Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49977 Brassica carinata HOM05D007502 ORTHO05D011692 1.1e-71 273.1 134 100.0
C01p30460 Brassica napus HOM05D007502 ORTHO05D011692 1.1e-71 273.1 134 100.0
BolC1t02989H Brassica oleracea HOM05D007502 ORTHO05D011692 1.1e-71 273.1 134 100.0
A01p24440 Brassica napus HOM05D007502 ORTHO05D011692 7.7e-68 260.4 134 94.8
BraA01t02357Z Brassica rapa HOM05D007502 ORTHO05D011692 2.9e-67 258.5 134 94.0
BcaB05g23165 Brassica carinata HOM05D007502 ORTHO05D011692 1.4e-56 223.0 130 86.2
Thhalv10011022m.g Eutrema salsugineum HOM05D007502 ORTHO05D011692 5.4e-53 211.1 128 79.7
AT3G49820 Arabidopsis thaliana HOM05D007502 ORTHO05D011692 2.2e-51 205.7 126 78.6
Sp5g12270 Schrenkiella parvula HOM05D007502 ORTHO05D011692 9.4e-50 200.3 133 79.7
AL5G29820 Arabidopsis lyrata HOM05D007502 ORTHO05D011692 1.1e-42 176.8 130 70.8
CARHR158890 Cardamine hirsuta HOM05D007502 ORTHO05D011692 5.6e-42 174.5 137 69.3
Carub.0005s1617 Capsella rubella HOM05D007502 ORTHO05D011692 4.7e-41 171.4 129 69.8
BraA06t26210Z Brassica rapa HOM05D007502 ORTHO05D011692 7.0e-29 131.0 130 57.7
A06p32780 Brassica napus HOM05D007502 ORTHO05D011692 3.5e-28 128.6 130 56.2
A02p44110 Brassica napus HOM05D007502 ORTHO05D011692 1.3e-27 126.7 138 52.9
BraA02t09334Z Brassica rapa HOM05D007502 ORTHO05D011692 1.3e-27 126.7 138 52.9
BolC2t12501H Brassica oleracea HOM05D007502 ORTHO05D011692 1.7e-27 126.3 138 52.9
C02p64370 Brassica napus HOM05D007502 ORTHO05D011692 1.5e-26 123.2 138 52.2
C03p59700 Brassica napus HOM05D007502 ORTHO05D011692 2.5e-26 122.5 135 54.1
BolC3t18232H Brassica oleracea HOM05D007502 ORTHO05D011692 2.5e-26 122.5 135 54.1
AL8G43640 Arabidopsis lyrata HOM05D007502 ORTHO05D011692 4.3e-26 121.7 140 52.1
Sp2g29000 Schrenkiella parvula HOM05D007502 ORTHO05D011692 2.1e-25 119.4 136 50.7
AT5G65925 Arabidopsis thaliana HOM05D007502 ORTHO05D011692 8.1e-25 117.5 138 52.2
BcaB02g09908 Brassica carinata HOM05D007502 ORTHO05D011692 1.1e-24 117.1 140 49.3
CARHR279940 Cardamine hirsuta HOM05D007502 ORTHO05D011692 8.9e-24 114.0 137 51.8
Thhalv10005632m.g Eutrema salsugineum HOM05D007502 ORTHO05D011692 2.0e-23 112.8 138 50.7
Carub.0008s2682 Capsella rubella HOM05D007502 ORTHO05D011692 7.5e-23 110.9 139 51.1
BcaC03g18361 Brassica carinata HOM05D007502 ORTHO05D011692 9.2e-21 104.0 114 53.5
Nitab4.5_0000142g0300 Nicotiana tabacum HOM05D001896 ORTHO05D001862 1.8e-08 63.2 120 36.7
CAN.G1075.51 Capsicum annuum HOM05D001896 ORTHO05D001862 4.4e-07 58.5 133 35.3
BcaC03g15504 Brassica carinata HOM05D007502 ORTHO05D011692 1.3e-06 57.0 78 44.9


User provided reference genes

Program Settings