Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49964 Brassica carinata HOM05D004041 ORTHO05D004564 1.1e-187 660.2 426 100.0
C01p30700 Brassica napus HOM05D004041 ORTHO05D004564 1.4e-67 261.2 358 50.8
C08p24610 Brassica napus HOM05D004041 ORTHO05D004564 2.6e-61 240.4 557 44.0
BcaC07g39425 Brassica carinata HOM05D004041 ORTHO05D004564 1.0e-60 238.4 547 44.6
BolC8t50077H Brassica oleracea HOM05D004041 ORTHO05D004564 2.9e-60 236.9 559 43.6
AL5G29450 Arabidopsis lyrata HOM05D004041 ORTHO05D004564 2.4e-54 217.2 603 41.1
Thhalv10010217m.g Eutrema salsugineum HOM05D004041 ORTHO05D004564 3.0e-49 200.3 611 43.7
Sp5g12500 Schrenkiella parvula HOM05D004041 ORTHO05D004564 3.1e-46 190.3 603 40.6
BraA06t24900Z Brassica rapa HOM05D004041 ORTHO05D004564 1.1e-43 181.8 552 41.1
A06p18110 Brassica napus HOM05D004041 ORTHO05D004564 3.2e-43 180.3 552 40.9
CARHR158630 Cardamine hirsuta HOM05D004041 ORTHO05D004564 4.2e-43 179.9 605 42.8
Aa31LG4G18100 Aethionema arabicum HOM05D004041 ORTHO05D004564 3.0e-41 173.7 135 72.6
BcaB01g00690 Brassica carinata HOM05D004041 ORTHO05D004564 4.3e-40 169.9 638 37.0
THA.LOC104799001 Tarenaya hassleriana HOM05D004041 ORTHO05D004564 3.7e-39 166.8 173 59.0
AT3G49601 Arabidopsis thaliana HOM05D004041 ORTHO05D004564 1.8e-38 164.5 600 41.2
THA.LOC109116738 Tarenaya hassleriana HOM05D004041 ORTHO05D004564 7.2e-35 152.5 126 66.7
Glyma.14G131900 Glycine max HOM05D004041 ORTHO05D004564 4.7e-34 149.8 138 60.9
Hund03240 Selenicereus undatus HOM05D004041 ORTHO05D004564 6.1e-34 149.4 190 52.1
VMungo1383G3608 Vigna mungo HOM05D004041 ORTHO05D004564 7.9e-34 149.1 138 59.4
Lj8C419G2 Lonicera japonica HOM05D004041 ORTHO05D004564 1.8e-33 147.9 139 62.6
Lj1g0018267 Lotus japonicus HOM05D004041 ORTHO05D004564 6.7e-33 146.0 190 50.0
Psat6g031640 Pisum sativum HOM05D004041 ORTHO05D004564 8.8e-33 145.6 131 62.6
Sabra06G0181500 Salix brachista HOM05D004041 ORTHO05D004564 8.8e-33 145.6 132 61.4
PGR119G2538 Punica granatum HOM05D004041 ORTHO05D004564 1.5e-32 144.8 186 48.9
GSVIVG01035595001 Vitis vinifera HOM05D004041 ORTHO05D004564 1.5e-32 144.8 192 50.0
ClCG08G012810 Citrullus lanatus HOM05D004041 ORTHO05D004564 2.0e-32 144.4 181 49.2
Eucgr.H02470 Eucalyptus grandis HOM05D004041 ORTHO05D004564 2.0e-32 144.4 137 59.1
Glyma.17G200600 Glycine max HOM05D004041 ORTHO05D004564 2.0e-32 144.4 138 58.7
Manes.03G046500 Manihot esculenta HOM05D004041 ORTHO05D004564 2.0e-32 144.4 182 51.6
MD08G1133100 Malus domestica HOM05D004041 ORTHO05D004564 2.6e-32 144.1 184 48.4
Phvul.001G088700 Phaseolus vulgaris HOM05D004041 ORTHO05D004564 2.6e-32 144.1 138 56.5
DCAR_004521 Daucus carota HOM05D004041 ORTHO05D004564 3.3e-32 143.7 161 55.3
