3.6e-74 281.6 141 97.9
BolC2t10349H Brassica oleracea HOM05D007568 ORTHO05D009779 2.0e-64 249.2 125 97.6
BraA09t40709Z Brassica rapa HOM05D007568 ORTHO05D009779 3.1e-62 241.9 212 64.6
BcaB04g20792 Brassica carinata HOM05D007568 ORTHO05D009779 2.6e-56 222.2 178 64.0
BcaB07g31875 Brassica carinata HOM05D007568 ORTHO05D009779 5.0e-52 208.0 214 52.3
BcaB05g25263 Brassica carinata HOM05D007568 ORTHO05D009779 2.5e-51 205.7 214 52.8
BolC2t11013H Brassica oleracea HOM05D007568 ORTHO05D009779 2.3e-49 199.1 104 93.3
BcaC05g29164 Brassica carinata HOM05D007568 ORTHO05D009779 7.0e-46 187.6 155 70.3
BcaB04g18340 Brassica carinata HOM05D007568 ORTHO05D009779 1.9e-43 179.5 214 50.9
C02p26010 Brassica napus HOM05D007568 ORTHO05D009779 3.7e-39 165.2 211 44.5
C02p26050 Brassica napus HOM05D007568 ORTHO05D009779 5.0e-36 154.8 211 42.2
A05p27540 Brassica napus HOM05D007568 ORTHO05D009779 8.6e-36 154.1 211 42.2
BolC4t25354H Brassica oleracea HOM05D007568 ORTHO05D009779 3.0e-33 145.6 210 41.0
BolC5t34087H Brassica oleracea HOM05D007568 ORTHO05D009779 3.4e-32 142.1 67 100.0
A05p24570 Brassica napus HOM05D007568 ORTHO05D009779 9.8e-24 114.0 141 51.8
BcaB08g34629 Brassica carinata HOM05D007568 ORTHO05D009779 1.7e-23 113.2 113 50.4
C01p17360 Brassica napus HOM05D007568 ORTHO05D009779 1.7e-23 113.2 113 51.3
C07p00760 Brassica napus HOM05D007568 ORTHO05D009779 4.9e-23 111.7 107 46.7
C03p86040 Brassica napus HOM05D007568 ORTHO05D009779 7.0e-22 107.8 113 49.6
BolC6t36043H Brassica oleracea HOM05D007568 ORTHO05D009779 9.2e-22 107.5 109 45.9
BcaC01g06154 Brassica carinata HOM05D007568 ORTHO05D009779 1.2e-18 97.1 113 46.0
A07p20380 Brassica napus HOM05D007568 ORTHO05D009779 1.2e-18 97.1 102 44.1
C03p18690 Brassica napus HOM05D007568 ORTHO05D009779 1.6e-18 96.7 103 45.6
BolC3t14260H Brassica oleracea HOM05D007568 ORTHO05D009779 1.6e-18 96.7 103 45.6
C09p27130 Brassica napus HOM05D007568 ORTHO05D009779 3.6e-18 95.5 103 44.7
BolC9t55448H Brassica oleracea HOM05D007568 ORTHO05D009779 4.7e-18 95.1 103 45.6
A03p65180 Brassica napus HOM05D007568 ORTHO05D009779 6.2e-18 94.7 108 44.4
A02p32020 Brassica napus HOM05D007568 ORTHO05D009779 1.8e-17 93.2 104 46.2
BraA02t08213Z Brassica rapa HOM05D007568 ORTHO05D009779 1.8e-17 93.2 104 46.2
BcaB03g12898 Brassica carinata HOM05D007568 ORTHO05D009779 1.2e-16 90.5 57 75.4
BcaB06g25662 Brassica carinata HOM05D000353 ORTHO05D000174 1.2e-16 90.5 57 75.4
BcaC02g08832 Brassica carinata HOM05D007568 ORTHO05D009779 2.0e-16 89.7 78 51.3
BcaB08g37312 Brassica carinata HOM05D007568 ORTHO05D009779 4.4e-16 88.6 56 75.0
BolC4t24150H Brassica oleracea HOM05D000353 ORTHO05D000174 7.5e-16 87.8 108 42.6
A08p24970 Brassica napus HOM05D007568 ORTHO05D009779 9.9e-16 87.4 110 40.9
A03p66230 Brassica napus HOM05D007568 ORTHO05D009779 2.9e-15 85.9 108 41.7
BraA03t15678Z Brassica rapa HOM05D007568 ORTHO05D009779 2.9e-15 85.9 108 41.7
BcaB04g18026 Brassica carinata HOM05D007568 ORTHO05D009779 1.1e-14 84.0 112 40.2
BcaB02g11011 Brassica carinata HOM05D007568 ORTHO05D009779 1.9e-14 83.2 102 41.2
BcaB08g34681 Brassica carinata HOM05D009963 ORTHO05D009779 2.1e-13 79.7 110 36.4
C03p67580 Brassica napus HOM05D007568 ORTHO05D009779 2.3e-12 76.3 55 65.5
BcaC05g26582 Brassica carinata HOM05D007568 ORTHO05D009779 6.6e-12 74.7 142 38.0
BraA03t15576Z Brassica rapa HOM05D007568 ORTHO05D009779 1.5e-11 73.6 71 46.5
A07p36520 Brassica napus HOM05D007568 ORTHO05D009779 7.3e-11 71.2 181 28.2
BcaC01g01043 Brassica carinata HOM05D007568 ORTHO05D009779 2.8e-10 69.3 85 43.5
BolC4t26648H Brassica oleracea HOM05D007568 ORTHO05D009779 4.7e-10 68.6 101 40.6
BcaNung06627 Brassica carinata HOM05D007568 ORTHO05D009779 1.8e-09 66.6 72 41.7
BolC4t23434H Brassica oleracea HOM05D007568 ORTHO05D009779 1.8e-09 66.6 71 43.7
BcaB05g23080 Brassica carinata HOM05D009963 ORTHO05D013780 6.8e-09 64.7 109 33.0
C03p18140 Brassica napus HOM05D007568 ORTHO05D009779 2.6e-08 62.8 76 44.7
C04p17840 Brassica napus HOM05D007568 ORTHO05D014500 2.9e-07 59.3 108 37.0
A09p28960 Brassica napus HOM05D007568 ORTHO05D009779 4.2e-06 55.5 108 34.3
C01p49430 Brassica napus HOM05D007568 ORTHO05D009779 4.2e-06 55.5 103 33.0
BraA09t38460Z Brassica rapa HOM05D007568 ORTHO05D009779 4.2e-06 55.5 108 34.3
C04p26530 Brassica napus HOM05D000353 ORTHO05D000174 9.2e-06 54.3 108 34.3


User provided reference genes

Program Settings