MD15G1111100 Malus domestica HOM05D004041 ORTHO05D004564 3.3e-32 143.7 187 49.7
Sed0021561 Sechium edule HOM05D004041 ORTHO05D004564 3.3e-32 143.7 181 48.1
Lsat_1_v5_gn_4_74560 Lactuca sativa HOM05D004041 ORTHO05D004564 4.4e-32 143.3 141 60.3
CsaV3_2G031560 Cucumis sativus L. HOM05D004041 ORTHO05D004564 5.7e-32 142.9 181 49.7
arahy.Tifrunner.gnm1.ann1.1H4CIU Arachis hypogaea HOM05D004041 ORTHO05D004564 7.4e-32 142.5 187 48.7
Nitab4.5_0000288g0130 Nicotiana tabacum HOM05D004041 ORTHO05D004564 7.4e-32 142.5 155 55.5
Prupe.1G463200 Prunus persica HOM05D004041 ORTHO05D004564 7.4e-32 142.5 177 50.8
Ca_12887_v3 Cicer arietinum L. HOM05D004041 ORTHO05D004564 1.3e-31 141.7 162 53.7
HanXRQChr10g0299041 Helianthus annuus HOM05D004041 ORTHO05D004564 1.3e-31 141.7 155 56.1
Lalb_Chr23g0268921 Lupinus albus HOM05D004041 ORTHO05D004564 2.2e-31 141.0 261 38.3
Nitab4.5_0008752g0030 Nicotiana tabacum HOM05D004041 ORTHO05D004564 2.2e-31 141.0 155 56.1
TWI15G0012 Tripterygium wilfordii HOM05D004041 ORTHO05D004564 2.2e-31 141.0 183 50.8
PGSC0003DMG401029567 Solanum tuberosum HOM05D004041 ORTHO05D004564 2.8e-31 140.6 154 55.8
Solyc08g074440.4 Solanum lycopersicum HOM05D004041 ORTHO05D004564 3.7e-31 140.2 155 54.8
FvH4_2g30620 Fragaria vesca HOM05D004041 ORTHO05D004564 4.8e-31 139.8 138 58.7
FAN24G0669 Fragaria x ananassa HOM05D004041 ORTHO05D004564 4.8e-31 139.8 138 58.7
Phvul.006G038688 Phaseolus vulgaris HOM05D004041 ORTHO05D004564 4.8e-31 139.8 193 48.2
PSO541G4756 Papaver somniferum HOM05D004041 ORTHO05D004564 6.3e-31 139.4 132 60.6
Potri.006G233000 Populus trichocarpa HOM05D004041 ORTHO05D004564 6.3e-31 139.4 177 50.8
TWI60G0712 Tripterygium wilfordii HOM05D004041 ORTHO05D004564 6.3e-31 139.4 137 59.9
Lalb_Chr11g0064071 Lupinus albus HOM05D004041 ORTHO05D004564 1.8e-30 137.9 158 51.9
RcHm_v2.0_Chr6g0312381 Rosa chinensis HOM05D004041 ORTHO05D004564 1.8e-30 137.9 184 46.7
Sc06g0000040 Simmondsia chinensis HOM05D004041 ORTHO05D004564 1.8e-30 137.9 166 50.0
Sc06g0001360 Simmondsia chinensis HOM05D004041 ORTHO05D004564 1.8e-30 137.9 166 50.0
Sopen08g023080 Solanum pennellii HOM05D004041 ORTHO05D004564 1.8e-30 137.9 154 54.5
Ciclev10007432m.g Citrus clementina HOM05D004041 ORTHO05D004564 4.1e-30 136.7 189 46.6
Peaxi162Scf00213g01515 Petunia axillaris HOM05D004041 ORTHO05D004564 5.3e-30 136.3 186 47.8
Atru.chr4.1391 Acer truncatum HOM05D004041 ORTHO05D004564 7.0e-30 136.0 138 57.2
EL10Ac2g03659 Beta vulgaris HOM05D004041 ORTHO05D004564 7.0e-30 136.0 179 51.4
Cc03_g09420 Coffea canephora HOM05D004041 ORTHO05D004564 7.0e-30 136.0 141 56.0
Ah.10g033610 Amaranthus hybridus HOM05D004041 ORTHO05D004564 2.6e-29 134.0 170 51.2
CAN.G195.14 Capsicum annuum HOM05D004041 ORTHO05D004564 2.6e-29 134.0 156 53.8
SalBow8G3032 Salvia bowleyana HOM05D004041 ORTHO05D004564 3.5e-29 133.7 136 57.4
FAN15G2764 Fragaria x ananassa HOM05D004041 ORTHO05D004564 5.9e-29 132.9 185 49.2
FAN27G0182 Fragaria x ananassa HOM05D004041 ORTHO05D004564 5.9e-29 132.9 185 49.2
AUR62020692 Chenopodium quinoa HOM05D004041 ORTHO05D004564 7.7e-29 132.5 183 49.2
CSS0017741 Camellia sinensis var. sinensis HOM05D004041 ORTHO05D004564 1.0e-28 132.1 274 37.6
FAN20G2913 Fragaria x ananassa HOM05D004041 ORTHO05D004564 1.3e-28 131.7 185 49.2
Carub.0005s1594 Capsella rubella HOM05D004041 ORTHO05D004564 1.7e-28 131.3 602 37.9
Aqoxy7G02570 Aquilegia oxysepala HOM05D004041 ORTHO05D004564 2.2e-28 131.0 165 49.7
AUR62028033 Chenopodium quinoa HOM05D004041 ORTHO05D004564 2.2e-28 131.0 198 46.5
COL.COLO4_09287 Corchorus olitorius HOM05D004041 ORTHO05D004564 2.2e-28 131.0 139 58.3
BolC3t18797H Brassica oleracea HOM05D004041 ORTHO05D004564 3.8e-28 130.2 95 76.8
QL12p024601 Quercus lobata HOM05D004041 ORTHO05D004564 3.8e-28 130.2 185 47.6
CiPaw.07G215400 Carya illinoinensis HOM05D004041 ORTHO05D004564 5.0e-28 129.8 136 52.9
Duzib128G1534 Durio zibethinus HOM05D004041 ORTHO05D004564 5.0e-28 129.8 139 57.6
TAR383G1094 Trochodendron aralioides HOM05D004041 ORTHO05D004564 8.5e-28 129.0 178 47.2
CiPaw.07G050600 Carya illinoinensis HOM05D004041 ORTHO05D004564 2.5e-27 127.5 187 46.0
Actinidia12476 Actinidia chinensis HOM05D004041 ORTHO05D004564 5.5e-27 126.3 280 35.7
Cpa.g.sc117.15 Carica papaya HOM05D004041 ORTHO05D004564 5.5e-27 126.3 104 66.3
Gorai.010G210300 Gossypium raimondii HOM05D004041 ORTHO05D004564 7.2e-27 125.9 140 55.7
Gohir.D06G179700 Gossypium hirsutum HOM05D004041 ORTHO05D004564 9.4e-27 125.6 140 55.0
MBI11_g09070_MAGBIO Magnolia biondii HOM05D004041 ORTHO05D004564 9.4e-27 125.6 157 50.3
Gohir.A06G171600 Gossypium hirsutum HOM05D004041 ORTHO05D004564 1.2e-26 125.2 140 55.0
Thecc.10G127600 Theobroma cacao HOM05D004041 ORTHO05D004564 1.2e-26 125.2 139 56.1
Duzib106G1246 Durio zibethinus HOM05D004041 ORTHO05D004564 2.1e-26 124.4 139 55.4
Migut.E01401 Erythranthe guttata HOM05D004041 ORTHO05D004564 2.7e-26 124.0 200 44.0
ECA234G4028 Erigeron canadensis HOM05D004041 ORTHO05D004564 3.6e-26 123.6 172 48.8
Mapoly0057s0059 Marchantia polymorpha HOM05D004041 ORTHO05D004564 3.6e-26 123.6 159 47.8
SEGI_30814 Sequoiadendron giganteum HOM05D004041 ORTHO05D004564 3.6e-26 123.6 153 51.0
Lj8C415T2 Lonicera japonica HOM05D004041 ORTHO05D004564 8.0e-26 122.5 104 65.4
PSO210G2134 Papaver somniferum HOM05D004041 ORTHO05D004564 1.0e-25 122.1 132 54.5
CSS0020148 Camellia sinensis var. sinensis HOM05D004041 ORTHO05D004564 1.8e-25 121.3 113 57.5
Thecc.10G128300 Theobroma cacao HOM05D004041 ORTHO05D004564 1.8e-25 121.3 136 55.9
Glyma.11G174282 Glycine max HOM05D004041 ORTHO05D004564 2.3e-25 120.9 103 62.1
Gorai.010G210000 Gossypium raimondii HOM05D004041 ORTHO05D004564 6.7e-25 119.4 140 52.9
Medtr1g010100 Medicago truncatula HOM05D004041 ORTHO05D004564 6.7e-25 119.4 111 60.4
Gohir.D06G179400 Gossypium hirsutum HOM05D004041 ORTHO05D004564 8.8e-25 119.0 140 52.9
TPR.G10377 Trifolium pratense HOM05D004041 ORTHO05D004564 8.8e-25 119.0 109 59.6
AagrBONN_evm.TU.Sc2ySwM_344.5195 Anthoceros agrestis HOM05D004041 ORTHO05D004564 1.1e-24 118.6 151 45.7
PSO832G4585 Papaver somniferum HOM05D004041 ORTHO05D004564 1.1e-24 118.6 132 53.8
TPR.G20436 Trifolium pratense HOM05D004041 ORTHO05D004564 1.1e-24 118.6 102 62.7
vmacro00640 Vaccinium macrocarpon HOM05D004041 ORTHO05D004564 1.1e-24 118.6 107 60.7
Nn5g27656 Nelumbo nucifera HOM05D004041 ORTHO05D004564 1.5e-24 118.2 130 54.6
Thecc.10G128100 Theobroma cacao HOM05D004041 ORTHO05D004564 1.5e-24 118.2 136 55.9
Pp3c3_10000 Physcomitrium patens HOM05D004041 ORTHO05D004564 2.0e-24 117.9 159 46.5
Nitab4.5_0000648g0040 Nicotiana tabacum HOM05D004041 ORTHO05D004564 2.6e-24 117.5 143 51.0
SGA_v2.0_scaffold121G33039 Striga asiatica HOM05D003985 ORTHO05D005253 3.3e-24 117.1 185 43.8
Cpa.g.c48129 Carica papaya HOM05D004041 ORTHO05D004564 4.8e-23 113.2 79 73.4
Zm00001eb344480 Zea mays HOM05D004041 ORTHO05D004564 6.3e-23 112.8 145 51.0
Oeu026036.1 Olea europaea HOM05D004041 ORTHO05D004564 1.1e-22 112.1 103 59.2
ATR0665G601 Amborella trichopoda HOM05D004041 ORTHO05D004564 1.4e-22 111.7 158 46.2
CDE07G1163 Ceratophyllum demersum HOM05D004041 ORTHO05D004564 3.1e-22 110.5 183 42.6
RcHm_v2.0_Chr4g0410401 Rosa chinensis HOM05D004041 ORTHO05D004564 3.8e-20 103.6 79 65.8
Nn8g41252 Nelumbo nucifera HOM05D004041 ORTHO05D004564 5.0e-20 103.2 174 42.0
BcaC01g02423 Brassica carinata HOM05D004041 ORTHO05D004564 1.5e-19 101.7 68 79.4
Ah.11g044190 Amaranthus hybridus HOM05D004041 ORTHO05D004564 1.9e-19 101.3 104 56.7
CBR_g88579 Chara braunii HOM05D004041 ORTHO05D004564 1.9e-19 101.3 168 39.9
Mapoly0057s0051 Marchantia polymorpha HOM05D004041 ORTHO05D004564 1.6e-18 98.2 128 45.3
Zm00001eb204710 Zea mays HOM05D004041 ORTHO05D004564 2.1e-18 97.8 172 41.3
Zm00001eb204730 Zea mays HOM05D004041 ORTHO05D004564 2.3e-17 94.4 105 53.3
Migut.A00845 Erythranthe guttata HOM05D004041 ORTHO05D004564 4.0e-17 93.6 126 50.0
Migut.A00847 Erythranthe guttata HOM05D004041 ORTHO05D004564 4.0e-17 93.6 126 50.0
Zm00001eb204810 Zea mays HOM05D004041 ORTHO05D004564 4.0e-17 93.6 103 53.4
MCO09G628 Micromonas commoda HOM05D004041 ORTHO05D004564 5.2e-17 93.2 125 45.6
TAR626G0117 Trochodendron aralioides HOM05D002987 ORTHO05D003359 5.2e-17 93.2 90 58.9
TPR.G211 Trifolium pratense HOM05D004041 ORTHO05D004564 6.8e-17 92.8 96 54.2
Zm00001eb204800 Zea mays HOM05D004041 ORTHO05D004564 1.2e-16 92.0 108 52.8
Zm00001eb204750 Zea mays HOM05D004041 ORTHO05D004564 2.6e-16 90.9 100 53.0
CANSAT21G2467 Cannabis sativa HOM05D004041 ORTHO05D004564 3.4e-16 90.5 128 47.7
Zm00001eb204790 Zea mays HOM05D004041 ORTHO05D004564 7.5e-16 89.4 109 50.5
Ca_11409_v3 Cicer arietinum L. HOM05D004041 ORTHO05D004564 1.3e-15 88.6 102 52.0
ATR0665G238 Amborella trichopoda HOM05D004041 ORTHO05D004564 4.8e-15 86.7 98 50.0
Rhsim07G0241300 Rhododendron simsii HOM05D004041 ORTHO05D004564 1.1e-14 85.5 97 49.5
Zm00001eb204830 Zea mays HOM05D004041 ORTHO05D004564 1.8e-14 84.7 100 49.0
Zm00001eb204770 Zea mays HOM05D004041 ORTHO05D004564 2.4e-14 84.3 103 51.5
Ca_11411_v3 Cicer arietinum L. HOM05D004041 ORTHO05D004564 3.1e-14 84.0 102 50.0
Gohir.A06G171302 Gossypium hirsutum HOM05D004041 ORTHO05D004564 5.4e-14 83.2 120 48.3
Zm00001eb204820 Zea mays HOM05D004041 ORTHO05D004564 5.4e-14 83.2 105 50.5
Dinv37476 Davidia involucrata HOM05D000079 ORTHO05D000211 9.1e-14 82.4 97 53.6
RhsimUnG0236200 Rhododendron simsii HOM05D004041 ORTHO05D004564 9.1e-14 82.4 97 49.5
Dinv09449 Davidia involucrata HOM05D003985 ORTHO05D005253 3.5e-13 80.5 87 55.2
PRCOL_00006922 Prasinoderma coloniale HOM05D004041 ORTHO05D004564 3.5e-13 80.5 101 48.5
Mapoly0018s0007 Marchantia polymorpha HOM05D004041 ORTHO05D004564 3.8e-12 77.0 139 40.3
SalBow7G2142 Salvia bowleyana HOM05D004041 ORTHO05D004564 3.8e-12 77.0 102 45.1
Gohir.D06G179300 Gossypium hirsutum HOM05D004041 ORTHO05D004564 2.5e-11 74.3 91 51.6
TPR.G14045 Trifolium pratense HOM05D004041 ORTHO05D004564 5.2e-09 66.6 52 65.4
SGA_v2.0_scaffold7G03771 Striga asiatica HOM05D004041 ORTHO05D004564 8.8e-09 65.9 68 52.9
Manes.07G111004 Manihot esculenta HOM05D004041 ORTHO05D004564 1.5e-08 65.1 89 42.7
Zm00001eb204760 Zea mays HOM05D004041 ORTHO05D004564 9.8e-08 62.4 104 44.2
Gorai.010G209300 Gossypium raimondii HOM05D004041 ORTHO05D004564 3.7e-07 60.5 84 48.8
Cre09.g409200 Chlamydomonas reinhardtii HOM05D004041 ORTHO05D004564 6.3e-07 59.7 170 37.1
Gorai.010G209900 Gossypium raimondii HOM05D004041 ORTHO05D004564 1.1e-06 58.9 86 47.7
Zm00001eb357810 Zea mays HOM05D004041 ORTHO05D004564 2.4e-06 57.8 102 34.3
Dinv19111 Davidia involucrata HOM05D004041 ORTHO05D004564 5.4e-06 56.6 82 48.8


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